CK936512

Overview
NameCK936512
Unique NameCK936512
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length740
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_STAEQ (Urease accessory protein ureG OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=ureG PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 2.624e-39
Identity = 77/137 (56.20%), Postives = 98/137 (71.53%), Query Frame = 1 
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEE-LSNLFKADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQAD 588
            +GIGGPVG GKT L+  + K L  K S+  +TNDI+TKED + L+  G LPE+RI  VETGGCPH AIRED S+N   ++E L      +L+  ESGGDNLAA FS EL D+ IYII+V+ G+KIPRKGG G+ ++D
Sbjct:    7 IGIGGPVGAGKTQLIEKVVKRLAKKMSIGVITNDIYTKEDEKILVNTGVLPEDRIIGVETGGCPHTAIREDASMNFAAIDELLERNDDIELIFIESGGDNLAATFSPELVDFSIYIIDVAQGEKIPRKGGQGMIKSD 143

HSP 2 Score: 27.7202 bits (60), Expect = 2.624e-39
Identity = 13/39 (33.33%), Postives = 20/39 (51.28%), Query Frame = 3 
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHI 713
            +GA L  M +D    R   PF F  +K   G+E+++  I
Sbjct:  156 VGASLDQMAKDTEVFRGNHPFAFTNLKTDEGLEKVIEWI 194
[Close]
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_LARHH (Urease accessory protein ureG OS=Laribacter hongkongensis (strain HLHK9) GN=ureG PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 3.417e-39
Identity = 72/142 (50.70%), Postives = 98/142 (69.01%), Query Frame = 1 
Query:  181 VGIGGPVGTGKTALMLALCKFLRDK-YSLAAVTNDIFTKEDGEFLMRN--GALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFK-ADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            +GIGGPVG+GKTA++ A+   + D    +  +TND+ T ED   + R   G L EE+I  VETG CPH A+RED S+NL  +E++ + F   D++L ESGGDNL   FS  L D+ IY+I+V+ GDKIPRK GPGI+Q+D+L
Sbjct:    7 IGIGGPVGSGKTAIIEAITPLMLDLGIKVLIITNDVVTTEDARHVQRTLKGVLVEEKIIGVETGACPHTAVREDPSMNLAAVEDMESRFPDTDVVLIESGGDNLTLTFSPALVDFFIYVIDVAAGDKIPRKNGPGISQSDIL 148

HSP 2 Score: 38.891 bits (89), Expect = 3.417e-39
Identity = 19/39 (48.72%), Postives = 25/39 (64.10%), Query Frame = 3 
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHI 713
            +GA L VM+RD+  MR   PFIF   K G G+ E+V+ I
Sbjct:  159 VGASLEVMDRDSKFMRGDKPFIFTNCKTGEGIPELVHLI 197
[Close]
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG2_BRUO2 (Urease accessory protein ureG 2 OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=ureG2 PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 4.450e-39
Identity = 76/142 (53.52%), Postives = 100/142 (70.42%), Query Frame = 1 
Query:  181 VGIGGPVGTGKTALMLALCKFL-RDKYSLAAVTNDIFTKEDGEFLMRN--GALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFK-ADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            +G+GGPVG+GKTA++ A+   L +  Y +  +TNDI T ED + + R   G L E+RI  VETGGCPH A+RED S+NL  +EE+   F   DL+L ESGGDNL   FS  L D+ IY+I+V+ GDKIPRK GPGI+Q+D+L
Sbjct:    7 IGVGGPVGSGKTAIIEAVVPILIKLGYRILVITNDIVTTEDAKHVQRTLKGVLIEDRIVGVETGGCPHTAVREDPSMNLAAVEEMEAKFPDTDLVLLESGGDNLTLTFSPALIDFFIYVIDVAAGDKIPRKNGPGISQSDIL 148

HSP 2 Score: 33.8834 bits (76), Expect = 4.450e-39
Identity = 15/39 (38.46%), Postives = 24/39 (61.54%), Query Frame = 3 
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHI 713
            +GA L VM+ D+  MR   PF+F   K   G++++V+ I
Sbjct:  159 VGASLQVMDDDSRMMRGKKPFVFTNCKTNEGIDDLVHLI 197
[Close]
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG2_BRUME (Urease accessory protein ureG 2 OS=Brucella melitensis GN=ureG2 PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 4.450e-39
Identity = 76/142 (53.52%), Postives = 100/142 (70.42%), Query Frame = 1 
Query:  181 VGIGGPVGTGKTALMLALCKFL-RDKYSLAAVTNDIFTKEDGEFLMRN--GALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFK-ADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            +G+GGPVG+GKTA++ A+   L +  Y +  +TNDI T ED + + R   G L E+RI  VETGGCPH A+RED S+NL  +EE+   F   DL+L ESGGDNL   FS  L D+ IY+I+V+ GDKIPRK GPGI+Q+D+L
Sbjct:    7 IGVGGPVGSGKTAIIEAVVPILIKLGYRILVITNDIVTTEDAKHVQRTLKGVLIEDRIVGVETGGCPHTAVREDPSMNLAAVEEMEAKFPDTDLVLLESGGDNLTLTFSPALIDFFIYVIDVAAGDKIPRKNGPGISQSDIL 148

HSP 2 Score: 33.8834 bits (76), Expect = 4.450e-39
Identity = 15/39 (38.46%), Postives = 24/39 (61.54%), Query Frame = 3 
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHI 713
            +GA L VM+ D+  MR   PF+F   K   G++++V+ I
Sbjct:  159 VGASLQVMDDDSRMMRGKKPFVFTNCKTNEGIDDLVHLI 197
[Close]
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG2_BRUC2 (Urease accessory protein ureG 2 OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=ureG2 PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 4.450e-39
Identity = 76/142 (53.52%), Postives = 100/142 (70.42%), Query Frame = 1 
Query:  181 VGIGGPVGTGKTALMLALCKFL-RDKYSLAAVTNDIFTKEDGEFLMRN--GALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFK-ADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            +G+GGPVG+GKTA++ A+   L +  Y +  +TNDI T ED + + R   G L E+RI  VETGGCPH A+RED S+NL  +EE+   F   DL+L ESGGDNL   FS  L D+ IY+I+V+ GDKIPRK GPGI+Q+D+L
Sbjct:    7 IGVGGPVGSGKTAIIEAVVPILIKLGYRILVITNDIVTTEDAKHVQRTLKGVLIEDRIVGVETGGCPHTAVREDPSMNLAAVEEMEAKFPDTDLVLLESGGDNLTLTFSPALIDFFIYVIDVAAGDKIPRKNGPGISQSDIL 148

HSP 2 Score: 33.8834 bits (76), Expect = 4.450e-39
Identity = 15/39 (38.46%), Postives = 24/39 (61.54%), Query Frame = 3 
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHI 713
            +GA L VM+ D+  MR   PF+F   K   G++++V+ I
Sbjct:  159 VGASLQVMDDDSRMMRGKKPFVFTNCKTNEGIDDLVHLI 197
[Close]
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG2_BRUAB (Urease accessory protein ureG 2 OS=Brucella abortus GN=ureG2 PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 4.450e-39
Identity = 76/142 (53.52%), Postives = 100/142 (70.42%), Query Frame = 1 
Query:  181 VGIGGPVGTGKTALMLALCKFL-RDKYSLAAVTNDIFTKEDGEFLMRN--GALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFK-ADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            +G+GGPVG+GKTA++ A+   L +  Y +  +TNDI T ED + + R   G L E+RI  VETGGCPH A+RED S+NL  +EE+   F   DL+L ESGGDNL   FS  L D+ IY+I+V+ GDKIPRK GPGI+Q+D+L
Sbjct:    7 IGVGGPVGSGKTAIIEAVVPILIKLGYRILVITNDIVTTEDAKHVQRTLKGVLIEDRIVGVETGGCPHTAVREDPSMNLAAVEEMEAKFPDTDLVLLESGGDNLTLTFSPALIDFFIYVIDVAAGDKIPRKNGPGISQSDIL 148

HSP 2 Score: 33.8834 bits (76), Expect = 4.450e-39
Identity = 15/39 (38.46%), Postives = 24/39 (61.54%), Query Frame = 3 
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHI 713
            +GA L VM+ D+  MR   PF+F   K   G++++V+ I
Sbjct:  159 VGASLQVMDDDSRMMRGKKPFVFTNCKTNEGIDDLVHLI 197
[Close]
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG2_BRUA2 (Urease accessory protein ureG 2 OS=Brucella abortus (strain 2308) GN=ureG2 PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 4.450e-39
Identity = 76/142 (53.52%), Postives = 100/142 (70.42%), Query Frame = 1 
Query:  181 VGIGGPVGTGKTALMLALCKFL-RDKYSLAAVTNDIFTKEDGEFLMRN--GALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFK-ADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            +G+GGPVG+GKTA++ A+   L +  Y +  +TNDI T ED + + R   G L E+RI  VETGGCPH A+RED S+NL  +EE+   F   DL+L ESGGDNL   FS  L D+ IY+I+V+ GDKIPRK GPGI+Q+D+L
Sbjct:    7 IGVGGPVGSGKTAIIEAVVPILIKLGYRILVITNDIVTTEDAKHVQRTLKGVLIEDRIVGVETGGCPHTAVREDPSMNLAAVEEMEAKFPDTDLVLLESGGDNLTLTFSPALIDFFIYVIDVAAGDKIPRKNGPGISQSDIL 148

HSP 2 Score: 33.8834 bits (76), Expect = 4.450e-39
Identity = 15/39 (38.46%), Postives = 24/39 (61.54%), Query Frame = 3 
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHI 713
            +GA L VM+ D+  MR   PF+F   K   G++++V+ I
Sbjct:  159 VGASLQVMDDDSRMMRGKKPFVFTNCKTNEGIDDLVHLI 197
[Close]
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_CORGL (Urease accessory protein ureG OS=Corynebacterium glutamicum GN=ureG PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.803e-39
Identity = 76/138 (55.07%), Postives = 101/138 (73.19%), Query Frame = 1 
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLF-KADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADL 591
            +G+GGPVG GKT L+  + + L D+ S+AA+TNDI+T ED + L  NG LPEERI  +ETGGCPH AIRED S+N   +++L   F   +L+  ESGGDNL+A FS EL D+ IYII+V+ G+KIPRK G G+ ++DL
Sbjct:    6 IGVGGPVGAGKTQLVERITRALIDEVSMAAITNDIYTIEDAKILAANGVLPEERIVGIETGGCPHTAIREDTSMNDAAIKDLVERFPDLELIFVESGGDNLSATFSPELVDFSIYIIDVAQGEKIPRKAGQGMIKSDL 143

HSP 2 Score: 26.1794 bits (56), Expect = 5.803e-39
Identity = 12/39 (30.77%), Postives = 21/39 (53.85%), Query Frame = 3 
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHI 713
            +GA+L VM  DA   R   PF    ++   G+++++  I
Sbjct:  155 VGANLDVMVEDAKAFRKNKPFCLTNLRTDDGLDKVLEWI 193
[Close]
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_CORGB (Urease accessory protein ureG OS=Corynebacterium glutamicum (strain R) GN=ureG PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.803e-39
Identity = 76/138 (55.07%), Postives = 101/138 (73.19%), Query Frame = 1 
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLF-KADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADL 591
            +G+GGPVG GKT L+  + + L D+ S+AA+TNDI+T ED + L  NG LPEERI  +ETGGCPH AIRED S+N   +++L   F   +L+  ESGGDNL+A FS EL D+ IYII+V+ G+KIPRK G G+ ++DL
Sbjct:    6 IGVGGPVGAGKTQLVERITRALIDEVSMAAITNDIYTIEDAKILAANGVLPEERIVGIETGGCPHTAIREDTSMNDAAIKDLVERFPDLELIFVESGGDNLSATFSPELVDFSIYIIDVAQGEKIPRKAGQGMIKSDL 143

HSP 2 Score: 26.1794 bits (56), Expect = 5.803e-39
Identity = 12/39 (30.77%), Postives = 21/39 (53.85%), Query Frame = 3 
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHI 713
            +GA+L VM  DA   R   PF    ++   G+++++  I
Sbjct:  155 VGANLDVMVEDAKTFRKNKPFCLTNLRTDDGLDKVLEWI 193
[Close]
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_STAS1 (Urease accessory protein ureG OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=ureG PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 5.803e-39
Identity = 75/137 (54.74%), Postives = 98/137 (71.53%), Query Frame = 1 
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNL-FKADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQAD 588
            +G+GGPVG GKT L+  + K L    S+  +TNDI+TKED + L+ +G LPE+RI  VETGGCPH AIRED S+N   ++EL       +L+  ESGGDNLAA FS EL D+ IYII+V+ G+KIPRKGG G+ ++D
Sbjct:    7 IGVGGPVGAGKTQLIEKIVKRLAKDMSIGVITNDIYTKEDEKILVNSGVLPEDRIIGVETGGCPHTAIREDASMNFAAIDELKERNDDIELIFIESGGDNLAATFSPELVDFSIYIIDVAQGEKIPRKGGQGMIKSD 143

HSP 2 Score: 28.1054 bits (61), Expect = 5.803e-39
Identity = 14/41 (34.15%), Postives = 20/41 (48.78%), Query Frame = 3 
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHILQ 719
            +GA L  M  D    R   PF F  +K   G++E++  I Q
Sbjct:  156 VGASLDRMAEDTKVFRGNRPFTFTNLKTDEGLDEVIQWIEQ 196
The following BLAST results are available for this feature:
BLAST of CK936512 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 253
Match NameE-valueIdentityDescription
UREG_STAEQ2.624e-3956.20Urease accessory protein ureG OS=Staphylococcus ep... [more]
UREG_LARHH3.417e-3950.70Urease accessory protein ureG OS=Laribacter hongko... [more]
UREG2_BRUO24.450e-3953.52Urease accessory protein ureG 2 OS=Brucella ovis (... [more]
UREG2_BRUME4.450e-3953.52Urease accessory protein ureG 2 OS=Brucella melite... [more]
UREG2_BRUC24.450e-3953.52Urease accessory protein ureG 2 OS=Brucella canis ... [more]
UREG2_BRUAB4.450e-3953.52Urease accessory protein ureG 2 OS=Brucella abortu... [more]
UREG2_BRUA24.450e-3953.52Urease accessory protein ureG 2 OS=Brucella abortu... [more]
UREG_CORGL5.803e-3955.07Urease accessory protein ureG OS=Corynebacterium g... [more]
UREG_CORGB5.803e-3955.07Urease accessory protein ureG OS=Corynebacterium g... [more]
UREG_STAS15.803e-3954.74Urease accessory protein ureG OS=Staphylococcus sa... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004521_E09 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0001_IVF_E09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936512 ID=CK936512; Name=CK936512; organism=Citrus sinensis; type=EST; length=740bp
ACCCATGAAAAAAATCATGGTGATTCAACAGCAACATCATGGGTGGGGTC
AGATGGGAGGGTGTATCATAGCCATGATGGACTGGCGCCACACTCGCACG
AACCCATTTACTCTCCAGGCTATTTCAGCAGAAGAGCTCCGCCTATTCTC
AGCAGAAATTTCAATGAGAGAGCTTTTACCGTTGGCATTGGTGGCCCTGT
TGGTACTGGGAAAACAGCTTTAATGCTGGCTTTGTGTAAATTCTTGCGGG
ACAAGTACAGTCTTGCAGCTGTCACAAATGATATTTTCACAAAAGAAGAT
GGTGAATTCCTGATGCGGAATGGTGCTCTGCCTGAGGAGAGAATACGTGC
TGTGGAAACAGGTGGATGTCCTCATGCTGCAATTCGTGAAGACATCAGCA
TCAATCTGGGCCCTCTCGAGGAACTTTCTAACTTGTTCAAAGCAGACCTA
CTTCTTTGCGAATCTGGGGGAGATAATTTAGCTGCCAACTTCAGCAGGGA
ACTTGCAGACTATATCATTTATATAATAAACGTTTCTGGTGGTGATAAAA
TTCCTCGGAAAGGTGGCCCAGGCATCACCCAAGCTGACCTTCTGCAATAG
GAGCTGACTTAGCAGTAATGGAGCGTGATGCACTCCGGATGCGTGATGGA
GGGCCTTTTATCTTCGCTCAGGTCAAGCATGGGCTTGGTGTGGAGGAAAT
AGTGAATCACATTTTACAGGCTTGGGAAGCANNNNCAGGG
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