CK936483

Overview
NameCK936483
Unique NameCK936483
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length898
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936483 vs. ExPASy Swiss-Prot
Match: NIP23_MAIZE (Aquaporin NIP2-3 OS=Zea mays GN=NIP2-3 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.380e-17
Identity = 52/159 (32.70%), Postives = 81/159 (50.94%), Query Frame = 3
Query:  294 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 770
            +ISG H+NPAVT       +   ++   YW AQ  G+  A  +LK V            SG   W+A+  EIV+TF +++   A A D +  ++G +A +A+G  V    +  G   G SMNPA +  PA+ S  +   W+Y++GP++G      VY +
Sbjct:  107 HISGAHMNPAVTLSFACFRHFPWIQVPFYWAAQFTGAMCAAFVLKAVLQPIAVIGTTTPSGPH-WHALAIEIVVTFNMMFVTCAVATDSR--AVGELAGLAVGSAVCITSIFAGPVSGGSMNPARTLAPAVASNVFTGLWIYFLGPVVGTLSGAWVYTY 262          
BLAST of CK936483 vs. ExPASy Swiss-Prot
Match: AQPZ_PHOLL (Aquaporin Z OS=Photorhabdus luminescens subsp. laumondii GN=aqpZ PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.380e-17
Identity = 69/233 (29.61%), Postives = 103/233 (44.21%), Query Frame = 3
Query:  120 LRAALAEFISTLISVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQ-----TTSAFALS-------SGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALV--SWSWDNHWVYWVGPLIGGGLAGIVYEFFF 776
            LR   AE + T + VF G GS +        G                          +ISGGH NPAVT G + GG    +  I Y I+Q++G  +A  +L  + +GQ     TTS FA +        G    +A+V EIV+T   ++ +       ++   G  AP+AIG  +    L+       S+NPA S   A+   +W+ +  W +WV P+IGG + G +Y   F
Sbjct:    2 LRKLAAELLGTFVLVFGGCGSVVFAAAFPELGIG----FVGVSLAFGLTVLTMIYAVGHISGGHFNPAVTIGLWAGGRFRAVEVIPYIISQVIGGILAAAVLYVIASGQVGFDATTSGFASNGFGEHSPGGFSLQSAIVAEIVLT--AIFLIVIIGATDRRAPPG-FAPLAIGLALVLINLISIPITNTSVNPARSTAVAIFQNTWALEQLWFFWVMPIIGGIVGGGIYRLLF 227          
BLAST of CK936483 vs. ExPASy Swiss-Prot
Match: NIP71_ARATH (Probable aquaporin NIP7-1 OS=Arabidopsis thaliana GN=NIP7-1 PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 4.060e-17
Identity = 51/157 (32.48%), Postives = 80/157 (50.96%), Query Frame = 3
Query:  294 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVY 764
            +ISG H+NP++T    V G     +  LY  AQ LG+T A L+   V  G      A    +   +A   E++ T  +V+   A    P + +LG +    IG ++   +L+ G   G SMNPA S GPA+V+W +++ W+Y   P+IG  +  + Y
Sbjct:   98 HISGAHLNPSITIAFAVFGGFPWSQVPLYITAQTLGATAATLVGVSVY-GVNADIMATKPALSCVSAFFVELIATSIVVFLASALHCGPHQ-NLGNLTGFVIGTVISLGVLITGPISGGSMNPARSLGPAVVAWDFEDLWIYMTAPVIGAIIGVLTY 252          
BLAST of CK936483 vs. ExPASy Swiss-Prot
Match: NIP11_ORYSJ (Aquaporin NIP1-1 OS=Oryza sativa subsp. japonica GN=NIP1-1 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.060e-17
Identity = 56/183 (30.60%), Postives = 90/183 (49.18%), Query Frame = 3
Query:  294 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFF-FINQSHEQLPTTEY*AKSLPSM 839
            +ISG H NPAVT            +   Y  AQ+LG+T+A   L+ +  G+               ++V E ++TF L++ +   A D +  ++G +A +A+G  +  N+L+ G   GASMNPA S GPA++   + + WVY VGP+ G       Y    F N+   ++  +    KS+  M
Sbjct:  100 HISGAHFNPAVTLAFATCRRFPWRQVPAYAAAQMLGATLAAGTLRLMFGGRHEHFPGTLPAGSDVQSLVLEFIITFYLMFVISGVATDNR--AIGELAGLAVGATILLNVLIAGPISGASMNPARSLGPAMIGGEYRSIWVYIVGPVAGAVAGAWAYNIIRFTNKPLREITKSGSFLKSMNRM 280          
BLAST of CK936483 vs. ExPASy Swiss-Prot
Match: AQPZ_RHOPA (Aquaporin Z OS=Rhodopseudomonas palustris GN=aqpZ PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.060e-17
Identity = 62/172 (36.05%), Postives = 87/172 (50.58%), Query Frame = 3
Query:  294 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGV----------GAWNAV---VFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALV--SWSWDNHWVYWVGPLIGGGLAGIVY 764
            +ISG H+NPAVT G   GG   + +   Y IAQ+LG+  A  LL  + +G   + F L+ G           G +N V   V E+VMT   ++ +  +     K   G  AP+AIG  +    LV       S+NPA S GPAL    W+    W++WV PL+GG L G++Y
Sbjct:   57 HISGCHLNPAVTLGLAAGGRFPVKQIAPYIIAQVLGAIAAAALLYLIASG--AAGFDLAKGFASNGYGAHSPGQYNLVACFVMEVVMTMMFLFVIMGST--HGKAPAG-FAPLAIGLALVMIHLVSIPVTNTSVNPARSTGPALFVGGWAIGQLWLFWVAPLLGGVLGGVIY 223          
BLAST of CK936483 vs. ExPASy Swiss-Prot
Match: AQPZ_SHIFL (Aquaporin Z OS=Shigella flexneri GN=aqpZ PE=3 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 5.302e-17
Identity = 56/171 (32.75%), Postives = 86/171 (50.29%), Query Frame = 3
Query:  294 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQT-----TSAFALS-------SGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALV--SWSWDNHWVYWVGPLIGGGLAGIVY 764
            +ISGGH NPAVT G + GG       + Y IAQ++G  VA  LL  + +G+T      S FA +        G    +A+V E+V++ G +  ++       K +    APIAIG  +    L+       S+NPA S   A+    W+ +  W +WV P++GG + G++Y
Sbjct:   56 HISGGHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGAT---DKFAPAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIY 223          
BLAST of CK936483 vs. ExPASy Swiss-Prot
Match: AQPZ_ECOLI (Aquaporin Z OS=Escherichia coli (strain K12) GN=aqpZ PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.302e-17
Identity = 56/171 (32.75%), Postives = 86/171 (50.29%), Query Frame = 3
Query:  294 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQT-----TSAFALS-------SGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALV--SWSWDNHWVYWVGPLIGGGLAGIVY 764
            +ISGGH NPAVT G + GG       + Y IAQ++G  VA  LL  + +G+T      S FA +        G    +A+V E+V++ G +  ++       K +    APIAIG  +    L+       S+NPA S   A+    W+ +  W +WV P++GG + G++Y
Sbjct:   56 HISGGHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGAT---DKFAPAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIY 223          
BLAST of CK936483 vs. ExPASy Swiss-Prot
Match: AQPZ_ECOL6 (Aquaporin Z OS=Escherichia coli O6 GN=aqpZ PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.302e-17
Identity = 56/171 (32.75%), Postives = 86/171 (50.29%), Query Frame = 3
Query:  294 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQT-----TSAFALS-------SGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALV--SWSWDNHWVYWVGPLIGGGLAGIVY 764
            +ISGGH NPAVT G + GG       + Y IAQ++G  VA  LL  + +G+T      S FA +        G    +A+V E+V++ G +  ++       K +    APIAIG  +    L+       S+NPA S   A+    W+ +  W +WV P++GG + G++Y
Sbjct:   56 HISGGHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGAT---DKFAPAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIY 223          
BLAST of CK936483 vs. ExPASy Swiss-Prot
Match: AQPZ_ECO57 (Aquaporin Z OS=Escherichia coli O157:H7 GN=aqpZ PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.302e-17
Identity = 56/171 (32.75%), Postives = 86/171 (50.29%), Query Frame = 3
Query:  294 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQT-----TSAFALS-------SGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALV--SWSWDNHWVYWVGPLIGGGLAGIVY 764
            +ISGGH NPAVT G + GG       + Y IAQ++G  VA  LL  + +G+T      S FA +        G    +A+V E+V++ G +  ++       K +    APIAIG  +    L+       S+NPA S   A+    W+ +  W +WV P++GG + G++Y
Sbjct:   56 HISGGHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGAT---DKFAPAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIY 223          
BLAST of CK936483 vs. ExPASy Swiss-Prot
Match: NIP61_ARATH (Aquaporin NIP6-1 OS=Arabidopsis thaliana GN=NIP6-1 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.925e-17
Identity = 67/220 (30.45%), Postives = 99/220 (45.00%), Query Frame = 3
Query:  135 AEFISTLISVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHE 794
            AEF+ TLI +FAG  + +   K   +GA T                       +ISG H+NPAVT       +       +Y  AQ++ S  A   LK V    T S       VG   A   E +++F L++ V A A D +  ++G +A IA+G  V  NIL+ G    ASMNP  + GPA+ + ++   WVY   P++G  +    Y    + +  E
Sbjct:   84 AEFVGTLILIFAGTATAIVNQKT--DGAET---LIGCAASAGLAVMIVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQVMASVSAAFALKAVFE-PTMSGGVTVPTVGLSQAFALEFIISFNLMFVVTAVATDTR--AVGELAGIAVGATVMLNILIAGPATSASMNPVRTLGPAIAANNYRAIWVYLTAPILGALIGAGTYTIVKLPEEDE 295          
The following BLAST results are available for this feature:
BLAST of CK936483 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 193
Match NameE-valueIdentityDescription
NIP23_MAIZE2.380e-1732.70Aquaporin NIP2-3 OS=Zea mays GN=NIP2-3 PE=2 SV=1[more]
AQPZ_PHOLL2.380e-1729.61Aquaporin Z OS=Photorhabdus luminescens subsp. lau... [more]
NIP71_ARATH4.060e-1732.48Probable aquaporin NIP7-1 OS=Arabidopsis thaliana ... [more]
NIP11_ORYSJ4.060e-1730.60Aquaporin NIP1-1 OS=Oryza sativa subsp. japonica G... [more]
AQPZ_RHOPA4.060e-1736.05Aquaporin Z OS=Rhodopseudomonas palustris GN=aqpZ ... [more]
AQPZ_SHIFL5.302e-1732.75Aquaporin Z OS=Shigella flexneri GN=aqpZ PE=3 SV=2[more]
AQPZ_ECOLI5.302e-1732.75Aquaporin Z OS=Escherichia coli (strain K12) GN=aq... [more]
AQPZ_ECOL65.302e-1732.75Aquaporin Z OS=Escherichia coli O6 GN=aqpZ PE=3 SV... [more]
AQPZ_ECO575.302e-1732.75Aquaporin Z OS=Escherichia coli O157:H7 GN=aqpZ PE... [more]
NIP61_ARATH6.925e-1730.45Aquaporin NIP6-1 OS=Arabidopsis thaliana GN=NIP6-1... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004521_H05 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0001_IVF_H05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936483 ID=CK936483; Name=CK936483; organism=Citrus sinensis; type=EST; length=898bp
GGGGACGTGAACCAGTAGTAATCACACCCCAAAGGTTCAATCTTCATCGT
TTGTTCTCCATCATGCCGATCAGAAACATTGCCGTTGGCCATCCCCGTGA
GGCGACTCACCCAGATGCCCTAAGGGCAGCCCTAGCAGAGTTCATCTCAA
CTCTAATATCTGTCTTTGCCGGTGAAGGCTCGGGCATGGCCTTCAACAAG
CTCACTCACAACGGCGCCAATACCCCCTCCGGCCTCGTCGCCGCCTCTGT
TGCTCACGCTTTCGCCCTTTTCGTTGCTGTCGCCGTTGGCGCCAACATTT
CCGGTGGCCACGTTAATCCTGCTGTCACCTTTGGCGCCTTCGTTGGAGGT
AACATCTCCCTTCTACGTGGCATCCTCTACTGGATCGCCCAGCTTCTTGG
ATCCACCGTCGCATGCTTGCTTCTTAAGTTCGTTACCAACGGCCAGACCA
CATCTGCTTTTGCTCTCTCATCTGGAGTTGGTGCATGGAACGCAGTCGTT
TTCGAGATCGTGATGACATTCGGACTAGTGTACACAGTGTATGCCACAGC
CCTGGACCCAAAGAAGGGAAGCTTGGGGACAATTGCACCAATTGCAATTG
GTTTCATTGTAGGAGCCAACATCTTGGTGGGCGGGGCGTTTGATGGAGCT
TCAATGAACCCAGCAGTGTCATTCGGGCCAGCTTTGGTGAGCTGGAGCTG
GGACAACCACTGGGTCTACTGGGTCGGGCCACTCATCGGTGGTGGGCTAG
CTGGCATCGTCTACGAGTTCTTCTTCATTAACCAGTCGCATGAGCAGCTC
CCAACAACCGAGTACTAAGCTAAAAGCTTGCCATCTATGTGAGTTTGCAC
GGATGTTGTATTTAATTTGCTTTTACCGAGGTTCTTTCTTTTTATTTT
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