CK936495
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK936495 vs. ExPASy Swiss-Prot
Match: ACL6A_MOUSE (Actin-like protein 6A OS=Mus musculus GN=Actl6a PE=1 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 1.993e-24 Identity = 65/204 (31.86%), Postives = 110/204 (53.92%), Query Frame = 1 Query: 181 AGDDAPRAVFPSIVG----RPRHTGVMVGMGQKDAYVG-------DEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLFLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKILTERGYSFT---TTAEREIVRD 750 AG+D P+ FP+ +G R + +M G K G + + R + P+++G+V +WD + I HT+ ++ HPVL++EAP N +A REK+T++MFE ++ PA ++ AVL +A+GR+TG++LDSG + +P+++GY L I++ LAG +T ++ E A +E VR+ Sbjct: 28 AGEDCPKVDFPTAIGVVLERDDGSTMMEIDGDKGKQGGPTYYIDTNALRVPRENMEAISPLKNGMVEDWDSFQAILDHTYKMHVKSEASLHPVLMSEAPWNTRAKREKLTELMFEHYSIPAFFLCKTAVLTAFANGRSTGLILDSGATHTTAIPVHDGYVLQQGIVKSPLAGDFITMQCRELFQEMNIELIPPYMIASKEAVRE 231
BLAST of CK936495 vs. ExPASy Swiss-Prot
Match: ACTL8_HUMAN (Actin-like protein 8 OS=Homo sapiens GN=ACTL8 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 9.258e-22 Identity = 63/180 (35.00%), Postives = 96/180 (53.33%), Query Frame = 1 Query: 181 AGDDAPRAVFPSIVGR--------PRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLFLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKIL 696 AG + P+ VFP+IV P + V +G + T YPIE G + NW+ ++ +W N R E PV++TE PL A+R+KM +I+FE + P++ +A Q + LYASG TG+V+DSG G++ P ++G LP + L+ AG+DL+ L+K L Sbjct: 20 AGWNEPQMVFPNIVNYLPCKENPGPSYARRRVSLGIDICHPD----------TFSYPIERGRILNWEGVQYLWSFVLENHRR-EQEVPPVIITETPLREPADRKKMLEILFELLHVPSVLLADQLQMSLYASGLLTGVVVDSGYGLTRVQPFHQGRPLPASGKTLEFAGQDLSAYLLKSL 188
BLAST of CK936495 vs. ExPASy Swiss-Prot
Match: ACT1_PSEMZ (Actin-1 (Fragment) OS=Pseudotsuga menziesii PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.209e-21 Identity = 45/45 (100.00%), Postives = 45/45 (100.00%), Query Frame = 1 Query: 322 YPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK 456 YPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK Sbjct: 1 YPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK 45
BLAST of CK936495 vs. ExPASy Swiss-Prot
Match: CT134_MOUSE (Putative uncharacterized actin family protein C20orf134 homolog OS=Mus musculus PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.024e-20 Identity = 45/118 (38.14%), Postives = 75/118 (63.56%), Query Frame = 1 Query: 322 YPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLFLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 675 +PI+HG+V +WD +E +W L+V PE+ PVL++++P P REK+ +++FE PA ++A A+L L + G +G+ +++G GV H PIY G++ A RL++AG L+ Sbjct: 37 HPIKHGVVVDWDALEGLWERLMVGGLQVHPEQWPVLVSDSPSAPPKGREKVAELLFEALTVPACHMANTALLALCSIGAFSGLAVEAGAGVCHATPIYAGHSWHKATFRLNVAGSTLS 154
BLAST of CK936495 vs. ExPASy Swiss-Prot
Match: ARP5_SCHPO (Actin-like protein arp5 OS=Schizosaccharomyces pombe GN=arp5 PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 8.272e-19 Identity = 55/185 (29.73%), Postives = 97/185 (52.43%), Query Frame = 1 Query: 172 GWVAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTL-KYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLFLYASGR--TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKILTERGYSF 717 GW G+ P+ VF ++V R R + + VG++ + G ++ + P E ++SNWD ME++ +TF +L + EHP+ +TE NP R MT+++FE +NAP++ I + Y + + ++GIVL+ G+ SH +P+ G + R+ G + L+K+ + SF Sbjct: 39 GW-GGEKDPKLVFDNLVSRYRDRK----LSRTSTLVGNDTLIEVGSRSIARSPFERNVISNWDLMEQVLDYTFL-KLGIDRMEHPICMTEPLANPTYVRSTMTELLFELYNAPSVAYGIDGLFSFYHNTKPSSSGIVLNLGNAASHVIPVLNGERILSEAKRISWGGSQSSSYLLKLFQIKYPSF 217 HSP 2 Score: 21.557 bits (44), Expect = 8.272e-19 Identity = 8/14 (57.14%), Postives = 11/14 (78.57%), Query Frame = 2 Query: 137 PLVCDNGTGMVKAG 178 PLV DNG+ ++AG Sbjct: 26 PLVIDNGSWQLRAG 39
BLAST of CK936495 vs. ExPASy Swiss-Prot
Match: ARP4_SCHPO (Actin-related protein 4 OS=Schizosaccharomyces pombe GN=arp4 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 6.210e-18 Identity = 58/186 (31.18%), Postives = 89/186 (47.85%), Query Frame = 1 Query: 154 WNRNG*GWVAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLFLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKILTERGY 711 W R G +G+D P+ V PS G + G + Y+ +S G + +K I +G V NWD +W + +L+ P EHP+L+TE NP NR K + MFE+ PA Y+A Q +ASG+ T ++D G S IY+G+ L +G + D L + L ++ + Sbjct: 22 WTRIG---FSGEDIPKCVLPSYCGEFSDGRRLFG----EEYI---YKSNPG-MEIKNAIRNGWVENWDVTVDLWRYGLEQQLKTNPLEHPILITEPFDNPPENRVKTLETMFESLRCPATYLAKQETCAAFASGKGTACLVDIGAERSSVSAIYDGFVLQKGYQVQHFSGNAINDILAQTLRDKNF 196
BLAST of CK936495 vs. ExPASy Swiss-Prot
Match: ARP4_YARLI (Actin-related protein 4 OS=Yarrowia lipolytica GN=ARP4 PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.059e-17 Identity = 50/152 (32.89%), Postives = 77/152 (50.66%), Query Frame = 1 Query: 277 VGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLFLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKILTERGYSFTTTAE 732 VGD A + + +P+ GIV++WD ++ IW ++ L + HP++LTE N +AN+ K +I FE+ PA Y+ AV +A+G+ +VLD G V+ P+ +G L R AG L + K+L RG T E Sbjct: 72 VGDSANLPLPNMEVLHPLTDGIVADWDAVQNIWEYSLAR-LNADTKTHPLMLTEPCWNTQANKLKALEIAFESLEVPASYLVKDAVASAFAAGKGNALVLDVGSEVASVTPVIDGLVLYKPARRSQYAGDYLDRQIKKVLVSRGIDLTPRFE 222
BLAST of CK936495 vs. ExPASy Swiss-Prot
Match: ARP42_SCHPO (SWI/SNF and RSC complexes subunit arp42 OS=Schizosaccharomyces pombe GN=arp42 PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.360e-17 Identity = 51/190 (26.84%), Postives = 94/190 (49.47%), Query Frame = 1 Query: 154 WNRNG*GWVAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGI--LTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLFLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKILTERGYSF 717 W R G AG+++P + PS + GV + ++ YV DE Q I + +K +GI+ +W+ W +L+V P E+ +++TE NP++ R+++ + FE + PA Y+ QAV +A+ ++T +++D G + P+ +G + I + LAG L N+ ++ F Sbjct: 21 WTRFG---YAGEESPMTILPS------YYGVRSDVTGRNKYVVDELQIHAPIPGMEVKNGKSNGIIQDWESTLYTWERGLKEKLQVNPTEYAMMITEPSWNPQSVRQQIMEAAFEQLHVPAFYLTKQAVCVAFANSKSTALIVDIGSDNASVTPVVDGLIIRKGIFKQSLAGDFLNANIEQLFNTMNIEF 201
BLAST of CK936495 vs. ExPASy Swiss-Prot
Match: ARP7_ORYSJ (Actin-related protein 7 OS=Oryza sativa subsp. japonica GN=ARP7 PE=2 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 5.257e-17 Identity = 56/165 (33.94%), Postives = 81/165 (49.09%), Query Frame = 1 Query: 187 DDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELR-VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLFLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD 678 D +P V PS + + +D +GD A + + P+ G V +WD ME + ++ Y+ + +E +L TE PKA RE++ Q+MFE FN Y + QAVL LYA GR +G +D G G P+ EG A R D+ G DLT+ Sbjct: 21 DQSPSLVMPS----------KMKLEVEDGQMGDGAVVEEVV----QPVVRGFVKDWDAMEDLLNYVLYSNIGWEIGDEGQILFTEPLFTPKALREQLAQLMFEKFNVSGFYDSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVCEGAVQHIASKRFDIGGTDLTN 171
BLAST of CK936495 vs. ExPASy Swiss-Prot
Match: ARP7_ORYSI (Actin-related protein 7 OS=Oryza sativa subsp. indica GN=ARP7 PE=2 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 5.257e-17 Identity = 56/165 (33.94%), Postives = 81/165 (49.09%), Query Frame = 1 Query: 187 DDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELR-VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLFLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD 678 D +P V PS + + +D +GD A + + P+ G V +WD ME + ++ Y+ + +E +L TE PKA RE++ Q+MFE FN Y + QAVL LYA GR +G +D G G P+ EG A R D+ G DLT+ Sbjct: 21 DQSPSLVMPS----------KMKLEVEDGQMGDGAVVEEVV----QPVVRGFVKDWDAMEDLLNYVLYSNIGWEIGDEGQILFTEPLFTPKALREQLAQLMFEKFNVSGFYDSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVCEGAVQHIASKRFDIGGTDLTN 171 The following BLAST results are available for this feature:
BLAST of CK936495 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 458
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK936495 ID=CK936495; Name=CK936495; organism=Citrus sinensis; type=EST; length=754bpback to top |