CK936483

Overview
NameCK936483
Unique NameCK936483
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length898
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936483 vs. ExPASy Swiss-Prot
Match: PIP24_ARATH (Probable aquaporin PIP2-4 OS=Arabidopsis thaliana GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 9.023e-25
Identity = 66/169 (39.05%), Postives = 95/169 (56.21%), Query Frame = 3
Query:  297 ISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTT----SAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYEF 770
            ISGGH+NPAVT G F+   +SL+R +LY +AQ LG+   C  +K   +   T     A  L+ G      +  EI+ TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    L      G  +NPA SFG A++     +WD+ W++WVGP+IG   A   ++F
Sbjct:  101 ISGGHINPAVTVGLFLARKVSLVRTVLYIVAQCLGAICGCGFVKAFQSSYYTRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKAWDDQWIFWVGPMIGAAAAAFYHQF 268          
BLAST of CK936483 vs. ExPASy Swiss-Prot
Match: PIP25_ORYSJ (Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica GN=PIP2-5 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.010e-24
Identity = 75/232 (32.33%), Postives = 114/232 (49.14%), Query Frame = 3
Query:  123 RAALAEFISTLISVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXX------NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNG----QTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYE 767
            RA +AEF++TL+ ++    + + +   T   A+                               ISGGH+NPAVTFG F+   +SL+R ILY +AQ LG+     L+K   +         A  L++G      +  EI+ TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    L      G  +NPA S G A+V   S +W + W++WVGP IG  +A + ++
Sbjct:   36 RAVIAEFVATLLFLYVTVATVIGYKHQTDASASGDDAACGGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRAILYIVAQCLGAVCGVALVKGFQSSFYDRYGGGANELAAGYSKGTGLAAEIIGTFVLVYTVF-SATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVVYNNSKAWSDQWIFWVGPFIGAAIAALYHQ 266          
BLAST of CK936483 vs. ExPASy Swiss-Prot
Match: PIP27_ARATH (Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7 PE=1 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 5.849e-24
Identity = 79/233 (33.91%), Postives = 115/233 (49.36%), Query Frame = 3
Query:  123 RAALAEFISTLISVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLK-FVTNGQTT---SAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQS 788
            RA +AEFI+TL+ ++    + +   K T  G                           ISGGH+NPAVTFG F+   +SL+R + Y IAQ LG+      +K F+     T    A  ++ G     A+  EI+ TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    L      G  +NPA SFG A++     +WD+ W++WVGP + G LA   Y  + +  S
Sbjct:   38 RALIAEFIATLLFLYVTVATVIGHKKQT--GPCDGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALGYMIAQCLGAICGVGFVKAFMKTPYNTLGGGANTVADGYSKGTALGAEIIGTFVLVYTVF-SATDPKRSARDSHIPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKAWDDQWIFWVGPFL-GALAAAAYHQYILRAS 266          
BLAST of CK936483 vs. ExPASy Swiss-Prot
Match: PIP26_ORYSJ (Probable aquaporin PIP2-6 OS=Oryza sativa subsp. japonica GN=PIP2-6 PE=2 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 5.849e-24
Identity = 71/227 (31.28%), Postives = 112/227 (49.34%), Query Frame = 3
Query:  123 RAALAEFISTLISVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVT----NGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYEF 770
            RA +AEFI+TL+ ++    + + +   +                              ISGGH+NPAVTFG  +   +S++R ++Y +AQ LG  V   ++K +     N     A  ++SG     A+  EI+ TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    L      G  +NPA S G A++     +WD+HW++W GP IG   A   +++
Sbjct:   38 RALIAEFIATLLFLYITVATVIGYKVQSSADQCGGVGTLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLLLARKVSVIRAVMYIVAQCLGGIVGVGIVKGIMKHQYNANGGGANMVASGYSTGTALGAEIIGTFVLVYTVF-SATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSIGAAVIYNQKKAWDDHWIFWAGPFIGALAAAAYHQY 263          
BLAST of CK936483 vs. ExPASy Swiss-Prot
Match: PIP27_ORYSJ (Probable aquaporin PIP2-7 OS=Oryza sativa subsp. japonica GN=PIP2-7 PE=2 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 7.639e-24
Identity = 77/238 (32.35%), Postives = 119/238 (50.00%), Query Frame = 3
Query:  123 RAALAEFISTLISVFAGEGSGMAF-NKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVT----NGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHEQL 800
            RA +AEF++TLI ++    + + + N+     A T                        +SGGH+NPAVT G F G  +SL+R +LY +AQ LG+     ++K +     +     A  +S G  A  A+  EIV TF LVYTV+ +A DPK+ +    +  + P+ IGF V    L      G  +NPA S G A++     +W +HW++WVGP+IG  LA   ++     ++ + L
Sbjct:   44 RALIAEFMATLIFLYVSIATVIGYKNQRATVDACTGVGYLGVAWSFGATIFVLVYCTGGVSGGHINPAVTLGLFFGRKLSLVRTVLYVVAQCLGAIAGAGIVKGIMKRPYDALGGGANTVSDGYSAAGALGAEIVGTFILVYTVF-SATDPKRTARDSFIPVLVPLPIGFAVFVVHLATIPITGTGINPARSLGAAVLYNQHAAWKDHWIFWVGPVIGAFLAAAYHKLVLRGEAAKAL 280          
BLAST of CK936483 vs. ExPASy Swiss-Prot
Match: PIP28_ARATH (Probable aquaporin PIP2-8 OS=Arabidopsis thaliana GN=PIP2-8 PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.303e-23
Identity = 77/231 (33.33%), Postives = 113/231 (48.92%), Query Frame = 3
Query:  123 RAALAEFISTLISVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKF--------VTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYEF 770
            RA +AEFI+TL+ ++    + +     T  G                           ISGGH+NPAVTFG F+   +SL R + Y +AQ LG+     L+K         +  G  T A   S+G     A+  EI+ TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    L      G  +NPA SFG A++     +WD+HW++WVGP +G   A   +++
Sbjct:   36 RAIIAEFIATLLFLYVTVATVIGHKNQT--GPCGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLPRAVAYMVAQCLGAICGVGLVKAFMMTPYKRLGGGANTVADGYSTG----TALGAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKAWDDHWIFWVGPFVGALAAAAYHQY 259          
BLAST of CK936483 vs. ExPASy Swiss-Prot
Match: PIP12_ORYSJ (Probable aquaporin PIP1-2 OS=Oryza sativa subsp. japonica GN=PIP1-2 PE=2 SV=3)

HSP 1 Score: 110.538 bits (275), Expect = 1.303e-23
Identity = 76/226 (33.63%), Postives = 112/226 (49.56%), Query Frame = 3
Query:  123 RAALAEFISTLISVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNG--QTT--SAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYE 767
            RA +AEF++T + ++    + M  N  T   A                          ISGGH+NPAVTFG F+   +SL R + Y + Q LG+     ++K    G  +TT   A  ++ G    + +  EIV TF LVYTV+ +A D K+ +    +  +AP+ IGF V    L      G  +NPA S G A++     +WD+HW++WVGP IG  LA I ++
Sbjct:   54 RAGIAEFMATFLFLYITVLTVMGVNNSTSKCATV--GIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFQKGLYETTGGGANVVAPGYTKGDGLGAEIVGTFILVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRGHAWDDHWIFWVGPFIGAALAAIYHQ 276          
BLAST of CK936483 vs. ExPASy Swiss-Prot
Match: AQP6_MOUSE (Aquaporin-6 OS=Mus musculus GN=Aqp6 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.303e-23
Identity = 79/220 (35.91%), Postives = 104/220 (47.27%), Query Frame = 3
Query:  123 RAALAEFISTLISVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNG---QTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIA-IGFIVGANILVGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 770
            +A  AEF++T + VF G GS + +          PS                       SG H NPAVT    VG +ISL R + Y  AQL G+T    LL  VT G   +T     + +      AV  E+V+T  LV  V+A+      G     +P A IG  V    L+G  F G SMNPA SFGPA++   +  HW++WVGPL G  LA ++Y F
Sbjct:   22 KALFAEFLATGLYVFFGVGSVLPWP------VALPSVLQIAITFNLATATAVQISWKT-SGAHANPAVTLAYLVGSHISLPRAMAYIAAQLAGATAGAALLYGVTPGGIRETLGVNVVHNSTSTGQAVAVELVLTLQLVLCVFASM----DGRQTLASPAAMIGTSVALGHLIGIYFTGCSMNPARSFGPAVIVGKFAVHWIFWVGPLTGAVLASLIYNF 230          
BLAST of CK936483 vs. ExPASy Swiss-Prot
Match: PIP15_MAIZE (Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.903e-23
Identity = 77/233 (33.05%), Postives = 113/233 (48.50%), Query Frame = 3
Query:   99 EATHPDALRAALAEFISTLISVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTN----GQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVY 764
            E T     RA +AEF++T + ++    + M  +K +   A                          ISGGH+NPAVTFG F+   +SL R + Y + Q LG+     ++K        G    A A++ G    + +  EIV TF LVYTV+ +A D K+ +    +  +AP+ IGF V    L      G  +NPA S G A+V   S +W++HW++WVGP IG  LA I +
Sbjct:   46 ELTSWSFYRAGIAEFVATFLFLYISILTVMGVSKSSSKCATV--GIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFQEGLYMGAGGGANAVNPGYTKGDGLGAEIVGTFVLVYTVF-SATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIVYNRSHAWNDHWIFWVGPFIGAALAAIYH 275          
BLAST of CK936483 vs. ExPASy Swiss-Prot
Match: PIP24_ORYSJ (Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica GN=PIP2-4 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.791e-23
Identity = 73/232 (31.47%), Postives = 115/232 (49.57%), Query Frame = 3
Query:  123 RAALAEFISTLISVFAGEGSGMAFNKLTH---NGANTPSXXXXXXXXXXXXXXXXXXXXX---NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLK----FVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYE 767
            RA +AEF++TL+ ++    + + +   T    NGA+                            +SGGH+NPAVT G F+   +SL+R +LY  AQ LG+     L+K     + +     A  L++G      +  EI+ TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    L      G  +NPA S G A+V   + +W + W++WVGP IG  +A + ++
Sbjct:   39 RALIAEFVATLLFLYVTVATVIGYKHQTDAAVNGADAACGGVGVLGIAWAFGGMIFILVYCTAGVSGGHINPAVTLGLFLARKVSLVRALLYMAAQCLGAICGVALVKGFQSSLYDRYGGGANELAAGYSTGTGLAAEIIGTFVLVYTVF-SATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGVAVVYNNNKAWSDQWIFWVGPFIGAAIAALYHQ 269          
The following BLAST results are available for this feature:
BLAST of CK936483 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 193
Match NameE-valueIdentityDescription
PIP24_ARATH9.023e-2539.05Probable aquaporin PIP2-4 OS=Arabidopsis thaliana ... [more]
PIP25_ORYSJ2.010e-2432.33Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica G... [more]
PIP27_ARATH5.849e-2433.91Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7... [more]
PIP26_ORYSJ5.849e-2431.28Probable aquaporin PIP2-6 OS=Oryza sativa subsp. j... [more]
PIP27_ORYSJ7.639e-2432.35Probable aquaporin PIP2-7 OS=Oryza sativa subsp. j... [more]
PIP28_ARATH1.303e-2333.33Probable aquaporin PIP2-8 OS=Arabidopsis thaliana ... [more]
PIP12_ORYSJ1.303e-2333.63Probable aquaporin PIP1-2 OS=Oryza sativa subsp. j... [more]
AQP6_MOUSE1.303e-2335.91Aquaporin-6 OS=Mus musculus GN=Aqp6 PE=2 SV=1[more]
PIP15_MAIZE2.903e-2333.05Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1[more]
PIP24_ORYSJ3.791e-2331.47Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica G... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004521_H05 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0001_IVF_H05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936483 ID=CK936483; Name=CK936483; organism=Citrus sinensis; type=EST; length=898bp
GGGGACGTGAACCAGTAGTAATCACACCCCAAAGGTTCAATCTTCATCGT
TTGTTCTCCATCATGCCGATCAGAAACATTGCCGTTGGCCATCCCCGTGA
GGCGACTCACCCAGATGCCCTAAGGGCAGCCCTAGCAGAGTTCATCTCAA
CTCTAATATCTGTCTTTGCCGGTGAAGGCTCGGGCATGGCCTTCAACAAG
CTCACTCACAACGGCGCCAATACCCCCTCCGGCCTCGTCGCCGCCTCTGT
TGCTCACGCTTTCGCCCTTTTCGTTGCTGTCGCCGTTGGCGCCAACATTT
CCGGTGGCCACGTTAATCCTGCTGTCACCTTTGGCGCCTTCGTTGGAGGT
AACATCTCCCTTCTACGTGGCATCCTCTACTGGATCGCCCAGCTTCTTGG
ATCCACCGTCGCATGCTTGCTTCTTAAGTTCGTTACCAACGGCCAGACCA
CATCTGCTTTTGCTCTCTCATCTGGAGTTGGTGCATGGAACGCAGTCGTT
TTCGAGATCGTGATGACATTCGGACTAGTGTACACAGTGTATGCCACAGC
CCTGGACCCAAAGAAGGGAAGCTTGGGGACAATTGCACCAATTGCAATTG
GTTTCATTGTAGGAGCCAACATCTTGGTGGGCGGGGCGTTTGATGGAGCT
TCAATGAACCCAGCAGTGTCATTCGGGCCAGCTTTGGTGAGCTGGAGCTG
GGACAACCACTGGGTCTACTGGGTCGGGCCACTCATCGGTGGTGGGCTAG
CTGGCATCGTCTACGAGTTCTTCTTCATTAACCAGTCGCATGAGCAGCTC
CCAACAACCGAGTACTAAGCTAAAAGCTTGCCATCTATGTGAGTTTGCAC
GGATGTTGTATTTAATTTGCTTTTACCGAGGTTCTTTCTTTTTATTTT
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