CK936512

Overview
NameCK936512
Unique NameCK936512
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length740
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_ACIB3 (Urease accessory protein ureG OS=Acinetobacter baumannii (strain AB307-0294) GN=ureG PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 6.999e-53
Identity = 91/139 (65.47%), Postives = 112/139 (80.58%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFKA-DLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            VGIGGPVG+GKTAL L LC+ LRDKY++A VTNDI+TKED  FL RN A+  +RI  VETGGCPH AIRED SINL  +++L   F   +L++ ESGGDNLAA FS EL+D  +Y+I+V+GG+KIPRKGGPGIT++DLL
Sbjct:    9 VGIGGPVGSGKTALTLNLCRALRDKYNMAVVTNDIYTKEDSNFLTRNEAMSPDRIVGVETGGCPHTAIREDASINLAAIDDLCEKFDGLELIIIESGGDNLAATFSPELSDLTLYVIDVAGGEKIPRKGGPGITKSDLL 147          

HSP 2 Score: 40.4318 bits (93), Expect = 6.999e-53
Identity = 19/39 (48.72%), Postives = 28/39 (71.79%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHI 713
            +GA+L VM++DA RMR   PF+F+ +K   G+EEI+  I
Sbjct:  158 VGANLDVMDQDAKRMRGEKPFLFSNMKTQDGLEEIIQFI 196          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_PSEF5 (Urease accessory protein ureG OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=ureG PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 1.189e-52
Identity = 94/145 (64.83%), Postives = 115/145 (79.31%), Query Frame = 1
Query:  163 NERAFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFKA-DLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            N +   VGIGGPVG+GKTAL LALC  LR++Y+LA VTNDI+T+ED +FL+RN AL  ERI  VETGGCPH AIRED SINL  +++L+  F   DL+L ESGGDNL+A FS EL+D  IY+I+VS GDK+PRKGGPGI ++DLL
Sbjct:    2 NAQPLRVGIGGPVGSGKTALTLALCLALRERYNLAVVTNDIYTREDADFLVRNEALAPERIIGVETGGCPHTAIREDASINLEAVDQLNRRFPGLDLILVESGGDNLSATFSPELSDLTIYVIDVSAGDKLPRKGGPGICKSDLL 146          

HSP 2 Score: 38.1206 bits (87), Expect = 1.189e-52
Identity = 17/39 (43.59%), Postives = 24/39 (61.54%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHI 713
            +GA L +M  D  RMR G PF+F+  K G G+ +I+  I
Sbjct:  157 VGASLEMMNSDTQRMRGGKPFVFSNQKTGQGLADIIAFI 195          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_PSEA7 (Urease accessory protein ureG OS=Pseudomonas aeruginosa (strain PA7) GN=ureG PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.189e-52
Identity = 92/139 (66.19%), Postives = 114/139 (82.01%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFKA-DLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            VGIGGPVG+GKTAL LALC+ LR++Y+LA VTNDI+T+ED +FL+RN AL  ERI  VETGGCPH AIRED SINL  +++L+  F   +L+L ESGGDNL+A FS EL+D  +Y+I+VS GDKIPRKGGPGI ++DLL
Sbjct:    8 VGIGGPVGSGKTALTLALCRELRERYNLAVVTNDIYTQEDAQFLVRNEALAPERIIGVETGGCPHTAIREDASINLEAVDQLNRRFPGLELILVESGGDNLSATFSPELSDLTLYVIDVSAGDKIPRKGGPGICKSDLL 146          

HSP 2 Score: 40.4318 bits (93), Expect = 1.189e-52
Identity = 19/39 (48.72%), Postives = 25/39 (64.10%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHI 713
            +GA L VM+ DA RMR   PF+F+  K G G+ EI+  I
Sbjct:  157 VGASLEVMDEDARRMRGDKPFVFSNQKTGQGLAEIIAFI 195          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_METSB (Urease accessory protein ureG OS=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) GN=ureG PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 3.434e-52
Identity = 92/141 (65.25%), Postives = 112/141 (79.43%), Query Frame = 1
Query:  175 FTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFKA-DLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            F +GIGGPVG+GKTAL   LCK +R+++++AA+TNDI+TKED EFL R+ AL  ERI  VETGGCPH AIRED SINL  ++ ++  F   DL+  ESGGDNLAA FS ELAD  IY+I+VS GDKIPRKGGPGIT++DLL
Sbjct:    8 FRIGIGGPVGSGKTALTDRLCKAMRERWNIAAITNDIYTKEDAEFLTRSAALAPERIMGVETGGCPHTAIREDASINLAAVDAMNARFPGLDLVFIESGGDNLAATFSPELADLTIYVIDVSAGDKIPRKGGPGITRSDLL 148          

HSP 2 Score: 38.5058 bits (88), Expect = 3.434e-52
Identity = 19/39 (48.72%), Postives = 25/39 (64.10%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHI 713
            + A L VM+RD+ +MR   PF+F  +K  LGV EIV  I
Sbjct:  159 VEASLEVMDRDSRKMRGEKPFLFTNLKTNLGVAEIVAFI 197          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_RHIME (Urease accessory protein ureG OS=Rhizobium meliloti GN=ureG PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 3.435e-52
Identity = 89/139 (64.03%), Postives = 109/139 (78.42%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELS-NLFKADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            +GIGGPVG+GKTAL   LCK +R+KYS+A VTNDI+TKED E L+R  ALP ERI  VETGGCPH AIRED SINL  + +L+  +   D++  ESGGDNLAA FS +LAD  IY+I+V  G++IPRKGGPGIT++DLL
Sbjct:   10 IGIGGPVGSGKTALTDKLCKAMREKYSVAVVTNDIYTKEDAEALVRMQALPSERIVGVETGGCPHTAIREDASINLQAIADLNRRIPDLDVVFIESGGDNLAATFSPDLADLTIYVISVCQGEEIPRKGGPGITRSDLL 148          

HSP 2 Score: 48.9062 bits (115), Expect = 3.435e-52
Identity = 23/39 (58.97%), Postives = 28/39 (71.79%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHI 713
            +GADL VMERDA RMR   PF+F+ +K G GVE IV  +
Sbjct:  159 VGADLGVMERDAARMRAEKPFVFSDMKRGDGVERIVEFL 197          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_MAGSM (Urease accessory protein ureG OS=Magnetococcus sp. (strain MC-1) GN=ureG PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 4.478e-52
Identity = 86/139 (61.87%), Postives = 109/139 (78.42%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLF-KADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            VG+GGPVG+GKTAL+  LC+ ++  YS+AA+TNDI+TKED   L  +GALP ERI  VETGGCPH AIRED S+NL  +E++   F   +L+  ESGGDNLAA FS ELAD  +Y+I+V+ G+KIPRKGGPGIT++DLL
Sbjct:    7 VGVGGPVGSGKTALLEWLCREMQQHYSVAAITNDIYTKEDQRILTASGALPAERIMGVETGGCPHTAIREDASMNLAAVEDMQLRFADLELIFIESGGDNLAATFSPELADLTLYVIDVAAGEKIPRKGGPGITRSDLL 145          

HSP 2 Score: 48.1358 bits (113), Expect = 4.478e-52
Identity = 21/41 (51.22%), Postives = 29/41 (70.73%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHILQ 719
            +GADLAVME+D LRMR   PF+F  +K G GV  I+  +++
Sbjct:  156 VGADLAVMEQDTLRMRGSRPFVFTNLKQGDGVAAIIQFLVE 196          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_JANMA (Urease accessory protein ureG OS=Janthinobacterium sp. (strain Marseille) GN=ureG PE=3 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 5.834e-52
Identity = 92/139 (66.19%), Postives = 109/139 (78.42%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLF-KADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            VGIGGPVG+GKTAL   LCK +RD Y +A +TNDI+TKED E L+R  ALP ER+  VETGGCPH AIRED SINL  +  +S  F   DL+L ESGGDNLAA FS EL+D  IY+I+V+GG+KIPRKGGPGIT++DLL
Sbjct:   12 VGIGGPVGSGKTALCEMLCKRMRDNYDMAVITNDIYTKEDMEILLRADALPAERLMGVETGGCPHTAIREDASINLEAIARMSADFPDLDLILVESGGDNLAATFSPELSDLTIYVIDVAGGEKIPRKGGPGITRSDLL 150          

HSP 2 Score: 40.817 bits (94), Expect = 5.834e-52
Identity = 17/39 (43.59%), Postives = 27/39 (69.23%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHI 713
            +GA+L +M +DA RMR   PF+F  ++ G GVE ++ +I
Sbjct:  161 VGANLDIMAQDAKRMRGERPFVFTNLRSGDGVETVIEYI 199          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_SYNS3 (Urease accessory protein ureG OS=Synechococcus sp. (strain CC9311) GN=ureG PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 5.837e-52
Identity = 91/139 (65.47%), Postives = 111/139 (79.86%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFKA-DLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            +G+ GPVG+GKTAL+ ALC+ LRD+  LA VTNDI+T+ED +FL R+GAL  ERIR VETGGCPH AIRED SIN   + EL + F   DL++ ESGGDNLAA+FS EL D  IY+I+V+ GDKIPRKGGPGIT++DLL
Sbjct:    7 LGVAGPVGSGKTALVQALCRRLRDRLQLAVVTNDIYTQEDAQFLTRSGALEPERIRGVETGGCPHTAIREDCSINRAAVSELEHQFPGLDLVMVESGGDNLAASFSPELVDLCIYVIDVAAGDKIPRKGGPGITRSDLL 145          

HSP 2 Score: 39.6614 bits (91), Expect = 5.837e-52
Identity = 18/43 (41.86%), Postives = 27/43 (62.79%), Query Frame = 3
Query:  591 SAIGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHILQ 719
            S +GADL VME+D LRMR   P+ F  ++   G++ +   +LQ
Sbjct:  154 SFVGADLGVMEQDTLRMRRNRPWCFTNLRTEEGLDRVEEFVLQ 196          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_NITOC (Urease accessory protein ureG OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=ureG PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 7.608e-52
Identity = 89/145 (61.38%), Postives = 115/145 (79.31%), Query Frame = 1
Query:  163 NERAFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFK-ADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            +++   VGIGGPVG+GKT L L+LC  LR++Y++A VTNDI+T+ED +FL+R+ AL +ERI  VETGGCPH AIRED SINL  + +LS  F   DL+L ESGGDNLAA FS EL+D  +Y+I+V+ G+KIPRKGGPGI ++DLL
Sbjct:    2 SKQPLRVGIGGPVGSGKTTLTLSLCNALRNRYNVAVVTNDIYTEEDAQFLVRHQALAQERIIGVETGGCPHTAIREDASINLEAVAQLSQRFSDLDLILVESGGDNLAATFSPELSDLTLYVIDVAAGEKIPRKGGPGICKSDLL 146          

HSP 2 Score: 42.743 bits (99), Expect = 7.608e-52
Identity = 18/39 (46.15%), Postives = 29/39 (74.36%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHI 713
            +GA L VM+RDA +MR   PF+F+ +K G G+++I++ I
Sbjct:  157 VGASLEVMDRDARKMRGERPFLFSNLKSGEGLDQIIDFI 195          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_RALEH (Urease accessory protein ureG OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=ureG PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 9.913e-52
Identity = 89/139 (64.03%), Postives = 109/139 (78.42%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLF-KADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            VG+GGPVG+GKT L+  LCK +RD+Y L A+TNDI+TKED   L  +GALP ERI  VETGGCPH AIRED SINL  ++ +   F  AD++  ESGGDNLAA FS EL+D  IY+I+V+GG+KIPRKGGPGIT++DLL
Sbjct:   14 VGVGGPVGSGKTTLLEMLCKAMRDRYDLVAITNDIYTKEDQRLLTVSGALPAERIMGVETGGCPHTAIREDASINLEAVDRMLARFPDADVVFIESGGDNLAATFSPELSDLTIYVIDVAGGEKIPRKGGPGITKSDLL 152          

HSP 2 Score: 41.9726 bits (97), Expect = 9.913e-52
Identity = 18/39 (46.15%), Postives = 25/39 (64.10%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHI 713
            +GA L VME DA +MR   PF+   VK G G++E++  I
Sbjct:  163 VGASLEVMESDARKMRGARPFVMGSVKSGQGLDEVIRFI 201          
The following BLAST results are available for this feature:
BLAST of CK936512 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 253
Match NameE-valueIdentityDescription
UREG_ACIB36.999e-5365.47Urease accessory protein ureG OS=Acinetobacter bau... [more]
UREG_PSEF51.189e-5264.83Urease accessory protein ureG OS=Pseudomonas fluor... [more]
UREG_PSEA71.189e-5266.19Urease accessory protein ureG OS=Pseudomonas aerug... [more]
UREG_METSB3.434e-5265.25Urease accessory protein ureG OS=Methylocella silv... [more]
UREG_RHIME3.435e-5264.03Urease accessory protein ureG OS=Rhizobium melilot... [more]
UREG_MAGSM4.478e-5261.87Urease accessory protein ureG OS=Magnetococcus sp.... [more]
UREG_JANMA5.834e-5266.19Urease accessory protein ureG OS=Janthinobacterium... [more]
UREG_SYNS35.837e-5265.47Urease accessory protein ureG OS=Synechococcus sp.... [more]
UREG_NITOC7.608e-5261.38Urease accessory protein ureG OS=Nitrosococcus oce... [more]
UREG_RALEH9.913e-5264.03Urease accessory protein ureG OS=Ralstonia eutroph... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004521_E09 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0001_IVF_E09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936512 ID=CK936512; Name=CK936512; organism=Citrus sinensis; type=EST; length=740bp
ACCCATGAAAAAAATCATGGTGATTCAACAGCAACATCATGGGTGGGGTC
AGATGGGAGGGTGTATCATAGCCATGATGGACTGGCGCCACACTCGCACG
AACCCATTTACTCTCCAGGCTATTTCAGCAGAAGAGCTCCGCCTATTCTC
AGCAGAAATTTCAATGAGAGAGCTTTTACCGTTGGCATTGGTGGCCCTGT
TGGTACTGGGAAAACAGCTTTAATGCTGGCTTTGTGTAAATTCTTGCGGG
ACAAGTACAGTCTTGCAGCTGTCACAAATGATATTTTCACAAAAGAAGAT
GGTGAATTCCTGATGCGGAATGGTGCTCTGCCTGAGGAGAGAATACGTGC
TGTGGAAACAGGTGGATGTCCTCATGCTGCAATTCGTGAAGACATCAGCA
TCAATCTGGGCCCTCTCGAGGAACTTTCTAACTTGTTCAAAGCAGACCTA
CTTCTTTGCGAATCTGGGGGAGATAATTTAGCTGCCAACTTCAGCAGGGA
ACTTGCAGACTATATCATTTATATAATAAACGTTTCTGGTGGTGATAAAA
TTCCTCGGAAAGGTGGCCCAGGCATCACCCAAGCTGACCTTCTGCAATAG
GAGCTGACTTAGCAGTAATGGAGCGTGATGCACTCCGGATGCGTGATGGA
GGGCCTTTTATCTTCGCTCAGGTCAAGCATGGGCTTGGTGTGGAGGAAAT
AGTGAATCACATTTTACAGGCTTGGGAAGCANNNNCAGGG
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