CK936512

Overview
NameCK936512
Unique NameCK936512
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length740
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_METFK (Urease accessory protein ureG OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=ureG PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.859e-53
Identity = 92/139 (66.19%), Postives = 111/139 (79.86%), Query Frame = 1 
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFK-ADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            VGIGGPVG+GKTAL LALC+ LR+ Y++A VTNDI+T+ED EFL RN AL  ERI  VETGGCPH AIRED S+NL  + +LS  F   D++  ESGGDNLAA FS EL+D  IY+I+V+ G+KIPRKGGPGIT++DLL
Sbjct:    9 VGIGGPVGSGKTALTLALCQRLRNVYNIAVVTNDIYTREDAEFLTRNEALAPERIIGVETGGCPHTAIREDASMNLEAVAQLSERFNPLDIVFVESGGDNLAATFSPELSDLTIYVIDVAAGEKIPRKGGPGITKSDLL 147

HSP 2 Score: 46.2098 bits (108), Expect = 1.859e-53
Identity = 22/39 (56.41%), Postives = 27/39 (69.23%), Query Frame = 3 
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHI 713
            +GA L VME+DA RMR   PFIF  +K G G+E+IV  I
Sbjct:  158 VGASLEVMEKDARRMRGERPFIFTNLKRGQGLEDIVGFI 196
[Close]
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_SINMW (Urease accessory protein ureG OS=Sinorhizobium medicae (strain WSM419) GN=ureG PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.859e-53
Identity = 92/139 (66.19%), Postives = 110/139 (79.14%), Query Frame = 1 
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELS-NLFKADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            VGIGGPVG+GKTAL   LCK +R++YSLA VTNDI+TKED E L+R  ALP ERI  VETGGCPH AIRED SINL  + +L+  L + DL+  ESGGDNLAA FS +LAD  IY+I+V  G++IPRKGGPGIT++DLL
Sbjct:   10 VGIGGPVGSGKTALTEKLCKAMRERYSLAVVTNDIYTKEDAEALVRMQALPSERIVGVETGGCPHTAIREDASINLQAIADLNRRLPELDLVFIESGGDNLAATFSPDLADLTIYVISVCQGEEIPRKGGPGITKSDLL 148

HSP 2 Score: 49.6766 bits (117), Expect = 1.859e-53
Identity = 22/40 (55.00%), Postives = 30/40 (75.00%), Query Frame = 3 
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHIL 716
            +GADL +MERDA RMR   PF+F+ +K G GVE IV+ ++
Sbjct:  159 VGADLEIMERDAARMRGEKPFVFSDMKRGDGVERIVDFLI 198
[Close]
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_PSEU2 (Urease accessory protein ureG OS=Pseudomonas syringae pv. syringae (strain B728a) GN=ureG PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 3.160e-53
Identity = 94/145 (64.83%), Postives = 116/145 (80.00%), Query Frame = 1 
Query:  163 NERAFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFKA-DLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            N +   VGIGGPVG+GKTAL LALC  LRD+Y+LA VTNDI+T+ED +FL+RN AL  ERI  VETGGCPH AIRED SINL  +++L+  F+  DL++ ESGGDNL+A FS EL+D  IY+I+VS GDK+PRKGGPGI ++DLL
Sbjct:    2 NSQPLRVGIGGPVGSGKTALTLALCLALRDRYNLAVVTNDIYTREDADFLVRNEALAPERIIGVETGGCPHTAIREDASINLEAVDQLNRRFEGLDLIIVESGGDNLSATFSPELSDLTIYVIDVSAGDKLPRKGGPGICKSDLL 146

HSP 2 Score: 38.1206 bits (87), Expect = 3.160e-53
Identity = 17/39 (43.59%), Postives = 25/39 (64.10%), Query Frame = 3 
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHI 713
            +GA L +M+ D  RMR   PF+F+  K G G+E+I+  I
Sbjct:  157 VGASLEMMDSDTRRMRGEKPFVFSNQKTGQGLEQIIAFI 195
[Close]
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_PSE14 (Urease accessory protein ureG OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=ureG PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 3.160e-53
Identity = 94/145 (64.83%), Postives = 116/145 (80.00%), Query Frame = 1 
Query:  163 NERAFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFKA-DLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            N +   VGIGGPVG+GKTAL LALC  LRD+Y+LA VTNDI+T+ED +FL+RN AL  ERI  VETGGCPH AIRED SINL  +++L+  F+  DL++ ESGGDNL+A FS EL+D  IY+I+VS GDK+PRKGGPGI ++DLL
Sbjct:    2 NSQPLRVGIGGPVGSGKTALTLALCLALRDRYNLAVVTNDIYTREDADFLVRNEALAPERIIGVETGGCPHTAIREDASINLEAVDQLNRRFEGLDLIIVESGGDNLSATFSPELSDLTIYVIDVSAGDKLPRKGGPGICKSDLL 146

HSP 2 Score: 38.1206 bits (87), Expect = 3.160e-53
Identity = 17/39 (43.59%), Postives = 25/39 (64.10%), Query Frame = 3 
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHI 713
            +GA L +M+ D  RMR   PF+F+  K G G+E+I+  I
Sbjct:  157 VGASLEMMDSDTRRMRGEKPFVFSNQKTGQGLEQIIAFI 195
[Close]
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_RALEJ (Urease accessory protein ureG OS=Ralstonia eutropha (strain JMP134) GN=ureG PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 5.367e-53
Identity = 90/139 (64.75%), Postives = 109/139 (78.42%), Query Frame = 1 
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLF-KADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            VG+GGPVG+GKT L+  LCK +RD+Y L A+TNDI+TKED   L  +GALP ERI  VETGGCPH AIRED SINL  +E +   F  AD++  ESGGDNLAA FS EL+D  IY+I+V+GG+KIPRKGGPGIT++DLL
Sbjct:   14 VGVGGPVGSGKTTLLEMLCKAMRDRYDLVAITNDIYTKEDQRLLTISGALPAERIMGVETGGCPHTAIREDASINLEAVERMLAKFPDADVVFIESGGDNLAATFSPELSDLTIYVIDVAGGEKIPRKGGPGITKSDLL 152

HSP 2 Score: 45.0542 bits (105), Expect = 5.367e-53
Identity = 20/41 (48.78%), Postives = 27/41 (65.85%), Query Frame = 3 
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHILQ 719
            +GA L VME DA +MR G PF+   VK G G++E++  I Q
Sbjct:  163 VGASLEVMESDARKMRGGRPFVMGSVKSGQGLDEVIRFIEQ 203
[Close]
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_ACIBY (Urease accessory protein ureG OS=Acinetobacter baumannii (strain AYE) GN=ureG PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 6.999e-53
Identity = 91/139 (65.47%), Postives = 112/139 (80.58%), Query Frame = 1 
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFKA-DLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            VGIGGPVG+GKTAL L LC+ LRDKY++A VTNDI+TKED  FL RN A+  +RI  VETGGCPH AIRED SINL  +++L   F   +L++ ESGGDNLAA FS EL+D  +Y+I+V+GG+KIPRKGGPGIT++DLL
Sbjct:    9 VGIGGPVGSGKTALTLNLCRALRDKYNMAVVTNDIYTKEDSNFLTRNEAMSPDRIVGVETGGCPHTAIREDASINLAAIDDLCEKFDGLELIIIESGGDNLAATFSPELSDLTLYVIDVAGGEKIPRKGGPGITKSDLL 147

HSP 2 Score: 40.4318 bits (93), Expect = 6.999e-53
Identity = 19/39 (48.72%), Postives = 28/39 (71.79%), Query Frame = 3 
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHI 713
            +GA+L VM++DA RMR   PF+F+ +K   G+EEI+  I
Sbjct:  158 VGANLDVMDQDAKRMRGEKPFLFSNMKTQDGLEEIIQFI 196
[Close]
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_ACIBT (Urease accessory protein ureG OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=ureG PE=3 SV=2)

HSP 1 Score: 186.808 bits (473), Expect = 6.999e-53
Identity = 91/139 (65.47%), Postives = 112/139 (80.58%), Query Frame = 1 
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFKA-DLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            VGIGGPVG+GKTAL L LC+ LRDKY++A VTNDI+TKED  FL RN A+  +RI  VETGGCPH AIRED SINL  +++L   F   +L++ ESGGDNLAA FS EL+D  +Y+I+V+GG+KIPRKGGPGIT++DLL
Sbjct:    9 VGIGGPVGSGKTALTLNLCRALRDKYNMAVVTNDIYTKEDSNFLTRNEAMSPDRIVGVETGGCPHTAIREDASINLAAIDDLCEKFDGLELIIIESGGDNLAATFSPELSDLTLYVIDVAGGEKIPRKGGPGITKSDLL 147

HSP 2 Score: 40.4318 bits (93), Expect = 6.999e-53
Identity = 19/39 (48.72%), Postives = 28/39 (71.79%), Query Frame = 3 
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHI 713
            +GA+L VM++DA RMR   PF+F+ +K   G+EEI+  I
Sbjct:  158 VGANLDVMDQDAKRMRGEKPFLFSNMKTQDGLEEIIQFI 196
[Close]
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_ACIBS (Urease accessory protein ureG OS=Acinetobacter baumannii (strain SDF) GN=ureG PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 6.999e-53
Identity = 91/139 (65.47%), Postives = 112/139 (80.58%), Query Frame = 1 
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFKA-DLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            VGIGGPVG+GKTAL L LC+ LRDKY++A VTNDI+TKED  FL RN A+  +RI  VETGGCPH AIRED SINL  +++L   F   +L++ ESGGDNLAA FS EL+D  +Y+I+V+GG+KIPRKGGPGIT++DLL
Sbjct:    9 VGIGGPVGSGKTALTLNLCRALRDKYNMAVVTNDIYTKEDSNFLTRNEAMSPDRIVGVETGGCPHTAIREDASINLAAIDDLCEKFDGLELIIIESGGDNLAATFSPELSDLTLYVIDVAGGEKIPRKGGPGITKSDLL 147

HSP 2 Score: 40.4318 bits (93), Expect = 6.999e-53
Identity = 19/39 (48.72%), Postives = 28/39 (71.79%), Query Frame = 3 
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHI 713
            +GA+L VM++DA RMR   PF+F+ +K   G+EEI+  I
Sbjct:  158 VGANLDVMDQDAKRMRGEKPFLFSNMKTQDGLEEIIQFI 196
[Close]
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_ACIBC (Urease accessory protein ureG OS=Acinetobacter baumannii (strain ACICU) GN=ureG PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 6.999e-53
Identity = 91/139 (65.47%), Postives = 112/139 (80.58%), Query Frame = 1 
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFKA-DLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            VGIGGPVG+GKTAL L LC+ LRDKY++A VTNDI+TKED  FL RN A+  +RI  VETGGCPH AIRED SINL  +++L   F   +L++ ESGGDNLAA FS EL+D  +Y+I+V+GG+KIPRKGGPGIT++DLL
Sbjct:    9 VGIGGPVGSGKTALTLNLCRALRDKYNMAVVTNDIYTKEDSNFLTRNEAMSPDRIVGVETGGCPHTAIREDASINLAAIDDLCEKFDGLELIIIESGGDNLAATFSPELSDLTLYVIDVAGGEKIPRKGGPGITKSDLL 147

HSP 2 Score: 40.4318 bits (93), Expect = 6.999e-53
Identity = 19/39 (48.72%), Postives = 28/39 (71.79%), Query Frame = 3 
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHI 713
            +GA+L VM++DA RMR   PF+F+ +K   G+EEI+  I
Sbjct:  158 VGANLDVMDQDAKRMRGEKPFLFSNMKTQDGLEEIIQFI 196
[Close]
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_ACIB5 (Urease accessory protein ureG OS=Acinetobacter baumannii (strain AB0057) GN=ureG PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 6.999e-53
Identity = 91/139 (65.47%), Postives = 112/139 (80.58%), Query Frame = 1 
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFKA-DLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            VGIGGPVG+GKTAL L LC+ LRDKY++A VTNDI+TKED  FL RN A+  +RI  VETGGCPH AIRED SINL  +++L   F   +L++ ESGGDNLAA FS EL+D  +Y+I+V+GG+KIPRKGGPGIT++DLL
Sbjct:    9 VGIGGPVGSGKTALTLNLCRALRDKYNMAVVTNDIYTKEDSNFLTRNEAMSPDRIVGVETGGCPHTAIREDASINLAAIDDLCEKFDGLELIIIESGGDNLAATFSPELSDLTLYVIDVAGGEKIPRKGGPGITKSDLL 147

HSP 2 Score: 40.4318 bits (93), Expect = 6.999e-53
Identity = 19/39 (48.72%), Postives = 28/39 (71.79%), Query Frame = 3 
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHI 713
            +GA+L VM++DA RMR   PF+F+ +K   G+EEI+  I
Sbjct:  158 VGANLDVMDQDAKRMRGEKPFLFSNMKTQDGLEEIIQFI 196
The following BLAST results are available for this feature:
BLAST of CK936512 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 253
Match NameE-valueIdentityDescription
UREG_METFK1.859e-5366.19Urease accessory protein ureG OS=Methylobacillus f... [more]
UREG_SINMW1.859e-5366.19Urease accessory protein ureG OS=Sinorhizobium med... [more]
UREG_PSEU23.160e-5364.83Urease accessory protein ureG OS=Pseudomonas syrin... [more]
UREG_PSE143.160e-5364.83Urease accessory protein ureG OS=Pseudomonas syrin... [more]
UREG_RALEJ5.367e-5364.75Urease accessory protein ureG OS=Ralstonia eutroph... [more]
UREG_ACIBY6.999e-5365.47Urease accessory protein ureG OS=Acinetobacter bau... [more]
UREG_ACIBT6.999e-5365.47Urease accessory protein ureG OS=Acinetobacter bau... [more]
UREG_ACIBS6.999e-5365.47Urease accessory protein ureG OS=Acinetobacter bau... [more]
UREG_ACIBC6.999e-5365.47Urease accessory protein ureG OS=Acinetobacter bau... [more]
UREG_ACIB56.999e-5365.47Urease accessory protein ureG OS=Acinetobacter bau... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004521_E09 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0001_IVF_E09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936512 ID=CK936512; Name=CK936512; organism=Citrus sinensis; type=EST; length=740bp
ACCCATGAAAAAAATCATGGTGATTCAACAGCAACATCATGGGTGGGGTC
AGATGGGAGGGTGTATCATAGCCATGATGGACTGGCGCCACACTCGCACG
AACCCATTTACTCTCCAGGCTATTTCAGCAGAAGAGCTCCGCCTATTCTC
AGCAGAAATTTCAATGAGAGAGCTTTTACCGTTGGCATTGGTGGCCCTGT
TGGTACTGGGAAAACAGCTTTAATGCTGGCTTTGTGTAAATTCTTGCGGG
ACAAGTACAGTCTTGCAGCTGTCACAAATGATATTTTCACAAAAGAAGAT
GGTGAATTCCTGATGCGGAATGGTGCTCTGCCTGAGGAGAGAATACGTGC
TGTGGAAACAGGTGGATGTCCTCATGCTGCAATTCGTGAAGACATCAGCA
TCAATCTGGGCCCTCTCGAGGAACTTTCTAACTTGTTCAAAGCAGACCTA
CTTCTTTGCGAATCTGGGGGAGATAATTTAGCTGCCAACTTCAGCAGGGA
ACTTGCAGACTATATCATTTATATAATAAACGTTTCTGGTGGTGATAAAA
TTCCTCGGAAAGGTGGCCCAGGCATCACCCAAGCTGACCTTCTGCAATAG
GAGCTGACTTAGCAGTAATGGAGCGTGATGCACTCCGGATGCGTGATGGA
GGGCCTTTTATCTTCGCTCAGGTCAAGCATGGGCTTGGTGTGGAGGAAAT
AGTGAATCACATTTTACAGGCTTGGGAAGCANNNNCAGGG
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