CK936512

Overview
NameCK936512
Unique NameCK936512
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length740
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_SULTO (Urease accessory protein ureG OS=Sulfolobus tokodaii GN=ureG PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 2.032e-32
Identity = 62/145 (42.76%), Postives = 92/145 (63.45%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFL--RDKYSLAAVTNDIFTKEDG-----EFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFKADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            +G+ GPVG+GKT L+  L ++L  ++  S+  +TND+ +  D        +++   LP+E +  + TGGCPH AIRED S+NL  LE L      D++  ESGGDN+ + FS  LADY I++++ + GDK P KGG GI ++DLL
Sbjct:    4 IGVLGPVGSGKTTLIEFLTEYLVKKEGLSVGIITNDVISSHDALRIYQNLVLKEKLLPKENVIGIVTGGCPHTAIREDPSVNLRALETLMKRTSLDVIFIESGGDNVMSTFSPILADYTIFVLDTAAGDKYPGKGGLGIQESDLL 148          

HSP 2 Score: 35.039 bits (79), Expect = 2.032e-32
Identity = 15/39 (38.46%), Postives = 25/39 (64.10%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHI 713
            +GADL  M RDA ++R   P +F  +K G G+++++  I
Sbjct:  159 VGADLEKMRRDAEKIRKDKPTVFISLKTGDGIDDLIKII 197          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_CENSY (Urease accessory protein ureG OS=Cenarchaeum symbiosum GN=ureG PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 3.059e-30
Identity = 70/145 (48.28%), Postives = 97/145 (66.90%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDK-YSLAAVTNDIFTKEDGEFLMRN-----GALPEERIRAVETGGCPHAAIREDISINLGPLEEL-SNLFKADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            VGIGGPVG GK+ L+  +   L  + Y ++ V+ND+ +KED + +  +     G LPE+ +  V TGGCPH A+RED S+N+  +EE+ +   + DL++ ESGGDN+   FS  LADY IY+I+V+GGDK PRKGG GI   DLL
Sbjct:    7 VGIGGPVGAGKSMLIERVVPVLAARGYHVSIVSNDVISKEDADRMRASLATERGLLPEDLVVGVATGGCPHTAVREDPSMNISIIEEIEAGHPELDLVIIESGGDNITTTFSPALADYFIYMIDVAGGDKYPRKGGLGIESCDLL 151          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_METS5 (Urease accessory protein ureG OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=ureG PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.134e-27
Identity = 66/144 (45.83%), Postives = 89/144 (61.81%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDK-YSLAAVTNDIFTKEDGEFLMRN-----GALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFKADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            VGI GPVG+GKT+L+  L K   ++   +  +TND+ +  D   +  N       LP E +  + TGGCPH AIRED S+NL  LE L      DL+  ESGGDN+ + FS  LAD+ I++++ S GDK P KGG GIT++DLL
Sbjct:    4 VGILGPVGSGKTSLIEFLAKEYSERGIKVGILTNDVVSAYDAMRIYHNLVERLRILPRENVLGLVTGGCPHTAIREDPSLNLRALETLEERANPDLVFIESGGDNVMSTFSSSLADFTIFVLDTSAGDKYPGKGGIGITESDLL 147          
The following BLAST results are available for this feature:
BLAST of CK936512 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 253
Match NameE-valueIdentityDescription
UREG_SULTO2.032e-3242.76Urease accessory protein ureG OS=Sulfolobus tokoda... [more]
UREG_CENSY3.059e-3048.28Urease accessory protein ureG OS=Cenarchaeum symbi... [more]
UREG_METS54.134e-2745.83Urease accessory protein ureG OS=Metallosphaera se... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004521_E09 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0001_IVF_E09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936512 ID=CK936512; Name=CK936512; organism=Citrus sinensis; type=EST; length=740bp
ACCCATGAAAAAAATCATGGTGATTCAACAGCAACATCATGGGTGGGGTC
AGATGGGAGGGTGTATCATAGCCATGATGGACTGGCGCCACACTCGCACG
AACCCATTTACTCTCCAGGCTATTTCAGCAGAAGAGCTCCGCCTATTCTC
AGCAGAAATTTCAATGAGAGAGCTTTTACCGTTGGCATTGGTGGCCCTGT
TGGTACTGGGAAAACAGCTTTAATGCTGGCTTTGTGTAAATTCTTGCGGG
ACAAGTACAGTCTTGCAGCTGTCACAAATGATATTTTCACAAAAGAAGAT
GGTGAATTCCTGATGCGGAATGGTGCTCTGCCTGAGGAGAGAATACGTGC
TGTGGAAACAGGTGGATGTCCTCATGCTGCAATTCGTGAAGACATCAGCA
TCAATCTGGGCCCTCTCGAGGAACTTTCTAACTTGTTCAAAGCAGACCTA
CTTCTTTGCGAATCTGGGGGAGATAATTTAGCTGCCAACTTCAGCAGGGA
ACTTGCAGACTATATCATTTATATAATAAACGTTTCTGGTGGTGATAAAA
TTCCTCGGAAAGGTGGCCCAGGCATCACCCAAGCTGACCTTCTGCAATAG
GAGCTGACTTAGCAGTAATGGAGCGTGATGCACTCCGGATGCGTGATGGA
GGGCCTTTTATCTTCGCTCAGGTCAAGCATGGGCTTGGTGTGGAGGAAAT
AGTGAATCACATTTTACAGGCTTGGGAAGCANNNNCAGGG
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