CK936512

Overview
NameCK936512
Unique NameCK936512
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length740
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_NITMU (Urease accessory protein ureG OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=ureG PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 5.282e-50
Identity = 89/147 (60.54%), Postives = 111/147 (75.51%), Query Frame = 1
Query:  157 NFNERAFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLF-KADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            N       VGIGGPVG+GKTAL  AL K +RD+Y +A +TNDI+T+ED E L+R  ALP ER+  VETGGCPH AIRED SINL  +  ++  F + DL+L ESGGDNLA+ FS EL+D  IY+I+V+GG+K+PRKGGPGIT+A LL
Sbjct:    2 NKQSNPLRVGIGGPVGSGKTALCEALSKRMRDRYEMAVITNDIYTREDMEILLRADALPPERLMGVETGGCPHTAIREDASINLEAVARMTADFPELDLILIESGGDNLASTFSPELSDLTIYVIDVAGGEKVPRKGGPGITRAALL 148          

HSP 2 Score: 40.4318 bits (93), Expect = 5.282e-50
Identity = 16/41 (39.02%), Postives = 29/41 (70.73%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHILQ 719
            +GA+L +M RDA +MR   PF+F  +  G GV+++++ I++
Sbjct:  159 VGANLEIMARDARKMRGERPFVFTNLHTGEGVDQVIDFIVK 199          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_RHOP5 (Urease accessory protein ureG OS=Rhodopseudomonas palustris (strain BisA53) GN=ureG PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 5.283e-50
Identity = 91/139 (65.47%), Postives = 111/139 (79.86%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLF-KADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            VGIGGPVG+GKTALM  LCK LR++Y +AA+TNDI+TK D EFL+R+G+L  +RI  VETGGCPH AIRED S+NL  + ++   F   DL+L ESGGDNLAA FS ELAD  IY+I+V+ GDKIP KGGPGIT++DLL
Sbjct:   10 VGIGGPVGSGKTALMDLLCKELRERYQIAAITNDIYTKWDAEFLVRSGSLTPDRIVGVETGGCPHTAIREDASMNLAAVADMRAKFPDLDLVLIESGGDNLAATFSPELADLTIYVIDVAAGDKIPSKGGPGITRSDLL 148          

HSP 2 Score: 35.8094 bits (81), Expect = 5.283e-50
Identity = 16/36 (44.44%), Postives = 22/36 (61.11%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIV 704
            +GA LA ME DA RMR   PF+   +K   G++ I+
Sbjct:  159 VGASLAKMEVDAKRMRGERPFVMTNLKQSAGLDRII 194          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_VIBFM (Urease accessory protein ureG OS=Vibrio fischeri (strain MJ11) GN=ureG PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 5.284e-50
Identity = 86/139 (61.87%), Postives = 108/139 (77.70%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFK-ADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            +G+GGPVG+GKTAL+  LCK LRD Y +A VTNDI+T+ED + L +  AL  +RI  VETGGCPH AIRED S+NL  +EEL+   K  D++  ESGGDNL+A FS ELAD  IY+I+V+ G+KIPRKGGPGIT++DLL
Sbjct:   10 IGVGGPVGSGKTALLEVLCKTLRDTYQIAVVTNDIYTQEDAKILTQAEALAADRIIGVETGGCPHTAIREDASMNLAAVEELAQRHKNLDVVFVESGGDNLSATFSPELADLTIYVIDVAEGEKIPRKGGPGITKSDLL 148          

HSP 2 Score: 43.5134 bits (101), Expect = 5.284e-50
Identity = 18/40 (45.00%), Postives = 28/40 (70.00%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHIL 716
            +GA L VME D  RMR   P++FA +K G+G+++I+  I+
Sbjct:  159 VGASLEVMESDTARMRPTRPYVFANLKEGVGLDKIIEFIV 198          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_DECAR (Urease accessory protein ureG OS=Dechloromonas aromatica (strain RCB) GN=ureG PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 6.890e-50
Identity = 91/145 (62.76%), Postives = 114/145 (78.62%), Query Frame = 1
Query:  163 NERAFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFKA-DLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            +++A  VGIGGPVG+GKTAL LALC+ LR++  +A VTNDI+T ED +FL+ + AL  ERI  VETGGCPH AIRED SINL  ++ L   F A +L+L ESGGDNLAA FS EL+D  IY+I+V+ G+KIPRKGGPGIT++DLL
Sbjct:    2 SKQALRVGIGGPVGSGKTALTLALCQALREQIDMAVVTNDIYTAEDAKFLVNHSALAPERIIGVETGGCPHTAIREDASINLEAIDRLQRAFPAVELILVESGGDNLAATFSPELSDLTIYVIDVAAGEKIPRKGGPGITKSDLL 146          

HSP 2 Score: 35.039 bits (79), Expect = 6.890e-50
Identity = 17/39 (43.59%), Postives = 22/39 (56.41%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHI 713
            +GA L VM  DA   R   PF+F  +K G G+E I+  I
Sbjct:  157 VGASLEVMAHDAKVQRGERPFVFTNLKTGHGLETIIEFI 195          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_RHILW (Urease accessory protein ureG OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=ureG PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 8.979e-50
Identity = 87/139 (62.59%), Postives = 106/139 (76.26%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELS-NLFKADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            VGIGGPVG+GKTAL   LCK +RD YS+A VTNDI+T ED E L+R  ALP +RI  VETGGCPH AIRED +INL  +  L+  +   D++  ESGGDNLAA FS +LAD  IY+I+V  G++IPRKGGPGIT++DLL
Sbjct:   10 VGIGGPVGSGKTALTEKLCKAMRDNYSVAVVTNDIYTTEDAEALVRMQALPSDRIVGVETGGCPHTAIREDATINLQAIAGLNQRIPDLDVVFIESGGDNLAATFSPDLADITIYVISVCQGEEIPRKGGPGITRSDLL 148          

HSP 2 Score: 46.595 bits (109), Expect = 8.979e-50
Identity = 21/39 (53.85%), Postives = 28/39 (71.79%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHI 713
            +GADL VM+RDA RMR   PF+F+ +K G GV  IV+ +
Sbjct:  159 VGADLEVMDRDATRMRASRPFVFSDMKRGDGVSSIVSFL 197          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_RHOPB (Urease accessory protein ureG OS=Rhodopseudomonas palustris (strain BisB18) GN=ureG PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 1.170e-49
Identity = 92/139 (66.19%), Postives = 112/139 (80.58%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLF-KADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            VGIGGPVG+GKTALM  LCK LRD+Y +AA+TNDI+TK D EFL+R+G+L ++RI  VETGGCPH AIRED S+NL  + ++   F   DL+L ESGGDNLAA FS ELAD  IY+I+V+ GDKIP KGGPGIT++DLL
Sbjct:   10 VGIGGPVGSGKTALMDLLCKTLRDRYQIAAITNDIYTKWDAEFLVRSGSLTQDRIVGVETGGCPHTAIREDASMNLAAVADMRAKFPDLDLVLIESGGDNLAATFSPELADLTIYVIDVAAGDKIPSKGGPGITRSDLL 148          

HSP 2 Score: 31.5722 bits (70), Expect = 1.170e-49
Identity = 16/39 (41.03%), Postives = 22/39 (56.41%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHI 713
            +GA L  M+ DA RMR   PF+   +K   G++ IV  I
Sbjct:  159 VGASLDKMQIDAKRMRGERPFVMTNLKTQEGLDRIVGFI 197          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_SHEHH (Urease accessory protein ureG OS=Shewanella halifaxensis (strain HAW-EB4) GN=ureG PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.170e-49
Identity = 87/139 (62.59%), Postives = 109/139 (78.42%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFK-ADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            +G+GGPVG+GKTAL+  LCK LR+KY +A VTNDI+T+ED + L R  AL  +RI  VETGGCPH AIRED S+NL  +EEL+   K  D++  ESGGDNL+A FS ELAD  IY+I+V+ G+KIPRKGGPGIT++DLL
Sbjct:   12 IGVGGPVGSGKTALLEVLCKALRNKYQIAVVTNDIYTQEDAKILTRAEALDADRIIGVETGGCPHTAIREDASMNLAAVEELAKRHKNLDVVFVESGGDNLSATFSPELADLTIYVIDVAEGEKIPRKGGPGITRSDLL 150          

HSP 2 Score: 40.4318 bits (93), Expect = 1.170e-49
Identity = 19/39 (48.72%), Postives = 25/39 (64.10%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHI 713
            +GA L VM++D  RMR   P+IF  +K G GV EI+  I
Sbjct:  161 VGASLVVMDQDTKRMRPEKPYIFTNMKTGKGVPEILTFI 199          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_RHOP2 (Urease accessory protein ureG OS=Rhodopseudomonas palustris (strain HaA2) GN=ureG PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 1.525e-49
Identity = 92/139 (66.19%), Postives = 112/139 (80.58%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLF-KADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            VGIGGPVG+GKTALM  LCK +R++Y +AA+TNDI+TK D EFL+R+G+L  +RI  VETGGCPH AIRED S+NL  + E+ + F   DL+L ESGGDNLAA FS ELAD  IY+I+VS GDKIP KGGPGIT++DLL
Sbjct:   10 VGIGGPVGSGKTALMDLLCKSMRERYDIAAITNDIYTKWDAEFLVRSGSLTADRIAGVETGGCPHTAIREDASMNLAAVAEMRSKFPDLDLVLIESGGDNLAATFSPELADLTIYVIDVSAGDKIPSKGGPGITRSDLL 148          

HSP 2 Score: 30.4166 bits (67), Expect = 1.525e-49
Identity = 15/39 (38.46%), Postives = 22/39 (56.41%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHI 713
            +GA L  M+ DA RMR   PF+   +K   G++ I+  I
Sbjct:  159 VGASLEKMDVDARRMRGERPFVMTNLKKQEGLDRILAFI 197          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_VIBF1 (Urease accessory protein ureG OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=ureG PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 1.525e-49
Identity = 86/139 (61.87%), Postives = 108/139 (77.70%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFK-ADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            +G+GGPVG+GKTAL+  LCK LRD Y +A VTNDI+T+ED + L +  AL  +RI  VETGGCPH AIRED S+NL  +EEL+   K  D++  ESGGDNL+A FS ELAD  IY+I+V+ G+KIPRKGGPGIT++DLL
Sbjct:   10 IGVGGPVGSGKTALLEVLCKTLRDTYQIAVVTNDIYTQEDAKILTQAEALAADRIIGVETGGCPHTAIREDASMNLAAVEELAQRHKNLDVVFVESGGDNLSATFSPELADLTIYVIDVAEGEKIPRKGGPGITKSDLL 148          

HSP 2 Score: 41.9726 bits (97), Expect = 1.525e-49
Identity = 17/40 (42.50%), Postives = 27/40 (67.50%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHIL 716
            +GA L VME D  RMR   P++F  +K G+G+++I+  I+
Sbjct:  159 VGASLEVMESDTARMRPTRPYVFTNLKEGVGLDKIIEFIV 198          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_RALSO (Urease accessory protein ureG OS=Ralstonia solanacearum GN=ureG PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 1.988e-49
Identity = 89/142 (62.68%), Postives = 110/142 (77.46%), Query Frame = 1
Query:  172 AFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLF-KADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            A  VG+GGPVG+GKT L+  LCK +R++Y L A+TNDI+TKED   L  +GALP ERI  VETGGCPH AIRED SINL  ++ +   F  AD++  ESGGDNLAA FS EL+D  IY+I+V+GG+KIPRKGGPGIT++DLL
Sbjct:    8 ALRVGVGGPVGSGKTTLLEMLCKAMRERYDLVAITNDIYTKEDQRLLTLSGALPAERIMGVETGGCPHTAIREDASINLEAVDRMLARFPDADVVFIESGGDNLAATFSPELSDLTIYVIDVAGGEKIPRKGGPGITKSDLL 149          

HSP 2 Score: 34.2686 bits (77), Expect = 1.988e-49
Identity = 16/41 (39.02%), Postives = 23/41 (56.10%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHILQ 719
            +GA L VM  DA +MR   PF+   +K   G++ +V  I Q
Sbjct:  160 VGASLDVMASDARKMRGDRPFVMCNLKEQAGLDAVVRFIEQ 200          
The following BLAST results are available for this feature:
BLAST of CK936512 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 253
Match NameE-valueIdentityDescription
UREG_NITMU5.282e-5060.54Urease accessory protein ureG OS=Nitrosospira mult... [more]
UREG_RHOP55.283e-5065.47Urease accessory protein ureG OS=Rhodopseudomonas ... [more]
UREG_VIBFM5.284e-5061.87Urease accessory protein ureG OS=Vibrio fischeri (... [more]
UREG_DECAR6.890e-5062.76Urease accessory protein ureG OS=Dechloromonas aro... [more]
UREG_RHILW8.979e-5062.59Urease accessory protein ureG OS=Rhizobium legumin... [more]
UREG_RHOPB1.170e-4966.19Urease accessory protein ureG OS=Rhodopseudomonas ... [more]
UREG_SHEHH1.170e-4962.59Urease accessory protein ureG OS=Shewanella halifa... [more]
UREG_RHOP21.525e-4966.19Urease accessory protein ureG OS=Rhodopseudomonas ... [more]
UREG_VIBF11.525e-4961.87Urease accessory protein ureG OS=Vibrio fischeri (... [more]
UREG_RALSO1.988e-4962.68Urease accessory protein ureG OS=Ralstonia solanac... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004521_E09 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0001_IVF_E09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936512 ID=CK936512; Name=CK936512; organism=Citrus sinensis; type=EST; length=740bp
ACCCATGAAAAAAATCATGGTGATTCAACAGCAACATCATGGGTGGGGTC
AGATGGGAGGGTGTATCATAGCCATGATGGACTGGCGCCACACTCGCACG
AACCCATTTACTCTCCAGGCTATTTCAGCAGAAGAGCTCCGCCTATTCTC
AGCAGAAATTTCAATGAGAGAGCTTTTACCGTTGGCATTGGTGGCCCTGT
TGGTACTGGGAAAACAGCTTTAATGCTGGCTTTGTGTAAATTCTTGCGGG
ACAAGTACAGTCTTGCAGCTGTCACAAATGATATTTTCACAAAAGAAGAT
GGTGAATTCCTGATGCGGAATGGTGCTCTGCCTGAGGAGAGAATACGTGC
TGTGGAAACAGGTGGATGTCCTCATGCTGCAATTCGTGAAGACATCAGCA
TCAATCTGGGCCCTCTCGAGGAACTTTCTAACTTGTTCAAAGCAGACCTA
CTTCTTTGCGAATCTGGGGGAGATAATTTAGCTGCCAACTTCAGCAGGGA
ACTTGCAGACTATATCATTTATATAATAAACGTTTCTGGTGGTGATAAAA
TTCCTCGGAAAGGTGGCCCAGGCATCACCCAAGCTGACCTTCTGCAATAG
GAGCTGACTTAGCAGTAATGGAGCGTGATGCACTCCGGATGCGTGATGGA
GGGCCTTTTATCTTCGCTCAGGTCAAGCATGGGCTTGGTGTGGAGGAAAT
AGTGAATCACATTTTACAGGCTTGGGAAGCANNNNCAGGG
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