CK936512

Overview
NameCK936512
Unique NameCK936512
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length740
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG1_SACEN (Urease accessory protein ureG 1 OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=ureG1 PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 5.063e-44
Identity = 84/143 (58.74%), Postives = 108/143 (75.52%), Query Frame = 1
Query:  169 RAFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFKA-DLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            RAF +GIGGPVG+GKTAL  ALC+ L  + +LA VTNDI+T ED +FL R G L  +RI AV+TG CPH AIR+DI+ NL  +E+L       +L++ ESGGDNL A FSR LAD  +++++V+GGDK+PRKGGPG+T ADLL
Sbjct:   45 RAFRLGIGGPVGSGKTALTAALCRALGSEVNLAVVTNDIYTTEDADFLRRAGVLDTDRIEAVQTGACPHTAIRDDITANLDAVEKLEERHPGLELVIVESGGDNLTAVFSRGLADSQVFVVDVAGGDKVPRKGGPGVTTADLL 187          

HSP 2 Score: 26.1794 bits (56), Expect = 5.063e-44
Identity = 13/22 (59.09%), Postives = 15/22 (68.18%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFI 662
            +GAD+AVM  DA RMR   P I
Sbjct:  198 VGADMAVMVADAHRMRGELPVI 219          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_FRASC (Urease accessory protein ureG OS=Frankia sp. (strain CcI3) GN=ureG PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 7.150e-43
Identity = 83/143 (58.04%), Postives = 106/143 (74.13%), Query Frame = 1
Query:  169 RAFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEEL-SNLFKADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            RA  +G+GGPVG+GKTAL+ ALC+ L     +  VTNDI+T ED +FL R G L  ERIRAVETG CPH AIR+DI+ NL  +E+L ++    DL+L ESGGDNL A FS  L D  I++++V+GGDK+PRKGGPG+T +DLL
Sbjct:   29 RAPRIGVGGPVGSGKTALVAALCRALSSSLRIGVVTNDIYTTEDADFLRRAGVLDPERIRAVETGCCPHTAIRDDITANLDMVEDLEADTGPLDLVLVESGGDNLTATFSYGLIDRQIFVVDVAGGDKVPRKGGPGVTGSDLL 171          

HSP 2 Score: 27.335 bits (59), Expect = 7.150e-43
Identity = 12/26 (46.15%), Postives = 15/26 (57.69%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQV 674
            +GADL VM RDA   R   P +F  +
Sbjct:  182 VGADLDVMARDATAARGARPVVFTSL 207          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_JANSC (Urease accessory protein ureG OS=Jannaschia sp. (strain CCS1) GN=ureG PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 7.172e-43
Identity = 83/139 (59.71%), Postives = 99/139 (71.22%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEEL-SNLFKADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            VGIGGPVG GKT L   L + +   YS+A +TNDI+T ED EFL+R   LP ERIR VETGGCPH AIRED SINL  + E  + L   D++  ESGGDNLAA FS ELAD  IY+I+ + G  IPRK GPG+T++DLL
Sbjct:   10 VGIGGPVGAGKTTLTAELARAMGQAYSVAVITNDIYTSEDAEFLLRAQVLPAERIRGVETGGCPHTAIREDASINLAAIAEFRTRLPDLDVIFIESGGDNLAATFSPELADLTIYVIDTAAGQDIPRKKGPGLTRSDLL 148          

HSP 2 Score: 28.8758 bits (63), Expect = 7.172e-43
Identity = 13/39 (33.33%), Postives = 20/39 (51.28%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHI 713
            +G D+A +E D    R    ++   ++ G GV EIV  I
Sbjct:  159 VGVDVAQLEADTRAARGRRAYVMGSLREGRGVPEIVQFI 197          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_FRAAA (Urease accessory protein ureG OS=Frankia alni (strain ACN14a) GN=ureG PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.217e-42
Identity = 83/143 (58.04%), Postives = 106/143 (74.13%), Query Frame = 1
Query:  169 RAFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEEL-SNLFKADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            RA  +G+GGPVG+GKTAL+ ALC+ L     L  VTNDI+T ED +FL R G L  +RIRAVETG CPH AIR+DI+ NL  +E+L ++    DL+L ESGGDNL A FS  L D  I++++V+GGDK+PRKGGPG+T +DLL
Sbjct:    5 RAPRIGVGGPVGSGKTALVAALCRSLAPSLRLGVVTNDIYTTEDADFLRRAGVLDPQRIRAVETGCCPHTAIRDDITANLDTVEDLEADTGPLDLVLVESGGDNLTATFSYGLIDRQIFVVDVAGGDKVPRKGGPGVTLSDLL 147          

HSP 2 Score: 26.9498 bits (58), Expect = 1.217e-42
Identity = 12/26 (46.15%), Postives = 15/26 (57.69%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQV 674
            +GADL VM RDA   R   P +F  +
Sbjct:  158 VGADLGVMARDAAAARGPRPVLFTSL 183          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_BACSB (Urease accessory protein ureG OS=Bacillus sp. (strain TB-90) GN=ureG PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 1.218e-42
Identity = 76/138 (55.07%), Postives = 101/138 (73.19%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLF-KADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADL 591
            +GIGGPVG GKT L+  L + +  + S+A VTNDI+TKED +FL+++G LP +R+  VETGGCPH AIRED S+N   ++EL       +L+  ESGGDNLAA FS EL D+ IYII+V+ G+KIPRKGG G+ ++ L
Sbjct:    6 IGIGGPVGAGKTMLVEKLTRAMHKELSIAVVTNDIYTKEDAQFLLKHGVLPADRVIGVETGGCPHTAIREDASMNFPAIDELKERHPDLELIFIESGGDNLAATFSPELVDFSIYIIDVAQGEKIPRKGGQGMIKSVL 143          

HSP 2 Score: 37.7354 bits (86), Expect = 1.218e-42
Identity = 17/39 (43.59%), Postives = 24/39 (61.54%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHI 713
            +GA L VMERD L  R   P+IF  +K  +G+ E++  I
Sbjct:  155 VGASLEVMERDTLAARGDKPYIFTNLKDEIGLAEVLEWI 193          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_PROM2 (Urease accessory protein ureG OS=Prochlorococcus marinus (strain MIT 9215) GN=ureG PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.121e-40
Identity = 83/139 (59.71%), Postives = 101/139 (72.66%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFK-ADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            VG+ GPVG+GKTAL+  LC  L+  Y +A VTNDI+TKED  FL+    L E RI  VETGGCPH AIRED S+N   + +L N +   D +  ESGGDNLA++FS EL D  IY+I+VS GDKIPRKGGPGIT++DLL
Sbjct:    7 VGVAGPVGSGKTALLETLCLSLKKNYEIAVVTNDIYTKEDANFLINKKVLEEGRIIGVETGGCPHTAIREDCSLNKNAVLDLENKYNPLDFVFVESGGDNLASSFSPELVDLSIYVIDVSAGDKIPRKGGPGITRSDLL 145          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_MICLC (Urease accessory protein ureG OS=Micrococcus luteus (strain ATCC 4698 / IFO 3333 / NCTC 2665) GN=ureG PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 5.363e-40
Identity = 75/138 (54.35%), Postives = 99/138 (71.74%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLF-KADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADL 591
            +GIGGPVG GKT L+  L + + ++ S+AA+TNDI+T ED + L R   LPEERI  +ETGGCPH AIRED S+N   +E+L   F    ++  ESGGDNL+A FS EL D+ IYII+V+ G+KIPRK G G+ ++DL
Sbjct:    6 IGIGGPVGAGKTQLVERLTRAMSEEISMAAITNDIYTIEDAKILSRTSVLPEERIVGIETGGCPHTAIREDTSMNEAAIEQLKARFPDLQVIFVESGGDNLSATFSPELVDFSIYIIDVAQGEKIPRKAGQGMIKSDL 143          

HSP 2 Score: 32.3426 bits (72), Expect = 5.363e-40
Identity = 15/39 (38.46%), Postives = 24/39 (61.54%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHI 713
            +GADL+VME D+   R   PF F  +K   G++ +++ I
Sbjct:  155 VGADLSVMESDSKVFRKDRPFAFTNLKTDEGLDVVMDWI 193          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG3_STRGG (Urease accessory protein ureG 3 OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=ureG3 PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 9.486e-40
Identity = 85/169 (50.30%), Postives = 108/169 (63.91%), Query Frame = 1
Query:   91 HSHEPIYSPGYFSRRAPPILSRNFNERAFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLF-KADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            H H+P+  P                 RA  +G+ GPVGTGK++++  LC+ L  + S+A VTNDI+T ED  FL   G LP ERIRAVETG CPH AIR+D+S NL  +E+L   +   DL+L ESGGDNL A FS  LAD  ++ I+V+GG  + RKGGPGIT ADLL
Sbjct:   20 HYHQPLNQP-----------------RALRIGVAGPVGTGKSSILATLCRELAGELSMAVVTNDIYTDEDARFLRSAGVLPTERIRAVETGACPHTAIRDDVSANLDAVEDLEEAYGPLDLVLIESGGDNLTATFSPALADAQLFSIDVAGGGDVARKGGPGITGADLL 171          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_STAAB (Urease accessory protein ureG OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=ureG PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.186e-39
Identity = 76/137 (55.47%), Postives = 98/137 (71.53%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLF-KADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQAD 588
            +GIGGPVG GKT L+  + K L  + S+  +TNDI+TKED + L+ +G LPE RI  VETGGCPH AIRED S+N   ++EL       +L+  ESGGDNLAA FS EL D+ IYII+V+ G+KIPRKGG G+ ++D
Sbjct:    7 IGIGGPVGAGKTQLIEKVVKRLSKEMSIGVITNDIYTKEDEKILVNSGVLPESRIIGVETGGCPHTAIREDASMNFAAIDELLERHDDIELIFIESGGDNLAATFSPELVDFSIYIIDVAQGEKIPRKGGQGMIKSD 143          

HSP 2 Score: 30.4166 bits (67), Expect = 1.186e-39
Identity = 14/39 (35.90%), Postives = 21/39 (53.85%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHI 713
            +GA L  M  D    RD  PF F  +K   G++E+++ I
Sbjct:  156 VGASLEQMAEDTKVFRDKRPFTFTNLKTDEGLDEVIDWI 194          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_KOCRD (Urease accessory protein ureG OS=Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) GN=ureG PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.546e-39
Identity = 73/138 (52.90%), Postives = 98/138 (71.01%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLF-KADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADL 591
            +G+GGPVG GKT L+  L + +  + S+AA+TNDI+T ED + L R   LPEERI  +ETGGCPH AIRED S+N   +E+L   F    ++  ESGGDNL+A FS EL D+ IY+I+V+ G+KIPRK G G+ ++DL
Sbjct:    6 IGVGGPVGAGKTQLVERLTRAMSHEISMAAITNDIYTIEDAKILARTSVLPEERIIGLETGGCPHTAIREDTSMNEAAIEQLKKRFPDLQVIFVESGGDNLSATFSPELVDFSIYVIDVAQGEKIPRKAGQGMIKSDL 143          

HSP 2 Score: 32.7278 bits (73), Expect = 1.546e-39
Identity = 15/35 (42.86%), Postives = 20/35 (57.14%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEI 701
            +GADL VME D+   R   PF F  +K   G+E +
Sbjct:  155 VGADLGVMEEDSRVFRKDKPFAFTNLKTDEGLERV 189          
The following BLAST results are available for this feature:
BLAST of CK936512 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 253
Match NameE-valueIdentityDescription
UREG1_SACEN5.063e-4458.74Urease accessory protein ureG 1 OS=Saccharopolyspo... [more]
UREG_FRASC7.150e-4358.04Urease accessory protein ureG OS=Frankia sp. (stra... [more]
UREG_JANSC7.172e-4359.71Urease accessory protein ureG OS=Jannaschia sp. (s... [more]
UREG_FRAAA1.217e-4258.04Urease accessory protein ureG OS=Frankia alni (str... [more]
UREG_BACSB1.218e-4255.07Urease accessory protein ureG OS=Bacillus sp. (str... [more]
UREG_PROM21.121e-4059.71Urease accessory protein ureG OS=Prochlorococcus m... [more]
UREG_MICLC5.363e-4054.35Urease accessory protein ureG OS=Micrococcus luteu... [more]
UREG3_STRGG9.486e-4050.30Urease accessory protein ureG 3 OS=Streptomyces gr... [more]
UREG_STAAB1.186e-3955.47Urease accessory protein ureG OS=Staphylococcus au... [more]
UREG_KOCRD1.546e-3952.90Urease accessory protein ureG OS=Kocuria rhizophil... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004521_E09 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0001_IVF_E09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936512 ID=CK936512; Name=CK936512; organism=Citrus sinensis; type=EST; length=740bp
ACCCATGAAAAAAATCATGGTGATTCAACAGCAACATCATGGGTGGGGTC
AGATGGGAGGGTGTATCATAGCCATGATGGACTGGCGCCACACTCGCACG
AACCCATTTACTCTCCAGGCTATTTCAGCAGAAGAGCTCCGCCTATTCTC
AGCAGAAATTTCAATGAGAGAGCTTTTACCGTTGGCATTGGTGGCCCTGT
TGGTACTGGGAAAACAGCTTTAATGCTGGCTTTGTGTAAATTCTTGCGGG
ACAAGTACAGTCTTGCAGCTGTCACAAATGATATTTTCACAAAAGAAGAT
GGTGAATTCCTGATGCGGAATGGTGCTCTGCCTGAGGAGAGAATACGTGC
TGTGGAAACAGGTGGATGTCCTCATGCTGCAATTCGTGAAGACATCAGCA
TCAATCTGGGCCCTCTCGAGGAACTTTCTAACTTGTTCAAAGCAGACCTA
CTTCTTTGCGAATCTGGGGGAGATAATTTAGCTGCCAACTTCAGCAGGGA
ACTTGCAGACTATATCATTTATATAATAAACGTTTCTGGTGGTGATAAAA
TTCCTCGGAAAGGTGGCCCAGGCATCACCCAAGCTGACCTTCTGCAATAG
GAGCTGACTTAGCAGTAATGGAGCGTGATGCACTCCGGATGCGTGATGGA
GGGCCTTTTATCTTCGCTCAGGTCAAGCATGGGCTTGGTGTGGAGGAAAT
AGTGAATCACATTTTACAGGCTTGGGAAGCANNNNCAGGG
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