CK936512

Overview
NameCK936512
Unique NameCK936512
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length740
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_PROM3 (Urease accessory protein ureG OS=Prochlorococcus marinus (strain MIT 9303) GN=ureG PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 9.917e-52
Identity = 91/139 (65.47%), Postives = 110/139 (79.14%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLF-KADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            +G+ GPVG+GKTAL+ A+C+ LRD+  LA VTNDI+T+ED EFL R GAL  ERIR VETGGCPH AIRED SIN   +E+L   F   D++L ESGGDNLAA+FS EL D  IY+I+V+ GDKIPRKGGPGIT++DLL
Sbjct:    7 LGVAGPVGSGKTALVEAICRRLRDQLQLAVVTNDIYTQEDAEFLTRVGALEPERIRGVETGGCPHTAIREDCSINRAAVEDLERNFPDLDVVLVESGGDNLAASFSPELVDLCIYVIDVAAGDKIPRKGGPGITRSDLL 145          

HSP 2 Score: 41.5874 bits (96), Expect = 9.917e-52
Identity = 19/41 (46.34%), Postives = 27/41 (65.85%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHILQ 719
            +GADL VM+RDA RMR   P+ F  +  G G+E ++  +LQ
Sbjct:  156 VGADLEVMKRDATRMRGERPWCFTNLHSGDGLESVLQFLLQ 196          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_PROMM (Urease accessory protein ureG OS=Prochlorococcus marinus (strain MIT 9313) GN=ureG PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 9.919e-52
Identity = 91/139 (65.47%), Postives = 110/139 (79.14%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLF-KADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            +G+ GPVG+GKTAL+ A+C+ LRD+  LA VTNDI+T+ED EFL R GAL  ERIR VETGGCPH AIRED SIN   +E+L   F   D++L ESGGDNLAA+FS EL D  IY+I+V+ GDKIPRKGGPGIT++DLL
Sbjct:    7 LGVAGPVGSGKTALVEAMCRRLRDQLQLAVVTNDIYTQEDAEFLTRVGALEPERIRGVETGGCPHTAIREDCSINRAAVEDLERNFPDLDVVLVESGGDNLAASFSPELVDLCIYVIDVAAGDKIPRKGGPGITRSDLL 145          

HSP 2 Score: 41.5874 bits (96), Expect = 9.919e-52
Identity = 18/41 (43.90%), Postives = 28/41 (68.29%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHILQ 719
            +GADL VM+RD  RMR   P+ F  ++ G G+E +++ +LQ
Sbjct:  156 VGADLEVMKRDTTRMRGERPWCFTNLRSGDGLESVLHFLLQ 196          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_SYNS9 (Urease accessory protein ureG OS=Synechococcus sp. (strain CC9902) GN=ureG PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 9.919e-52
Identity = 89/139 (64.03%), Postives = 108/139 (77.70%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFKA-DLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            +G+ GPVG+GKTAL+ ALC+ L ++  LA VTNDI+T+ED +FL R G LP ERIR VETGGCPH AIRED SIN   + +L   F   DL+L ESGGDNLAA+FS EL D  IY+I+V+ GDKIPRKGGPGIT++DLL
Sbjct:    7 LGVAGPVGSGKTALVEALCRELCERLELAVVTNDIYTQEDAQFLTRAGVLPPERIRGVETGGCPHTAIREDCSINRAAVGDLEAQFPGLDLVLVESGGDNLAASFSPELVDLCIYVIDVAAGDKIPRKGGPGITRSDLL 145          

HSP 2 Score: 45.8246 bits (107), Expect = 9.919e-52
Identity = 19/41 (46.34%), Postives = 29/41 (70.73%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHILQ 719
            +GADL+VME D  RMR   P+ F  +K+G+G+ ++V  +LQ
Sbjct:  156 VGADLSVMEHDTQRMRGDRPWCFTNLKNGVGLNQVVEFVLQ 196          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_ACIAD (Urease accessory protein ureG OS=Acinetobacter sp. (strain ADP1) GN=ureG PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 1.293e-51
Identity = 90/139 (64.75%), Postives = 112/139 (80.58%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFKA-DLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            VGIGGPVG+GKTAL L LC+ LR+KY++A VTNDI+TKED  FL RN A+  +RI  VETGGCPH AIRED SINL  +++L   F   +L++ ESGGDNLAA FS EL+D  +Y+I+V+GG+KIPRKGGPGIT++DLL
Sbjct:    9 VGIGGPVGSGKTALTLNLCRALRNKYNMAVVTNDIYTKEDSNFLTRNEAMTPDRIVGVETGGCPHTAIREDASINLAAIDDLCEKFDGLELIIIESGGDNLAATFSPELSDLTLYVIDVAGGEKIPRKGGPGITKSDLL 147          

HSP 2 Score: 38.1206 bits (87), Expect = 1.293e-51
Identity = 18/39 (46.15%), Postives = 27/39 (69.23%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHI 713
            +GA+L VME+DA RMR   PF+F+ +K   G+ +I+  I
Sbjct:  158 VGANLDVMEQDAKRMRGEKPFLFSNMKTEDGLTQIIEFI 196          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_RHISN (Urease accessory protein ureG OS=Rhizobium sp. (strain NGR234) GN=ureG PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.293e-51
Identity = 90/139 (64.75%), Postives = 109/139 (78.42%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELS-NLFKADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            VGIGGPVG+GKTAL   LCK +R+KYS+A VTNDI+TKED E L+R  ALP ERI  VETGGCPH AIRED SINL  + +L+  +   D++  ESGGDNLAA FS +LAD  IY+I+V  G++IPRKGGPGIT++DLL
Sbjct:   10 VGIGGPVGSGKTALTDKLCKAMREKYSVAVVTNDIYTKEDAEALVRMQALPSERIVGVETGGCPHTAIREDASINLQAIADLNRRIPDLDVVFIESGGDNLAATFSPDLADLTIYVISVCQGEEIPRKGGPGITKSDLL 148          

HSP 2 Score: 46.595 bits (109), Expect = 1.293e-51
Identity = 21/39 (53.85%), Postives = 27/39 (69.23%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHI 713
            +GADL VME DA RMR   PF+F+ +K G G+E IV  +
Sbjct:  159 VGADLEVMEHDATRMRAEKPFVFSDMKRGEGIERIVEFL 197          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_HAHCH (Urease accessory protein ureG OS=Hahella chejuensis (strain KCTC 2396) GN=ureG PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 2.197e-51
Identity = 87/139 (62.59%), Postives = 113/139 (81.29%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFKA-DLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            VGIGGPVG+GKTAL+  LC+ LR+++++A VTNDI+T+ED +FL+R+ AL E+RI  VETGGCPH AIRED S+NL  ++ L+      DL+L ESGGDNL+A FS EL+D  +Y+I+VS GDKIPRKGGPGIT++DLL
Sbjct:    8 VGIGGPVGSGKTALVARLCQELRERFNIAVVTNDIYTEEDAQFLIRHQALTEDRIIGVETGGCPHTAIREDASMNLAAIDTLTARHPGLDLVLVESGGDNLSATFSPELSDLTLYVIDVSAGDKIPRKGGPGITKSDLL 146          

HSP 2 Score: 43.8986 bits (102), Expect = 2.197e-51
Identity = 19/40 (47.50%), Postives = 29/40 (72.50%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHIL 716
            +GA L VM+RDA +MR   PFIF+ +K G G+++I+  I+
Sbjct:  157 VGASLEVMDRDARKMRGDKPFIFSNMKTGEGLQDIIRFII 196          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_RALME (Urease accessory protein ureG OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=ureG PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 6.340e-51
Identity = 90/150 (60.00%), Postives = 112/150 (74.67%), Query Frame = 1
Query:  148 LSRNFNERAFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLF-KADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            ++R        VG+GGPVG+GKT L+  LCK +RD+Y L A+TNDI+TKED   L  +GALP ERI  VETGGCPH AIRED SINL  ++ +   F  AD++  ESGGDNLAA FS EL+D  IY+I+V+GG+KIPRKGGPGIT++DLL
Sbjct:    1 MTRTKKNPPLRVGVGGPVGSGKTTLLEMLCKAMRDRYDLVAITNDIYTKEDQRLLTISGALPAERIMGVETGGCPHTAIREDASINLEAVDRMLAKFPDADVVFIESGGDNLAATFSPELSDLTIYVIDVAGGEKIPRKGGPGITKSDLL 150          

HSP 2 Score: 38.891 bits (89), Expect = 6.340e-51
Identity = 16/39 (41.03%), Postives = 25/39 (64.10%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHI 713
            +GA L +ME DA +MR   PF+   VK G G+++++  I
Sbjct:  161 VGASLEIMESDARKMRGERPFVMGSVKSGQGLDQVIAFI 199          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_VIBPA (Urease accessory protein ureG OS=Vibrio parahaemolyticus GN=ureG PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 8.261e-51
Identity = 88/139 (63.31%), Postives = 109/139 (78.42%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFK-ADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            +G+GGPVG+GKTAL+  LCK +RDKY +A VTNDI+T+ED + L R  AL  +RI  VETGGCPH AIRED S+NL  +EEL+   K  DL+  ESGGDNL+A FS ELAD  IY+I+V+ G+KIPRKGGPGIT++DLL
Sbjct:   15 IGVGGPVGSGKTALLEILCKTIRDKYQIAVVTNDIYTQEDAKILTRAQALDADRIIGVETGGCPHTAIREDASMNLAAVEELAKRHKNLDLVFVESGGDNLSATFSPELADLTIYVIDVAEGEKIPRKGGPGITRSDLL 153          

HSP 2 Score: 42.3578 bits (98), Expect = 8.261e-51
Identity = 17/40 (42.50%), Postives = 28/40 (70.00%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHIL 716
            +GA L VME D  RMR   P++F  +K G+G+++I++ I+
Sbjct:  164 VGASLDVMEADTARMRPEKPYVFTNLKEGIGLQKIIDFIV 203          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_PSYIN (Urease accessory protein ureG OS=Psychromonas ingrahamii (strain 37) GN=ureG PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 8.266e-51
Identity = 88/139 (63.31%), Postives = 108/139 (77.70%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLF-KADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            +G+GGPVG+GKTAL+  LC  LRDKY +A VTNDI+T ED +FL RN AL E+RI  VETGGCPH AIRED S+NL  +++L       D +L ESGGDNL+A FS EL+D  +Y+I+VS GDKIPRKGGPGIT++DLL
Sbjct:    9 IGVGGPVGSGKTALLSQLCLALRDKYDMAVVTNDIYTHEDAQFLTRNNALAEDRIIGVETGGCPHTAIREDASMNLAAIDDLHERHPNLDFVLVESGGDNLSATFSPELSDLTLYVIDVSAGDKIPRKGGPGITKSDLL 147          

HSP 2 Score: 38.891 bits (89), Expect = 8.266e-51
Identity = 17/39 (43.59%), Postives = 26/39 (66.67%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHI 713
            +GA L VM+RD  +MR   PF+F+ +K   G+ EI++ I
Sbjct:  158 VGASLEVMDRDTKKMRGDRPFVFSNMKTQQGLAEIIDFI 196          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_SYNSC (Urease accessory protein ureG OS=Synechococcus sp. (strain CC9605) GN=ureG PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 8.268e-51
Identity = 92/139 (66.19%), Postives = 109/139 (78.42%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLF-KADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            +G+ GPVG+GKTAL+ ALC+ LRD   LA VTNDI+T+ED +FL R GAL  ERIR VETGGCPH AIRED SIN   + EL   F + DL+L ESGGDNLAA+FS EL D  IY+I+V+ GDKIPRKGGPGIT++DLL
Sbjct:    7 LGVAGPVGSGKTALVEALCRRLRDDLQLAVVTNDIYTQEDAQFLTRAGALDPERIRGVETGGCPHTAIREDCSINRAAVAELEAQFPELDLVLVESGGDNLAASFSPELVDLCIYVIDVAAGDKIPRKGGPGITRSDLL 145          

HSP 2 Score: 38.891 bits (89), Expect = 8.268e-51
Identity = 17/41 (41.46%), Postives = 27/41 (65.85%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHILQ 719
            +GADLA+ME+D  RMR   P+ F  +  G G+E+++  + Q
Sbjct:  156 VGADLALMEQDTRRMRGDRPWCFTNLHSGEGLEQVLAFLSQ 196          
The following BLAST results are available for this feature:
BLAST of CK936512 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 253
Match NameE-valueIdentityDescription
UREG_PROM39.917e-5265.47Urease accessory protein ureG OS=Prochlorococcus m... [more]
UREG_PROMM9.919e-5265.47Urease accessory protein ureG OS=Prochlorococcus m... [more]
UREG_SYNS99.919e-5264.03Urease accessory protein ureG OS=Synechococcus sp.... [more]
UREG_ACIAD1.293e-5164.75Urease accessory protein ureG OS=Acinetobacter sp.... [more]
UREG_RHISN1.293e-5164.75Urease accessory protein ureG OS=Rhizobium sp. (st... [more]
UREG_HAHCH2.197e-5162.59Urease accessory protein ureG OS=Hahella chejuensi... [more]
UREG_RALME6.340e-5160.00Urease accessory protein ureG OS=Ralstonia metalli... [more]
UREG_VIBPA8.261e-5163.31Urease accessory protein ureG OS=Vibrio parahaemol... [more]
UREG_PSYIN8.266e-5163.31Urease accessory protein ureG OS=Psychromonas ingr... [more]
UREG_SYNSC8.268e-5166.19Urease accessory protein ureG OS=Synechococcus sp.... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004521_E09 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0001_IVF_E09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936512 ID=CK936512; Name=CK936512; organism=Citrus sinensis; type=EST; length=740bp
ACCCATGAAAAAAATCATGGTGATTCAACAGCAACATCATGGGTGGGGTC
AGATGGGAGGGTGTATCATAGCCATGATGGACTGGCGCCACACTCGCACG
AACCCATTTACTCTCCAGGCTATTTCAGCAGAAGAGCTCCGCCTATTCTC
AGCAGAAATTTCAATGAGAGAGCTTTTACCGTTGGCATTGGTGGCCCTGT
TGGTACTGGGAAAACAGCTTTAATGCTGGCTTTGTGTAAATTCTTGCGGG
ACAAGTACAGTCTTGCAGCTGTCACAAATGATATTTTCACAAAAGAAGAT
GGTGAATTCCTGATGCGGAATGGTGCTCTGCCTGAGGAGAGAATACGTGC
TGTGGAAACAGGTGGATGTCCTCATGCTGCAATTCGTGAAGACATCAGCA
TCAATCTGGGCCCTCTCGAGGAACTTTCTAACTTGTTCAAAGCAGACCTA
CTTCTTTGCGAATCTGGGGGAGATAATTTAGCTGCCAACTTCAGCAGGGA
ACTTGCAGACTATATCATTTATATAATAAACGTTTCTGGTGGTGATAAAA
TTCCTCGGAAAGGTGGCCCAGGCATCACCCAAGCTGACCTTCTGCAATAG
GAGCTGACTTAGCAGTAATGGAGCGTGATGCACTCCGGATGCGTGATGGA
GGGCCTTTTATCTTCGCTCAGGTCAAGCATGGGCTTGGTGTGGAGGAAAT
AGTGAATCACATTTTACAGGCTTGGGAAGCANNNNCAGGG
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