CX675142

Overview
NameCX675142
Unique NameCX675142
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length775
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX675142 vs. ExPASy Swiss-Prot
Match: GLYG5_SOYBN (Glycinin OS=Glycine max PE=1 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.787e-37
Identity = 79/167 (47.31%), Postives = 113/167 (67.66%), Query Frame = 1 
Query:   61 NGIEETICTMKLKHNINDPSGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFKTNDVAKTSQLAGRASVIRGLPLDVIQNSFQVSRDEAQRLKY 561
            NG+EE ICTMKL  NI  PS AD YNP+ GR++T+N   LP LR   LSA+   LY+N + +P WNLNA+SV  +TRG GR+++V   G  VFDG++R GQL+VVPQ  AV ++   +GLE++ FKT+  A +S +     V R +P +V+ NS+ + + + ++LKY
Sbjct:  344 NGVEENICTMKLHENIARPSRADFYNPKAGRISTLNSLTLPALRQFGLSAQYVVLYRNGIYSPDWNLNANSVT-MTRGKGRVRVVNCQGNAVFDGELRRGQLLVVPQNPAVAEQGGEQGLEYVVFKTHHNAVSSYI---KDVFRVIPSEVLSNSYNLGQSQVRQLKY 506
[Close]
BLAST of CX675142 vs. ExPASy Swiss-Prot
Match: LEG_CICAR (Legumin OS=Cicer arietinum GN=leg3 PE=1 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.134e-30
Identity = 61/133 (45.86%), Postives = 90/133 (67.67%), Query Frame = 1 
Query:   58 DNGIEETICTMKLKHNINDPSGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAE-NGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFKTNDVA 453
            DNG EETICT +L  NI   S  D YNP+ GR+ TV  F+L  LR+++LSAE G+L++NAM  PH+NLNA+S++Y  +G  R+       G +VFDG++  G+ ++VPQ FA+  ++ +    +++FKTND A
Sbjct:  310 DNGFEETICTARLHQNIGSSSSPDIYNPQAGRIKTVTSFDLQALRFLKLSAEFGSLHKNAMFVPHYNLNANSILYALKGRARLLYALNCKGNSVFDGELEAGRALIVPQNFAIAAKSLSDRFSYVAFKTNDRA 442
The following BLAST results are available for this feature:
BLAST of CX675142 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
GLYG5_SOYBN2.787e-3747.31Glycinin OS=Glycine max PE=1 SV=1[more]
LEG_CICAR1.134e-3045.86Legumin OS=Cicer arietinum GN=leg3 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_60B03_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-60B03-C6-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675142 ID=CX675142; Name=CX675142; organism=Citrus sinensis; type=EST; length=775bp
CTGTCACCTCAAAGAGGCAGAGAACAAGAACAAGAACAAGAATTCCAAGG
AAGCGGAGACAACGGCATCGAGGAAACTATCTGTACAATGAAGCTAAAGC
ACAACATCAATGACCCATCGGGTGCTGACGCGTACAACCCCCGCGGCGGA
CGCGTCACCACCGTCAACAGATTCAACCTTCCTATCCTTCGATACATTCA
GCTTAGTGCTGAGAAAGGGAACCTCTACCAGAATGCCATGATGGCGCCAC
ACTGGAACTTGAATGCCCACAGCGTAGTCTACATAACAAGGGGCAACGGC
AGGATGCAAATTGTGGCGGAGAACGGGGAGAATGTGTTCGACGGTCAAAT
CCGGGAGGGTCAGCTGATCGTTGTCCCGCAGGGCTTCGCCGTGGTGAAGA
GGGCAAGCAACCGTGGATTGGAGTGGATATCATTCAAGACAAACGACGTC
GCCAAGACAAGCCAGCTGGCCGGAAGGGCTTCGGTGATTAGAGGGCTGCC
GTTGGACGTTATCCAGAACTCGTTCCAAGTGTCGAGGGATGAAGCTCAGA
GGTTGAAGTACAACAGGCAGGAGCTGACTGTCTTTACTCCAGGGCCTAGG
TCACAGTAATTAGTTAGTGCGTGATCAAAGTAATGAACTTATATTAAGGG
TTTATATATGTGTATGTACATAAGGAATAAAGTCCTTGCTGTTGGCTCGA
AAGTGTACTGCTGCTGTAAGTTTTGTTCTGGTGAAATAAGAAAACTAAAT
GTTTTTGCCGTAAAAAAAAAAAAAA
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