CK936495
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK936495 vs. ExPASy Swiss-Prot
Match: ACTS_ORYLA (Actin, alpha skeletal muscle OS=Oryzias latipes GN=acta1 PE=2 SV=1) HSP 1 Score: 366.696 bits (940), Expect = 6.528e-105 Identity = 180/201 (89.55%), Postives = 188/201 (93.53%), Query Frame = 1 Query: 163 NG*GWV----AGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLFLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDM 753 NG G V AGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVL LYASGRTTGIVLD+GDGV+H VP+YEGYALPHAI+RLDLAGRDLTD LMKILTERGYSF TTAEREIVRD+ Sbjct: 14 NGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDAGDGVTHNVPVYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDI 214 HSP 2 Score: 34.2686 bits (77), Expect = 6.528e-105 Identity = 14/22 (63.64%), Postives = 17/22 (77.27%), Query Frame = 2 Query: 113 MADGEDIQPLVCDNGTGMVKAG 178 M D E+ LVCDNG+G+VKAG Sbjct: 1 MCDDEETTALVCDNGSGLVKAG 22
BLAST of CK936495 vs. ExPASy Swiss-Prot
Match: ACTC_XENLA (Actin, alpha cardiac muscle 1 OS=Xenopus laevis GN=actc1 PE=2 SV=1) HSP 1 Score: 366.696 bits (940), Expect = 6.528e-105 Identity = 182/201 (90.55%), Postives = 187/201 (93.03%), Query Frame = 1 Query: 163 NG*GWV----AGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLFLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDM 753 NG G V AGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVL LYASGRTTGIVLDSGDGV+H VPIYEGYALPHAI RLDLAGRDLTD LMKILTERGYSF TTAEREIVRD+ Sbjct: 14 NGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIQRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDI 214 HSP 2 Score: 34.2686 bits (77), Expect = 6.528e-105 Identity = 14/22 (63.64%), Postives = 17/22 (77.27%), Query Frame = 2 Query: 113 MADGEDIQPLVCDNGTGMVKAG 178 M D E+ LVCDNG+G+VKAG Sbjct: 1 MCDDEETTALVCDNGSGLVKAG 22
BLAST of CK936495 vs. ExPASy Swiss-Prot
Match: ACT1_ARTSX (Actin, clone 205 OS=Artemia sp. PE=2 SV=1) HSP 1 Score: 374.785 bits (961), Expect = 6.528e-105 Identity = 181/191 (94.76%), Postives = 188/191 (98.43%), Query Frame = 1 Query: 181 AGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLFLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDM 753 AGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVL LYASGRTTG+VLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRD+ Sbjct: 23 AGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGVVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 213 HSP 2 Score: 26.1794 bits (56), Expect = 6.528e-105 Identity = 10/18 (55.56%), Postives = 14/18 (77.78%), Query Frame = 2 Query: 125 EDIQPLVCDNGTGMVKAG 178 +++ LV DNG+GM KAG Sbjct: 4 DEVAALVVDNGSGMCKAG 21
BLAST of CK936495 vs. ExPASy Swiss-Prot
Match: ACT1_AEDAE (Actin-1 OS=Aedes aegypti GN=ACT-1 PE=2 SV=2) HSP 1 Score: 373.629 bits (958), Expect = 6.528e-105 Identity = 182/191 (95.29%), Postives = 187/191 (97.91%), Query Frame = 1 Query: 181 AGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLFLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDM 753 AGDDAPRAVFPSIVGRPRH GVMVGMG KD+YVGDEAQSKRGILTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVL LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRD+ Sbjct: 23 AGDDAPRAVFPSIVGRPRHQGVMVGMGNKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 213 HSP 2 Score: 27.335 bits (59), Expect = 6.528e-105 Identity = 12/18 (66.67%), Postives = 13/18 (72.22%), Query Frame = 2 Query: 125 EDIQPLVCDNGTGMVKAG 178 ED LV DNG+GM KAG Sbjct: 4 EDAAALVVDNGSGMCKAG 21
BLAST of CK936495 vs. ExPASy Swiss-Prot
Match: ACT_TAESO (Actin OS=Taenia solium GN=ACT1 PE=3 SV=1) HSP 1 Score: 371.318 bits (952), Expect = 6.528e-105 Identity = 181/191 (94.76%), Postives = 186/191 (97.38%), Query Frame = 1 Query: 181 AGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLFLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDM 753 AGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYV IQAVL LYASGRTTGIVLDSGDGV+H+VPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRD+ Sbjct: 23 AGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVGIQAVLSLYASGRTTGIVLDSGDGVTHSVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 213 HSP 2 Score: 29.6462 bits (65), Expect = 6.528e-105 Identity = 12/18 (66.67%), Postives = 15/18 (83.33%), Query Frame = 2 Query: 125 EDIQPLVCDNGTGMVKAG 178 E++Q LV DNG+GM KAG Sbjct: 4 EEVQALVVDNGSGMCKAG 21
BLAST of CK936495 vs. ExPASy Swiss-Prot
Match: ACT1_DIPDE (Actin-1/4 OS=Diphyllobothrium dendriticum GN=ACT1 PE=2 SV=1) HSP 1 Score: 371.318 bits (952), Expect = 6.528e-105 Identity = 181/191 (94.76%), Postives = 186/191 (97.38%), Query Frame = 1 Query: 181 AGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLFLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDM 753 AGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYV IQAVL LYASGRTTGIVLDSGDGV+H+VPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRD+ Sbjct: 23 AGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVGIQAVLSLYASGRTTGIVLDSGDGVTHSVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 213 HSP 2 Score: 29.6462 bits (65), Expect = 6.528e-105 Identity = 12/18 (66.67%), Postives = 15/18 (83.33%), Query Frame = 2 Query: 125 EDIQPLVCDNGTGMVKAG 178 E++Q LV DNG+GM KAG Sbjct: 4 EEVQALVVDNGSGMCKAG 21
BLAST of CK936495 vs. ExPASy Swiss-Prot
Match: ACT2_SOLLC (Actin-51 (Fragment) OS=Solanum lycopersicum PE=3 SV=1) HSP 1 Score: 380.178 bits (975), Expect = 6.693e-105 Identity = 187/191 (97.91%), Postives = 187/191 (97.91%), Query Frame = 1 Query: 181 AGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLFLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDM 753 AGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAY GDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVL LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKILTERGY FTTTAEREIVRDM Sbjct: 4 AGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYDGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKILTERGYMFTTTAEREIVRDM 194
BLAST of CK936495 vs. ExPASy Swiss-Prot
Match: ACT2_BOMMO (Actin, muscle-type A2 OS=Bombyx mori PE=3 SV=1) HSP 1 Score: 374.785 bits (961), Expect = 8.517e-105 Identity = 182/191 (95.29%), Postives = 187/191 (97.91%), Query Frame = 1 Query: 181 AGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLFLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDM 753 AGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVL LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRD+ Sbjct: 23 AGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNCPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 213 HSP 2 Score: 25.7942 bits (55), Expect = 8.517e-105 Identity = 11/18 (61.11%), Postives = 13/18 (72.22%), Query Frame = 2 Query: 125 EDIQPLVCDNGTGMVKAG 178 +D LV DNG+GM KAG Sbjct: 4 DDAGALVVDNGSGMCKAG 21
BLAST of CK936495 vs. ExPASy Swiss-Prot
Match: ACTS_ATRMM (Actin, alpha skeletal muscle OS=Atractaspis microlepidota microlepidota GN=ACTA1 PE=2 SV=1) HSP 1 Score: 367.466 bits (942), Expect = 1.111e-104 Identity = 182/201 (90.55%), Postives = 188/201 (93.53%), Query Frame = 1 Query: 163 NG*GWV----AGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLFLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDM 753 NG G V AGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVL LYASGRTTGIVLDSGDGV+H VPIYEGYALPHAI+RLDLAGRDLTD LMKILTERGYSF TTAEREIVRD+ Sbjct: 14 NGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLPLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDI 214 HSP 2 Score: 32.7278 bits (73), Expect = 1.111e-104 Identity = 13/22 (59.09%), Postives = 17/22 (77.27%), Query Frame = 2 Query: 113 MADGEDIQPLVCDNGTGMVKAG 178 M D ++ LVCDNG+G+VKAG Sbjct: 1 MCDEDETTALVCDNGSGLVKAG 22
BLAST of CK936495 vs. ExPASy Swiss-Prot
Match: ACT5_BACDO (Actin-5, muscle-specific OS=Bactrocera dorsalis PE=2 SV=1) HSP 1 Score: 375.17 bits (962), Expect = 1.111e-104 Identity = 182/191 (95.29%), Postives = 188/191 (98.43%), Query Frame = 1 Query: 181 AGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLFLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDM 753 AGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI++NWDDMEK+WHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVL LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRD+ Sbjct: 23 AGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKVWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 213 HSP 2 Score: 25.0238 bits (53), Expect = 1.111e-104 Identity = 10/18 (55.56%), Postives = 13/18 (72.22%), Query Frame = 2 Query: 125 EDIQPLVCDNGTGMVKAG 178 ++ LV DNG+GM KAG Sbjct: 4 DEASALVVDNGSGMCKAG 21 The following BLAST results are available for this feature:
BLAST of CK936495 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 458
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Sequences
The
following sequences are available for this feature:
EST sequence >CK936495 ID=CK936495; Name=CK936495; organism=Citrus sinensis; type=EST; length=754bpback to top |