CK936512

Overview
NameCK936512
Unique NameCK936512
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length740
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_MYCVP (Urease accessory protein ureG OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=ureG PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 2.754e-45
Identity = 83/139 (59.71%), Postives = 110/139 (79.14%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEEL-SNLFKADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            +G+GGPVG+GKTAL+ ALC+ LRD+ SLA +TNDI+T ED +FL R+  LP++RI AV+TGGCPH AIR+DI+ NL  +++L +     DL+L ESGGDNL A FS  L D  I++I+V+GGDK+PRKGGPG+T +DLL
Sbjct:   29 IGVGGPVGSGKTALVAALCRQLRDELSLAVLTNDIYTTEDADFLRRHAVLPDDRIAAVQTGGCPHTAIRDDITANLDAIDDLIAGHDDLDLILVESGGDNLTATFSSGLVDVQIFVIDVAGGDKVPRKGGPGVTFSDLL 167          

HSP 2 Score: 27.335 bits (59), Expect = 2.754e-45
Identity = 12/21 (57.14%), Postives = 14/21 (66.67%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPF 659
            +GADL VM RDA  +R   PF
Sbjct:  178 VGADLEVMRRDAAAVRGDRPF 198          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_RHOS5 (Urease accessory protein ureG OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=ureG PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 6.103e-45
Identity = 84/139 (60.43%), Postives = 99/139 (71.22%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLF-KADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            VGIGGPVG GKT L   LC  L  + S+A +TNDI+T+ED E LMR   LP ERIR VETGGCPH AIRED SINL  + +L   F   DL+L ESGGDNLAA FS ELAD  +Y+I+ + G  IPRK GPG+ ++DLL
Sbjct:    8 VGIGGPVGAGKTTLTEKLCAALAHRCSMAVITNDIYTREDAEALMRAQVLPAERIRGVETGGCPHTAIREDASINLAAVADLRRAFPDLDLILIESGGDNLAATFSPELADLTLYVIDTAAGQDIPRKRGPGLARSDLL 146          

HSP 2 Score: 35.4242 bits (80), Expect = 6.103e-45
Identity = 15/36 (41.67%), Postives = 22/36 (61.11%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIV 704
            +G DL ++E D    R   P++ AQ++ G GV EIV
Sbjct:  157 VGVDLRLLEEDTKTARGRRPYVMAQLRRGAGVAEIV 192          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_BACC1 (Urease accessory protein ureG OS=Bacillus cereus (strain ATCC 10987) GN=ureG PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 6.105e-45
Identity = 82/141 (58.16%), Postives = 104/141 (73.76%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEEL----SNLFKADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADL 591
            +GIGGPVG GKT L+  L K L   Y +AA+TNDI+TKED + L++ G LPE+RI  VETGGCPH AIRED S+N   +EEL    +NL   D++  ESGGDNLAA FS EL D+ IYII+V+ G+KIPRKGG G+ ++D+
Sbjct:    7 IGIGGPVGAGKTMLVEKLTKHLNTDYEIAAITNDIYTKEDAKILLKTGVLPEDRIIGVETGGCPHTAIREDASMNFEAIEELMIRHNNL---DIIFIESGGDNLAATFSPELVDFSIYIIDVAQGEKIPRKGGQGMIKSDV 144          

HSP 2 Score: 37.7354 bits (86), Expect = 6.105e-45
Identity = 16/41 (39.02%), Postives = 25/41 (60.98%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHILQ 719
            +GADL VME+D    R   P+ F  +K   G++E++N + Q
Sbjct:  156 VGADLGVMEQDTKHYRHNKPYFFTNLKDEEGLQELINWMRQ 196          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_OPITP (Urease accessory protein ureG OS=Opitutus terrae (strain DSM 11246 / PB90-1) GN=ureG PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.036e-44
Identity = 87/148 (58.78%), Postives = 103/148 (69.59%), Query Frame = 1
Query:  154 RNFNERAFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLF-KADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            R    RA  VGIGGPVG+GKT L L LC+ LR++ S+A VTNDI+  ED +FL+R  ALP  RI  VETGGCPH AIR+D ++N      L   F + DLLL ESGGDNL A FS EL D  IY+I+V+ GDKIPRKGGP I  +DLL
Sbjct:    2 RTTTRRAPRVGIGGPVGSGKTMLCLKLCQRLRERLSMAVVTNDIYCSEDAQFLIRQSALPAARIAGVETGGCPHTAIRDDTTMNEQACRALEATFPELDLLLVESGGDNLTATFSPELVDAFIYVIDVAEGDKIPRKGGPAIRFSDLL 149          

HSP 2 Score: 33.4982 bits (75), Expect = 1.036e-44
Identity = 14/36 (38.89%), Postives = 21/36 (58.33%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIV 704
            +GADL VM RDA   R G PF+   +K    ++ ++
Sbjct:  160 VGADLEVMARDATAQRGGRPFLLCDLKREHNLDAVI 195          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_LYSSC (Urease accessory protein ureG OS=Lysinibacillus sphaericus (strain C3-41) GN=ureG PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 1.036e-44
Identity = 76/139 (54.68%), Postives = 104/139 (74.82%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFK-ADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            +GIGGPVG+GKT+L+  L + + + Y +A +TNDI+T+ED ++L+ NG L EERI  VETGGCPH AIRED S+N   +++L+  FK  D++  ESGGDNL+A FS EL    IY+I+V+ G  IPRKGGP +T++DLL
Sbjct:    6 IGIGGPVGSGKTSLVDQLTRVMHEHYHVAVITNDIYTREDAQYLITNGVLAEERIIGVETGGCPHTAIREDASMNFAAIDDLTKRFKNLDIIFIESGGDNLSATFSPELVHGYIYVIDVAEGQDIPRKGGPALTRSDLL 144          

HSP 2 Score: 38.891 bits (89), Expect = 1.036e-44
Identity = 16/39 (41.03%), Postives = 26/39 (66.67%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHI 713
            +G DL +M++D  +MR G P+IFA V+    V+++V  I
Sbjct:  155 VGVDLDIMDQDVKKMRGGRPYIFADVRSQTNVDKVVEWI 193          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_RHOS4 (Urease accessory protein ureG OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=ureG PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.037e-44
Identity = 85/139 (61.15%), Postives = 99/139 (71.22%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLF-KADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            VGIGGPVG GKT L   LC  L  + S+A +TNDI+T+ED E LMR   LP ERIR VETGGCPH AIRED SINL  + +L   F   DL+L ESGGDNLAA FS ELAD  IY+I+ + G  IPRK GPG+ ++DLL
Sbjct:    8 VGIGGPVGAGKTTLTEKLCAALAHRCSMAVITNDIYTREDAEALMRAQVLPAERIRGVETGGCPHTAIREDASINLAAVADLRRTFPDLDLILIESGGDNLAATFSPELADLTIYVIDTAAGQDIPRKRGPGLARSDLL 146          

HSP 2 Score: 33.8834 bits (76), Expect = 1.037e-44
Identity = 15/36 (41.67%), Postives = 23/36 (63.89%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIV 704
            +G DLA +E D    R   P++ A+++ G+GVE IV
Sbjct:  157 VGVDLARLEADTQAARGQRPYVMARMRAGVGVEAIV 192          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_RHOS1 (Urease accessory protein ureG OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=ureG PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.037e-44
Identity = 85/139 (61.15%), Postives = 99/139 (71.22%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLF-KADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            VGIGGPVG GKT L   LC  L  + S+A +TNDI+T+ED E LMR   LP ERIR VETGGCPH AIRED SINL  + +L   F   DL+L ESGGDNLAA FS ELAD  IY+I+ + G  IPRK GPG+ ++DLL
Sbjct:    8 VGIGGPVGAGKTTLTEKLCAALAHRCSMAVITNDIYTREDAEALMRAQVLPAERIRGVETGGCPHTAIREDASINLAAVADLRRTFPDLDLILIESGGDNLAATFSPELADLTIYVIDTAAGQDIPRKRGPGLARSDLL 146          

HSP 2 Score: 33.8834 bits (76), Expect = 1.037e-44
Identity = 15/36 (41.67%), Postives = 23/36 (63.89%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIV 704
            +G DLA +E D    R   P++ A+++ G+GVE IV
Sbjct:  157 VGVDLARLEADTQAARGQRPYVMARMRAGVGVEAIV 192          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_STRCO (Urease accessory protein ureG OS=Streptomyces coelicolor GN=ureG PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.850e-44
Identity = 93/169 (55.03%), Postives = 118/169 (69.82%), Query Frame = 1
Query:   91 HSHEPIYSPGYFSRRAPPILSRNFNERAFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSN-LFKADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            H HE   +    +RR       + + RA  +G+GGPVG+GKTA + ALC+ LR + SLA VTNDI+T+ED EFL+R   LP ERI AVETG CPH AIR+DIS NL  +E+L + +   DL+L ESGGDNL A FSR L D  +++I+V+GGD IPRKGGPG+  ADLL
Sbjct:    5 HHHESAAAVSADARRP------DGSRRALRIGLGGPVGSGKTATVAALCRALRAELSLAVVTNDIYTREDAEFLLREAVLPPERITAVETGACPHTAIRDDISANLEAVEDLEDEVGPLDLVLVESGGDNLTATFSRGLVDAQVFVIDVAGGDDIPRKGGPGVATADLL 167          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_RHOSK (Urease accessory protein ureG OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=ureG PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 3.896e-44
Identity = 85/139 (61.15%), Postives = 99/139 (71.22%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLF-KADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            VGIGGPVG GKT L   LC  L  + S+A +TNDI+T+ED E LMR   LP ERIR VETGGCPH AIRED SINL  + +L   F   DL+L ESGGDNLAA FS ELAD  IY+I+ + G  IPRK GPG+ ++DLL
Sbjct:    8 VGIGGPVGAGKTTLTEKLCAALAHRCSMAVITNDIYTREDAEALMRAQVLPAERIRGVETGGCPHTAIREDASINLAAVADLRRTFPDLDLILIESGGDNLAATFSPELADLTIYVIDTAAGQDIPRKRGPGLARSDLL 146          

HSP 2 Score: 31.9574 bits (71), Expect = 3.896e-44
Identity = 14/36 (38.89%), Postives = 23/36 (63.89%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIV 704
            +G +LA +E D    R   P++ A+++ G+GVE IV
Sbjct:  157 VGVNLARLEADTQAARGQRPYVMARMRAGVGVEAIV 192          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_CLOPH (Urease accessory protein ureG OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=ureG PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 3.897e-44
Identity = 81/138 (58.70%), Postives = 102/138 (73.91%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLF-KADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADL 591
            +G+GGPVG GKT L+  L +++ D YS+A VTNDI+TKED +FLM NG LP +RI  VETGGCPH AIRED S+N   + EL        ++  ESGGDNLAA FS ELAD+ IYII+V+ G+KIPRKGG G+ ++DL
Sbjct:    6 IGVGGPVGAGKTMLVEKLTRYMSDDYSMAVVTNDIYTKEDAKFLMENGVLPSDRIIGVETGGCPHTAIREDASMNFAAVNELVQRHPDVQIVFVESGGDNLAATFSPELADFSIYIIDVAQGEKIPRKGGQGMIKSDL 143          

HSP 2 Score: 31.5722 bits (70), Expect = 3.897e-44
Identity = 12/39 (30.77%), Postives = 23/39 (58.97%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHI 713
            +GA+L +M  D  + R   PF+F  +K   G+ ++++ I
Sbjct:  155 VGANLDIMASDTRKFRGNKPFVFTNLKKDEGLPDVISWI 193          
The following BLAST results are available for this feature:
BLAST of CK936512 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 253
Match NameE-valueIdentityDescription
UREG_MYCVP2.754e-4559.71Urease accessory protein ureG OS=Mycobacterium van... [more]
UREG_RHOS56.103e-4560.43Urease accessory protein ureG OS=Rhodobacter sphae... [more]
UREG_BACC16.105e-4558.16Urease accessory protein ureG OS=Bacillus cereus (... [more]
UREG_OPITP1.036e-4458.78Urease accessory protein ureG OS=Opitutus terrae (... [more]
UREG_LYSSC1.036e-4454.68Urease accessory protein ureG OS=Lysinibacillus sp... [more]
UREG_RHOS41.037e-4461.15Urease accessory protein ureG OS=Rhodobacter sphae... [more]
UREG_RHOS11.037e-4461.15Urease accessory protein ureG OS=Rhodobacter sphae... [more]
UREG_STRCO2.850e-4455.03Urease accessory protein ureG OS=Streptomyces coel... [more]
UREG_RHOSK3.896e-4461.15Urease accessory protein ureG OS=Rhodobacter sphae... [more]
UREG_CLOPH3.897e-4458.70Urease accessory protein ureG OS=Clostridium phyto... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004521_E09 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0001_IVF_E09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936512 ID=CK936512; Name=CK936512; organism=Citrus sinensis; type=EST; length=740bp
ACCCATGAAAAAAATCATGGTGATTCAACAGCAACATCATGGGTGGGGTC
AGATGGGAGGGTGTATCATAGCCATGATGGACTGGCGCCACACTCGCACG
AACCCATTTACTCTCCAGGCTATTTCAGCAGAAGAGCTCCGCCTATTCTC
AGCAGAAATTTCAATGAGAGAGCTTTTACCGTTGGCATTGGTGGCCCTGT
TGGTACTGGGAAAACAGCTTTAATGCTGGCTTTGTGTAAATTCTTGCGGG
ACAAGTACAGTCTTGCAGCTGTCACAAATGATATTTTCACAAAAGAAGAT
GGTGAATTCCTGATGCGGAATGGTGCTCTGCCTGAGGAGAGAATACGTGC
TGTGGAAACAGGTGGATGTCCTCATGCTGCAATTCGTGAAGACATCAGCA
TCAATCTGGGCCCTCTCGAGGAACTTTCTAACTTGTTCAAAGCAGACCTA
CTTCTTTGCGAATCTGGGGGAGATAATTTAGCTGCCAACTTCAGCAGGGA
ACTTGCAGACTATATCATTTATATAATAAACGTTTCTGGTGGTGATAAAA
TTCCTCGGAAAGGTGGCCCAGGCATCACCCAAGCTGACCTTCTGCAATAG
GAGCTGACTTAGCAGTAATGGAGCGTGATGCACTCCGGATGCGTGATGGA
GGGCCTTTTATCTTCGCTCAGGTCAAGCATGGGCTTGGTGTGGAGGAAAT
AGTGAATCACATTTTACAGGCTTGGGAAGCANNNNCAGGG
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