CK936495
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK936495 vs. ExPASy Swiss-Prot
Match: ACTB_CAVPO (Actin, cytoplasmic 1 OS=Cavia porcellus GN=ACTB PE=2 SV=1) HSP 1 Score: 373.629 bits (958), Expect = 3.835e-105 Identity = 182/191 (95.29%), Postives = 187/191 (97.91%), Query Frame = 1 Query: 181 AGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLFLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDM 753 AGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVL LYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRD+ Sbjct: 22 AGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 212 HSP 2 Score: 28.1054 bits (61), Expect = 3.835e-105 Identity = 12/18 (66.67%), Postives = 14/18 (77.78%), Query Frame = 2 Query: 125 EDIQPLVCDNGTGMVKAG 178 +DI LV DNG+GM KAG Sbjct: 3 DDIAALVVDNGSGMCKAG 20
BLAST of CK936495 vs. ExPASy Swiss-Prot
Match: ACTB_CANFA (Actin, cytoplasmic 1 OS=Canis familiaris GN=ACTB PE=2 SV=3) HSP 1 Score: 373.629 bits (958), Expect = 3.835e-105 Identity = 182/191 (95.29%), Postives = 187/191 (97.91%), Query Frame = 1 Query: 181 AGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLFLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDM 753 AGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVL LYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRD+ Sbjct: 22 AGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 212 HSP 2 Score: 28.1054 bits (61), Expect = 3.835e-105 Identity = 12/18 (66.67%), Postives = 14/18 (77.78%), Query Frame = 2 Query: 125 EDIQPLVCDNGTGMVKAG 178 +DI LV DNG+GM KAG Sbjct: 3 DDIAALVVDNGSGMCKAG 20
BLAST of CK936495 vs. ExPASy Swiss-Prot
Match: ACTB_BOVIN (Actin, cytoplasmic 1 OS=Bos taurus GN=ACTB PE=1 SV=1) HSP 1 Score: 373.629 bits (958), Expect = 3.835e-105 Identity = 182/191 (95.29%), Postives = 187/191 (97.91%), Query Frame = 1 Query: 181 AGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLFLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDM 753 AGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVL LYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRD+ Sbjct: 22 AGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 212 HSP 2 Score: 28.1054 bits (61), Expect = 3.835e-105 Identity = 12/18 (66.67%), Postives = 14/18 (77.78%), Query Frame = 2 Query: 125 EDIQPLVCDNGTGMVKAG 178 +DI LV DNG+GM KAG Sbjct: 3 DDIAALVVDNGSGMCKAG 20
BLAST of CK936495 vs. ExPASy Swiss-Prot
Match: ACTC_HELTI (Actin, cytoplasmic OS=Helisoma trivolvis PE=3 SV=1) HSP 1 Score: 372.859 bits (956), Expect = 3.835e-105 Identity = 181/191 (94.76%), Postives = 187/191 (97.91%), Query Frame = 1 Query: 181 AGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLFLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDM 753 AGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVL LYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLDLAGRDLTD LMKILTERGYSFTTTAEREIVRD+ Sbjct: 23 AGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVIDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 213 HSP 2 Score: 28.8758 bits (63), Expect = 3.835e-105 Identity = 12/18 (66.67%), Postives = 14/18 (77.78%), Query Frame = 2 Query: 125 EDIQPLVCDNGTGMVKAG 178 ED+ LV DNG+GM KAG Sbjct: 4 EDVAALVVDNGSGMCKAG 21
BLAST of CK936495 vs. ExPASy Swiss-Prot
Match: ACTC_BIOGL (Actin, cytoplasmic OS=Biomphalaria glabrata PE=2 SV=2) HSP 1 Score: 372.859 bits (956), Expect = 3.835e-105 Identity = 181/191 (94.76%), Postives = 187/191 (97.91%), Query Frame = 1 Query: 181 AGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLFLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDM 753 AGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVL LYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLDLAGRDLTD LMKILTERGYSFTTTAEREIVRD+ Sbjct: 23 AGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 213 HSP 2 Score: 28.8758 bits (63), Expect = 3.835e-105 Identity = 12/18 (66.67%), Postives = 14/18 (77.78%), Query Frame = 2 Query: 125 EDIQPLVCDNGTGMVKAG 178 ED+ LV DNG+GM KAG Sbjct: 4 EDVAALVVDNGSGMCKAG 21
BLAST of CK936495 vs. ExPASy Swiss-Prot
Match: ACTC_BIOAL (Actin, cytoplasmic OS=Biomphalaria alexandrina PE=3 SV=1) HSP 1 Score: 372.859 bits (956), Expect = 3.835e-105 Identity = 181/191 (94.76%), Postives = 187/191 (97.91%), Query Frame = 1 Query: 181 AGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLFLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDM 753 AGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVL LYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLDLAGRDLTD LMKILTERGYSFTTTAEREIVRD+ Sbjct: 23 AGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 213 HSP 2 Score: 28.8758 bits (63), Expect = 3.835e-105 Identity = 12/18 (66.67%), Postives = 14/18 (77.78%), Query Frame = 2 Query: 125 EDIQPLVCDNGTGMVKAG 178 ED+ LV DNG+GM KAG Sbjct: 4 EDVAALVVDNGSGMCKAG 21
BLAST of CK936495 vs. ExPASy Swiss-Prot
Match: ACT2_MOLOC (Actin, muscle-type OS=Molgula oculata PE=3 SV=1) HSP 1 Score: 370.933 bits (951), Expect = 5.003e-105 Identity = 184/201 (91.54%), Postives = 189/201 (94.03%), Query Frame = 1 Query: 163 NG*GWV----AGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLFLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDM 753 NG G V AGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVL LYASGRTTGIVLDSGDGVSH VPIYEGYALPHAI+RLDLAGRDLTD LMKILTERGYSF TTAEREIVRD+ Sbjct: 15 NGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDI 215 HSP 2 Score: 30.4166 bits (67), Expect = 5.003e-105 Identity = 15/23 (65.22%), Postives = 18/23 (78.26%), Query Frame = 2 Query: 113 MADGEDIQP-LVCDNGTGMVKAG 178 M D E+ Q LVCDNG+G+VKAG Sbjct: 1 MEDEEEEQTALVCDNGSGLVKAG 23
BLAST of CK936495 vs. ExPASy Swiss-Prot
Match: ACTC_TAKRU (Actin, alpha cardiac OS=Takifugu rubripes PE=2 SV=1) HSP 1 Score: 368.237 bits (944), Expect = 5.003e-105 Identity = 182/201 (90.55%), Postives = 188/201 (93.53%), Query Frame = 1 Query: 163 NG*GWV----AGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLFLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDM 753 NG G V AGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVL LYASGRTTGIVLDSGDGV+H VPIYEGYALPHAI+RLDLAGRDLTD LMKILTERGYSF TTAEREIVRD+ Sbjct: 14 NGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDI 214 HSP 2 Score: 33.113 bits (74), Expect = 5.003e-105 Identity = 13/22 (59.09%), Postives = 17/22 (77.27%), Query Frame = 2 Query: 113 MADGEDIQPLVCDNGTGMVKAG 178 M D ++ LVCDNG+G+VKAG Sbjct: 1 MCDDDETTALVCDNGSGLVKAG 22
BLAST of CK936495 vs. ExPASy Swiss-Prot
Match: ACT2_XENLA (Actin, alpha sarcomeric/cardiac OS=Xenopus laevis PE=2 SV=1) HSP 1 Score: 368.237 bits (944), Expect = 5.003e-105 Identity = 182/201 (90.55%), Postives = 188/201 (93.53%), Query Frame = 1 Query: 163 NG*GWV----AGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLFLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDM 753 NG G V AGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVL LYASGRTTGIVLDSGDGV+H VPIYEGYALPHAI+RLDLAGRDLTD LMKILTERGYSF TTAEREIVRD+ Sbjct: 14 NGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDI 214 HSP 2 Score: 33.113 bits (74), Expect = 5.003e-105 Identity = 13/22 (59.09%), Postives = 17/22 (77.27%), Query Frame = 2 Query: 113 MADGEDIQPLVCDNGTGMVKAG 178 M D ++ LVCDNG+G+VKAG Sbjct: 1 MCDDDETTALVCDNGSGLVKAG 22
BLAST of CK936495 vs. ExPASy Swiss-Prot
Match: ACT3_BACDO (Actin-3, muscle-specific OS=Bactrocera dorsalis PE=2 SV=1) HSP 1 Score: 375.17 bits (962), Expect = 5.003e-105 Identity = 183/191 (95.81%), Postives = 187/191 (97.91%), Query Frame = 1 Query: 181 AGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLFLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDM 753 AGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVL LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRD+ Sbjct: 23 AGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 213 HSP 2 Score: 26.1794 bits (56), Expect = 5.003e-105 Identity = 10/18 (55.56%), Postives = 14/18 (77.78%), Query Frame = 2 Query: 125 EDIQPLVCDNGTGMVKAG 178 +++ LV DNG+GM KAG Sbjct: 4 DEVAALVVDNGSGMCKAG 21 The following BLAST results are available for this feature:
BLAST of CK936495 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 458
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Sequences
The
following sequences are available for this feature:
EST sequence >CK936495 ID=CK936495; Name=CK936495; organism=Citrus sinensis; type=EST; length=754bpback to top |