CK936512

Overview
NameCK936512
Unique NameCK936512
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length740
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_SYNPX (Urease accessory protein ureG OS=Synechococcus sp. (strain WH8102) GN=ureG PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 1.405e-50
Identity = 90/139 (64.75%), Postives = 108/139 (77.70%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLF-KADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            +G+ GPVG+GKTAL+ ALC  LRD+  LA VTNDI+T+ED +FL R GAL  ERIR VETGGCPH AIRED SIN   + +L   F   DL++ ESGGDNLAA+FS EL D  IY+I+V+ GDKIPRKGGPGIT++DLL
Sbjct:    7 LGVAGPVGSGKTALVEALCLRLRDQLQLAVVTNDIYTQEDAQFLTRAGALEPERIRGVETGGCPHTAIREDCSINRAAVADLEGQFPDLDLVMVESGGDNLAASFSPELVDLCIYVIDVAAGDKIPRKGGPGITRSDLL 145          

HSP 2 Score: 40.817 bits (94), Expect = 1.405e-50
Identity = 18/41 (43.90%), Postives = 28/41 (68.29%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHILQ 719
            +GADL+VME D  RMR   P+ F  +++G G+ ++V  +LQ
Sbjct:  156 VGADLSVMEADTRRMRGERPWCFTNLQNGDGLVQVVEFVLQ 196          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_RHOPT (Urease accessory protein ureG OS=Rhodopseudomonas palustris (strain TIE-1) GN=ureG PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 1.830e-50
Identity = 91/139 (65.47%), Postives = 112/139 (80.58%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFKA-DLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            VGIGGPVG+GKTALM  LCK +R++Y +AA+TNDI+TK D EFL+R+G+L  +RI  VETGGCPH AIRED S+NL  + E+ + F   DL+L ESGGDNLAA FS ELAD  IY+I+V+ GDKIP KGGPGIT++DLL
Sbjct:   10 VGIGGPVGSGKTALMDLLCKSMRERYDIAAITNDIYTKWDAEFLVRSGSLTPDRIAGVETGGCPHTAIREDASMNLAAVAEMRSKFPGLDLVLIESGGDNLAATFSPELADITIYVIDVAAGDKIPSKGGPGITRSDLL 148          

HSP 2 Score: 34.2686 bits (77), Expect = 1.830e-50
Identity = 15/39 (38.46%), Postives = 22/39 (56.41%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHI 713
            +GA L  M+ DA RMR   PF+   +K   G++ I+  I
Sbjct:  159 VGASLEKMDTDAKRMRGARPFVMTNLKKSEGLDRIIGFI 197          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_RHOPA (Urease accessory protein ureG OS=Rhodopseudomonas palustris GN=ureG PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 1.830e-50
Identity = 91/139 (65.47%), Postives = 112/139 (80.58%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFKA-DLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            VGIGGPVG+GKTALM  LCK +R++Y +AA+TNDI+TK D EFL+R+G+L  +RI  VETGGCPH AIRED S+NL  + E+ + F   DL+L ESGGDNLAA FS ELAD  IY+I+V+ GDKIP KGGPGIT++DLL
Sbjct:   10 VGIGGPVGSGKTALMDLLCKSMRERYDIAAITNDIYTKWDAEFLVRSGSLTPDRIAGVETGGCPHTAIREDASMNLAAVAEMRSKFPGLDLVLIESGGDNLAATFSPELADITIYVIDVAAGDKIPSKGGPGITRSDLL 148          

HSP 2 Score: 34.2686 bits (77), Expect = 1.830e-50
Identity = 15/39 (38.46%), Postives = 22/39 (56.41%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHI 713
            +GA L  M+ DA RMR   PF+   +K   G++ I+  I
Sbjct:  159 VGASLEKMDTDAKRMRGARPFVMTNLKKSEGLDRIIGFI 197          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_RHOPS (Urease accessory protein ureG OS=Rhodopseudomonas palustris (strain BisB5) GN=ureG PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 2.385e-50
Identity = 92/139 (66.19%), Postives = 112/139 (80.58%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFKA-DLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            VGIGGPVG+GKTALM  LCK +R++Y +AA+TNDI+TK D EFL+R+G+L  +RI  VETGGCPH AIRED S+NL  + E+ + F   DL+L ESGGDNLAA FS ELAD  IY+I+VS GDKIP KGGPGIT++DLL
Sbjct:   10 VGIGGPVGSGKTALMDLLCKSMRERYDIAAITNDIYTKWDAEFLVRSGSLTPDRIAGVETGGCPHTAIREDASMNLAAVAEMRSKFPGLDLVLIESGGDNLAATFSPELADLTIYVIDVSAGDKIPSKGGPGITRSDLL 148          

HSP 2 Score: 32.7278 bits (73), Expect = 2.385e-50
Identity = 16/39 (41.03%), Postives = 23/39 (58.97%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHI 713
            +GA L  M+ DA RMR   PF+   +K   G+E I++ I
Sbjct:  159 VGASLDKMDADARRMRGERPFVMTNLKTREGLERILSFI 197          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_SYNY3 (Urease accessory protein ureG OS=Synechocystis sp. (strain PCC 6803) GN=ureG PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 2.386e-50
Identity = 88/139 (63.31%), Postives = 107/139 (76.98%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLF-KADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            +GI GPVG+GKTAL+ ALCK LR KY LA VTNDI+T+ED +FL+R  AL  +RI  VETGGCPH AIRED S+NL  + +L   F   D++  ESGGDNLAA FS EL D  +Y+I+V+ GDKIPRKGGPGIT++DLL
Sbjct:    8 IGIAGPVGSGKTALLEALCKALRQKYQLAVVTNDIYTQEDAQFLVRAEALTPDRILGVETGGCPHTAIREDASLNLAAIADLEARFMPLDMVFLESGGDNLAATFSPELVDLTLYVIDVAAGDKIPRKGGPGITKSDLL 146          

HSP 2 Score: 40.817 bits (94), Expect = 2.386e-50
Identity = 16/39 (41.03%), Postives = 26/39 (66.67%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHI 713
            +GADL +M+RDA +MR   PF+F  +K   G+  +V+ +
Sbjct:  157 VGADLGIMDRDAKKMRGEKPFVFTNLKTATGLSTVVDFV 195          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_BURP8 (Urease accessory protein ureG OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=ureG PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 3.109e-50
Identity = 93/154 (60.39%), Postives = 112/154 (72.73%), Query Frame = 1
Query:  136 APPILSRNFNERAFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLF-KADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            AP  + R        VG+GGPVG+GKT L+  LCK +RDKY L A+TNDI+TKED   L   GALP ERI  VETGGCPH AIRED SINL  ++ +   F  AD++  ESGGDNLAA FS EL+D  IY+I+V+GG+KIPRKGGPGIT++DLL
Sbjct:    3 APHTMHRTKKLPPLRVGVGGPVGSGKTTLLEMLCKAMRDKYDLVAITNDIYTKEDQRLLTVAGALPAERIMGVETGGCPHTAIREDASINLEAVDRMLTRFPDADIVFIESGGDNLAATFSPELSDLTIYVIDVAGGEKIPRKGGPGITKSDLL 156          

HSP 2 Score: 34.2686 bits (77), Expect = 3.109e-50
Identity = 16/39 (41.03%), Postives = 24/39 (61.54%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHI 713
            +GA+L VM  DA RMR   PF    +K   G++E+++ I
Sbjct:  167 VGANLDVMASDAARMRGARPFAMCNLKALEGLDEVISFI 205          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_RHIE6 (Urease accessory protein ureG OS=Rhizobium etli (strain CIAT 652) GN=ureG PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 3.111e-50
Identity = 88/139 (63.31%), Postives = 106/139 (76.26%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLF-KADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            VGIGGPVG+GKTAL   LCK +RD YS+A VTNDI+T ED E L+R  ALP +RI  VETGGCPH AIRED +INL  +  L+  F   D++  ESGGDNLAA FS +LAD  IY+I+V  G++IPRKGGPGIT++DLL
Sbjct:   10 VGIGGPVGSGKTALTEKLCKAMRDDYSVAVVTNDIYTTEDAEALVRMQALPSDRIVGVETGGCPHTAIREDATINLQAIAGLNERFPDLDVVFIESGGDNLAATFSPDLADITIYVISVCQGEEIPRKGGPGITRSDLL 148          

HSP 2 Score: 46.2098 bits (108), Expect = 3.111e-50
Identity = 20/39 (51.28%), Postives = 28/39 (71.79%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHI 713
            +GADL VM+RDA RMR   PF+F+ +K G G+  IV+ +
Sbjct:  159 VGADLEVMDRDATRMRASRPFVFSDMKRGDGINSIVSFL 197          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_RHIEC (Urease accessory protein ureG OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=ureG PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 3.111e-50
Identity = 87/139 (62.59%), Postives = 106/139 (76.26%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELS-NLFKADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            VGIGGPVG+GKTAL   LCK +RD YS+A VTNDI+T ED E L+R  ALP +RI  VETGGCPH AIRED +INL  +  L+  +   D++  ESGGDNLAA FS +LAD  IY+I+V  G++IPRKGGPGIT++DLL
Sbjct:   10 VGIGGPVGSGKTALTEKLCKAMRDDYSVAVVTNDIYTTEDAEALVRMQALPSDRIVGVETGGCPHTAIREDATINLQAIAGLNERIPDLDVVFIESGGDNLAATFSPDLADITIYVISVCQGEEIPRKGGPGITRSDLL 148          

HSP 2 Score: 48.521 bits (114), Expect = 3.111e-50
Identity = 22/39 (56.41%), Postives = 28/39 (71.79%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHI 713
            +GADL VM+RDA RMR   PF+F+ +K G GV  IVN +
Sbjct:  159 VGADLEVMDRDATRMRASRPFVFSDMKRGDGVSSIVNFL 197          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_BRAJA (Urease accessory protein ureG OS=Bradyrhizobium japonicum GN=ureG PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 4.054e-50
Identity = 89/139 (64.03%), Postives = 111/139 (79.86%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFKA-DLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            VG+GGPVG+GKTALM  LCK +R++Y +AA+TNDI+TK D EFL+R+G+L  +RI  VETGGCPH AIRED S+NL  + ++   F   DL+L ESGGDNLAA FS ELAD  IY+I+V+ GDKIP KGGPGIT++DLL
Sbjct:   10 VGVGGPVGSGKTALMDLLCKTMRERYDIAAITNDIYTKWDAEFLVRSGSLTPDRIAGVETGGCPHTAIREDASMNLAAVADMRAKFPGLDLVLIESGGDNLAATFSPELADLTIYVIDVAAGDKIPSKGGPGITRSDLL 148          

HSP 2 Score: 35.8094 bits (81), Expect = 4.054e-50
Identity = 17/39 (43.59%), Postives = 22/39 (56.41%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHI 713
            +GA L  ME DA RMR   PF+   +K   G++ IV  I
Sbjct:  159 VGASLEKMETDARRMRGARPFVMTNLKKSEGLDRIVGFI 197          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_ALTMD (Urease accessory protein ureG OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=ureG PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 4.055e-50
Identity = 89/144 (61.81%), Postives = 111/144 (77.08%), Query Frame = 1
Query:  166 ERAFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFK-ADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            ++   +G+GGPVG+GKTAL+  LC  LRDKY++A VTNDI+T+ED EFL +N AL  +RI  VETGGCPH AIRED S+NL  ++EL       D +L ESGGDNL+A FS EL+D  IY+I+VS GDKIPRKGGPGIT++DLL
Sbjct:    3 KQVLRIGVGGPVGSGKTALLRQLCLSLRDKYNMAVVTNDIYTREDAEFLTKNDALAADRIIGVETGGCPHTAIREDASMNLAAIDELQARHNDLDFVLVESGGDNLSATFSPELSDLTIYVIDVSAGDKIPRKGGPGITKSDLL 146          

HSP 2 Score: 35.8094 bits (81), Expect = 4.055e-50
Identity = 16/39 (41.03%), Postives = 25/39 (64.10%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHI 713
            +GA L VM+ D  +MR   PFIF+ +K   G+ +I++ I
Sbjct:  157 VGASLEVMDADTKKMRGDKPFIFSNMKTQQGLADIISFI 195          
The following BLAST results are available for this feature:
BLAST of CK936512 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 253
Match NameE-valueIdentityDescription
UREG_SYNPX1.405e-5064.75Urease accessory protein ureG OS=Synechococcus sp.... [more]
UREG_RHOPT1.830e-5065.47Urease accessory protein ureG OS=Rhodopseudomonas ... [more]
UREG_RHOPA1.830e-5065.47Urease accessory protein ureG OS=Rhodopseudomonas ... [more]
UREG_RHOPS2.385e-5066.19Urease accessory protein ureG OS=Rhodopseudomonas ... [more]
UREG_SYNY32.386e-5063.31Urease accessory protein ureG OS=Synechocystis sp.... [more]
UREG_BURP83.109e-5060.39Urease accessory protein ureG OS=Burkholderia phym... [more]
UREG_RHIE63.111e-5063.31Urease accessory protein ureG OS=Rhizobium etli (s... [more]
UREG_RHIEC3.111e-5062.59Urease accessory protein ureG OS=Rhizobium etli (s... [more]
UREG_BRAJA4.054e-5064.03Urease accessory protein ureG OS=Bradyrhizobium ja... [more]
UREG_ALTMD4.055e-5061.81Urease accessory protein ureG OS=Alteromonas macle... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004521_E09 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0001_IVF_E09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936512 ID=CK936512; Name=CK936512; organism=Citrus sinensis; type=EST; length=740bp
ACCCATGAAAAAAATCATGGTGATTCAACAGCAACATCATGGGTGGGGTC
AGATGGGAGGGTGTATCATAGCCATGATGGACTGGCGCCACACTCGCACG
AACCCATTTACTCTCCAGGCTATTTCAGCAGAAGAGCTCCGCCTATTCTC
AGCAGAAATTTCAATGAGAGAGCTTTTACCGTTGGCATTGGTGGCCCTGT
TGGTACTGGGAAAACAGCTTTAATGCTGGCTTTGTGTAAATTCTTGCGGG
ACAAGTACAGTCTTGCAGCTGTCACAAATGATATTTTCACAAAAGAAGAT
GGTGAATTCCTGATGCGGAATGGTGCTCTGCCTGAGGAGAGAATACGTGC
TGTGGAAACAGGTGGATGTCCTCATGCTGCAATTCGTGAAGACATCAGCA
TCAATCTGGGCCCTCTCGAGGAACTTTCTAACTTGTTCAAAGCAGACCTA
CTTCTTTGCGAATCTGGGGGAGATAATTTAGCTGCCAACTTCAGCAGGGA
ACTTGCAGACTATATCATTTATATAATAAACGTTTCTGGTGGTGATAAAA
TTCCTCGGAAAGGTGGCCCAGGCATCACCCAAGCTGACCTTCTGCAATAG
GAGCTGACTTAGCAGTAATGGAGCGTGATGCACTCCGGATGCGTGATGGA
GGGCCTTTTATCTTCGCTCAGGTCAAGCATGGGCTTGGTGTGGAGGAAAT
AGTGAATCACATTTTACAGGCTTGGGAAGCANNNNCAGGG
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