CK936512

Overview
NameCK936512
Unique NameCK936512
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length740
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_YERE8 (Urease accessory protein ureG OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=ureG PE=3 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 3.990e-37
Identity = 72/142 (50.70%), Postives = 97/142 (68.31%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDK-YSLAAVTNDIFTKEDGEFLMRN--GALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFK-ADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            +GIGGPVG+GKTA++  +   L  +      +TNDI T ED + + R   G L EE+I  VETG CPH A+RED S+N+  +EE+   F  +DL++ ESGGDNL   FS  LAD+ IY+I+V+ G+KIPRK GPG+ QAD+L
Sbjct:   15 IGIGGPVGSGKTAIIEVITPILIKRGIKPLIITNDIVTTEDAKQVKRTLKGILDEEKILGVETGACPHTAVREDPSMNIAAVEEMEERFPDSDLIMIESGGDNLTLTFSPALADFYIYVIDVAEGEKIPRKNGPGLVQADIL 156          

HSP 2 Score: 35.8094 bits (81), Expect = 3.990e-37
Identity = 17/41 (41.46%), Postives = 25/41 (60.98%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHILQ 719
            +GA L VME D   +R   P+I    K G G+EE+V+ I++
Sbjct:  167 VGASLDVMESDTKVVRGERPYILTNCKTGQGIEELVDMIMR 207          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG2_METPB (Urease accessory protein ureG 2 OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=ureG2 PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 6.775e-37
Identity = 71/142 (50.00%), Postives = 99/142 (69.72%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDK-YSLAAVTNDIFTKEDGEFLMR--NGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFK-ADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            +GIGGPVG+GKTA++  +   L ++      +TND+ T ED + + R  NG L EE+I  VETG CPH A+RED S+N+  +EEL + +  +D++L ESGGDNL   FS  LAD+ IY+I+V+ GDKIPRK G G+ Q+D+L
Sbjct:    7 IGIGGPVGSGKTAVIETITPRLIERGIKPLIITNDVVTTEDAKQVRRTLNGVLIEEKIVGVETGACPHTAVREDPSMNIAAVEELEDKYPDSDVILIESGGDNLTLTFSPALADFYIYVIDVAAGDKIPRKNGAGVCQSDIL 148          

HSP 2 Score: 36.5798 bits (83), Expect = 6.775e-37
Identity = 17/40 (42.50%), Postives = 25/40 (62.50%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHIL 716
            +GA L VM RD+  MR   PF+F   K G G+++++  IL
Sbjct:  159 VGASLEVMARDSKIMRGKKPFLFTNCKTGEGIDDLLRLIL 198          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_ARCB4 (Urease accessory protein ureG OS=Arcobacter butzleri (strain RM4018) GN=ureG PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 7.516e-37
Identity = 77/138 (55.80%), Postives = 97/138 (70.29%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFKADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            +GI GPVG+GKT+L+ +L   L+DKYSL  VTNDI+T ED  +L +   L  ERI  VETGGCPH AIR+DIS+N   + EL   F  D++  ESGGDNL+A FS EL DY IY+I+V+ G  IPRK G G+  +DLL
Sbjct:    5 IGIAGPVGSGKTSLIESLTNLLKDKYSLGIVTNDIYTTEDANYLKKTLDLDNERIIGVETGGCPHTAIRDDISMNQKAVVELEEKFNPDIVFVESGGDNLSATFSYELIDYYIYVIDVAQGADIPRKKGAGLLFSDLL 142          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_TRIEI (Urease accessory protein ureG OS=Trichodesmium erythraeum (strain IMS101) GN=ureG PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 8.828e-37
Identity = 74/143 (51.75%), Postives = 98/143 (68.53%), Query Frame = 1
Query:  172 AFTVGIGGPVGTGKTALMLALCKFLRDK-YSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLF-KADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            A  +GIGGPVG+GKTAL+  +   L ++   +A VTND+ T ED E L   G LP +RI  VETG CPH AIRED ++N+  +++L  LF   +L++ ESGGDNLA+ FS +L D  I++I+V  GD IPRK GPG  QADL+
Sbjct:    4 AARLGIGGPVGSGKTALLECIVPLLTNQGIEVAIVTNDLLTTEDAERLKSGGILPRDRIIGVETGSCPHTAIREDPTMNILAVQDLEQLFPNLNLIMIESGGDNLASTFSYDLVDAYIFVIDVGAGDDIPRKKGPGFMQADLV 146          

HSP 2 Score: 31.187 bits (69), Expect = 8.828e-37
Identity = 13/41 (31.71%), Postives = 24/41 (58.54%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHILQ 719
            + A+L ++ ++A   R   P  +   K G+G+ E+VN IL+
Sbjct:  157 VNANLNLIRKEASVYRQSKPIAYTNCKTGVGLNEVVNFILE 197          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_YEREN (Urease accessory protein ureG OS=Yersinia enterocolitica GN=ureG PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.497e-36
Identity = 71/142 (50.00%), Postives = 97/142 (68.31%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDK-YSLAAVTNDIFTKEDGEFLMRN--GALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFK-ADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            +GIGGPVG+GKTA++  +   L  +      +TNDI T ED + + R   G L EE+I  VETG CPH A+RED S+N+  +EE+   F  ++L++ ESGGDNL   FS  LAD+ IY+I+V+ G+KIPRK GPG+ QAD+L
Sbjct:   15 IGIGGPVGSGKTAIIEVITPILIKRGIKPLIITNDIVTTEDAKQVKRTLKGILDEEKILGVETGACPHTAVREDPSMNIAAVEEMEERFPDSNLIMIESGGDNLTLTFSPALADFYIYVIDVAEGEKIPRKNGPGLVQADIL 156          

HSP 2 Score: 35.8094 bits (81), Expect = 1.497e-36
Identity = 17/41 (41.46%), Postives = 25/41 (60.98%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHILQ 719
            +GA L VME D   +R   P+I    K G G+EE+V+ I++
Sbjct:  167 VGASLDVMESDTKVVRGERPYILTNCKTGQGIEELVDMIMR 207          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG2_METRJ (Urease accessory protein ureG 2 OS=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) GN=ureG2 PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.953e-36
Identity = 73/143 (51.05%), Postives = 97/143 (67.83%), Query Frame = 1
Query:  172 AFTVGIGGPVGTGKTALMLALCKFLRDK-YSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFKA-DLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            A  +GIGGPVG+GKTAL+  L   L+ +   LA +TND+ TKED E L R+G +   R+ AVE G CPH  IRED ++N+   + L   F    LL+ ESGGDNLA+ FS +L D+ I++I+V+GGD IPRK GPG+ + DLL
Sbjct:    9 AARIGIGGPVGSGKTALIERLIPVLQARGVDLAVITNDLVTKEDAERLRRSGLIDPSRVEAVEAGACPHTVIREDPTLNIAAGDALEARFPGLQLLVFESGGDNLASTFSLDLVDWWIFVIDVAGGDDIPRKRGPGVLRCDLL 151          

HSP 2 Score: 31.9574 bits (71), Expect = 1.953e-36
Identity = 15/42 (35.71%), Postives = 24/42 (57.14%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHILQA 722
            +G DL  M  +A R+R G P I    + GLG++ + + I +A
Sbjct:  162 VGVDLEGMLAEAARVRGGKPVIATNARAGLGIDRVADAIGRA 203          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG2_METEP (Urease accessory protein ureG 2 OS=Methylobacterium extorquens (strain PA1) GN=ureG2 PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 4.313e-36
Identity = 69/142 (48.59%), Postives = 98/142 (69.01%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALC-KFLRDKYSLAAVTNDIFTKEDGEFLMR--NGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFK-ADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            +GIGGPVG+GKTA++  +  + +        +TND+ T ED + + R  +G L EE+I  VETG CPH A+RED S+N+  +EEL + +  +D++L ESGGDNL   FS  LAD+ IY+I+V+ GDKIPRK G G+ Q+D+L
Sbjct:    7 IGIGGPVGSGKTAVIETITPRLIALGIKPLIITNDVVTTEDAKQVRRTLHGVLIEEKIVGVETGACPHTAVREDPSMNIAAVEELEDKYPDSDVILIESGGDNLTLTFSPALADFYIYVIDVAAGDKIPRKNGAGVCQSDIL 148          

HSP 2 Score: 37.3502 bits (85), Expect = 4.313e-36
Identity = 18/40 (45.00%), Postives = 25/40 (62.50%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHIL 716
            +GA L VM RD+  MR   PF+F   K G GV++++  IL
Sbjct:  159 VGASLEVMARDSKLMRGKKPFLFTNCKTGEGVDDLLQLIL 198          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG2_STRGG (Urease accessory protein ureG 2 OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=ureG2 PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.960e-34
Identity = 70/148 (47.30%), Postives = 98/148 (66.22%), Query Frame = 1
Query:  163 NERAFTVGIGGPVGTGKTALMLALCKFLRDK-YSLAAVTNDIFTKEDGEFLMRN--GALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFK-ADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            ++    VGIGGPVG+GKTAL+ AL   L ++ +  A +TNDI+T+ED + + R   G L  ER+  VETG CPH A+R+D ++NL    E+   F   D LL ESGGDNL   FS  L D  +++++ + G+K+PRK GPGIT++DLL
Sbjct:   21 DDNVLRVGIGGPVGSGKTALIEALVPVLIERGHRPAVITNDIYTQEDAQHVRRTLAGVLEPERVVGVETGACPHTAVRDDPTMNLAAGAEMLERFPDTDTLLYESGGDNLTLTFSPALVDLFLFVLDTAEGEKMPRKRGPGITESDLL 168          

HSP 2 Score: 31.9574 bits (71), Expect = 2.960e-34
Identity = 12/39 (30.77%), Postives = 23/39 (58.97%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHI 713
            +  D+ +ME DA R+RD  P +      G+G+++I  ++
Sbjct:  179 VRTDIGIMEADAHRVRDDRPVVLTDCLTGVGIDDIALYL 217          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_HALWD (Urease accessory protein ureG OS=Haloquadratum walsbyi (strain DSM 16790) GN=ureG PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.955e-34
Identity = 78/142 (54.93%), Postives = 99/142 (69.72%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDK-YSLAAVTNDIFTKEDGEFLMRN--GALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLF-KADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            VG+GGPVG+GKTAL+  L   L D  Y L  + NDI T+ED + L  +  G + ++ I  VETG CPH  IRED S+NL  ++E S    + D++L ESGGDNLAA F+ ELADY I++I+V+ GD IPRK GPGITQADLL
Sbjct:    9 VGLGGPVGSGKTALVQQLVPRLDDAGYDLGVIANDIMTQEDAQRLQSSFAGQIEKDLIAGVETGACPHTGIREDPSMNLDKIDEFSESHPELDVVLIESGGDNLAATFNPELADYFIFVISVAEGDDIPRKRGPGITQADLL 150          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_MYCGI (Urease accessory protein ureG OS=Mycobacterium gilvum (strain PYR-GCK) GN=ureG PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.585e-33
Identity = 75/143 (52.45%), Postives = 96/143 (67.13%), Query Frame = 1
Query:  172 AFTVGIGGPVGTGKTALMLALCKFLRDK-YSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLF-KADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            A  +GIGGPVG+GKT L+  L   L     S+A +TND+ T ED + + R+G +  ER+ AVETG CPH AIRED S NL   E L+  F   D++L ESGGDNLAA F+ +L DY I++I+ + GD IPRK G G+ QADLL
Sbjct:    4 AIRIGIGGPVGSGKTRLVETLVPRLSAAGLSVAVITNDLVTDEDAQRVRRSGVIDPERVLAVETGACPHTAIREDPSANLAAAERLNRRFGDLDVILIESGGDNLAATFTSDLVDYWIFVIDTAAGDDIPRKKGIGLLQADLL 146          
The following BLAST results are available for this feature:
BLAST of CK936512 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 253
Match NameE-valueIdentityDescription
UREG_YERE83.990e-3750.70Urease accessory protein ureG OS=Yersinia enteroco... [more]
UREG2_METPB6.775e-3750.00Urease accessory protein ureG 2 OS=Methylobacteriu... [more]
UREG_ARCB47.516e-3755.80Urease accessory protein ureG OS=Arcobacter butzle... [more]
UREG_TRIEI8.828e-3751.75Urease accessory protein ureG OS=Trichodesmium ery... [more]
UREG_YEREN1.497e-3650.00Urease accessory protein ureG OS=Yersinia enteroco... [more]
UREG2_METRJ1.953e-3651.05Urease accessory protein ureG 2 OS=Methylobacteriu... [more]
UREG2_METEP4.313e-3648.59Urease accessory protein ureG 2 OS=Methylobacteriu... [more]
UREG2_STRGG2.960e-3447.30Urease accessory protein ureG 2 OS=Streptomyces gr... [more]
UREG_HALWD5.955e-3454.93Urease accessory protein ureG OS=Haloquadratum wal... [more]
UREG_MYCGI6.585e-3352.45Urease accessory protein ureG OS=Mycobacterium gil... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004521_E09 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0001_IVF_E09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936512 ID=CK936512; Name=CK936512; organism=Citrus sinensis; type=EST; length=740bp
ACCCATGAAAAAAATCATGGTGATTCAACAGCAACATCATGGGTGGGGTC
AGATGGGAGGGTGTATCATAGCCATGATGGACTGGCGCCACACTCGCACG
AACCCATTTACTCTCCAGGCTATTTCAGCAGAAGAGCTCCGCCTATTCTC
AGCAGAAATTTCAATGAGAGAGCTTTTACCGTTGGCATTGGTGGCCCTGT
TGGTACTGGGAAAACAGCTTTAATGCTGGCTTTGTGTAAATTCTTGCGGG
ACAAGTACAGTCTTGCAGCTGTCACAAATGATATTTTCACAAAAGAAGAT
GGTGAATTCCTGATGCGGAATGGTGCTCTGCCTGAGGAGAGAATACGTGC
TGTGGAAACAGGTGGATGTCCTCATGCTGCAATTCGTGAAGACATCAGCA
TCAATCTGGGCCCTCTCGAGGAACTTTCTAACTTGTTCAAAGCAGACCTA
CTTCTTTGCGAATCTGGGGGAGATAATTTAGCTGCCAACTTCAGCAGGGA
ACTTGCAGACTATATCATTTATATAATAAACGTTTCTGGTGGTGATAAAA
TTCCTCGGAAAGGTGGCCCAGGCATCACCCAAGCTGACCTTCTGCAATAG
GAGCTGACTTAGCAGTAATGGAGCGTGATGCACTCCGGATGCGTGATGGA
GGGCCTTTTATCTTCGCTCAGGTCAAGCATGGGCTTGGTGTGGAGGAAAT
AGTGAATCACATTTTACAGGCTTGGGAAGCANNNNCAGGG
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