CK936483

Overview
NameCK936483
Unique NameCK936483
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length898
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig239 contig Csv1_Contig239:93..990. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK936483 vs. ExPASy Swiss-Prot
Match: AQP1_PIG (Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3)

HSP 1 Score: 134.806 bits (338), Expect = 6.452e-31
Identity = 79/229 (34.50%), Postives = 121/229 (52.84%), Query Frame = 3
Query:  123 RAALAEFISTLISVFAGEGSGMAFNKLTHNG--ANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTN---GQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHE 794
            RA +AEF++  + +F   GS + F     N   +                         +ISG H+NPAVT G  +   IS+LR ++Y IAQ +G+ VA  +L  +T+   G +    +L+ GV +   +  EI+ T  LV  V AT  D ++  LG  AP+AIGF V    L+   + G  +NPA SFG A+++ ++ +HWV+WVGP IGG LA ++Y+F    +S +
Sbjct:   12 RAVVAEFLAMTLFIFISIGSALGFQYPVRNNQTSGAAQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISVLRAVMYIIAQCVGAIVATAILSGITSSLPGNSLGLNSLAPGVDSGQGLGIEIIGTLQLVLCVLATT-DRRRRDLGGSAPLAIGFSVALGHLLAIDYTGCGINPARSFGSAVITHNFQDHWVFWVGPFIGGALAVLIYDFILAPRSSD 239          
BLAST of CK936483 vs. ExPASy Swiss-Prot
Match: AQP4_MOUSE (Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 8.426e-31
Identity = 79/221 (35.75%), Postives = 118/221 (53.39%), Query Frame = 3
Query:  123 RAALAEFISTLISVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVG---AWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFF 776
            +A  AEF++TLI V  G GS + +    +     P                      +ISGGH+NPAVT        IS+ + + Y IAQ LG+ +   +L  VT         +++  G   A + ++ E+++TF LV+T++A+    +    G+IA +AIGF V    L    + GASMNPA SFGPA++  +W NHW+YWVGP++G  LAG +YE+ F
Sbjct:   36 KAVSAEFLATLIFVLLGVGSTINWGGSENP---LPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIIAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIA-LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWANHWIYWVGPIMGAVLAGALYEYVF 252          
BLAST of CK936483 vs. ExPASy Swiss-Prot
Match: AQPA_RANES (Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.452e-30
Identity = 77/223 (34.53%), Postives = 117/223 (52.47%), Query Frame = 3
Query:  123 RAALAEFISTLISVFAGEGSGMAFNKLTHNGANTP----SXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFAL---SSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 770
            RA +AEF++ ++ VF   G+ + FN      AN                            ++SG H+NPAVT G  +   IS+L+ ++Y IAQ LG+ VA  +L  +T+G   ++  L   S GV A   +  EI++TF LV  V A   D ++  +    P+AIG  V    L+   + G  MNPA SFG A+++ ++  HW++WVGP+IGG  A I+Y+F
Sbjct:   12 RAVIAEFLAMILFVFISIGAALGFNFPIEEKANQTVGRSQDIVKVSLAFGISIATMAQSVGHVSGAHLNPAVTLGCLLSCQISILKAVMYIIAQCLGAVVATAILSGITSGLENNSLGLNGLSPGVSAGQGLGVEILVTFQLVLCVVAVT-DRRRHDVSGSVPLAIGLSVALGHLIAIDYTGCGMNPARSFGSAVLTKNFTYHWIFWVGPMIGGAAAAIIYDF 233          
BLAST of CK936483 vs. ExPASy Swiss-Prot
Match: AQP1_RAT (Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4)

HSP 1 Score: 132.88 bits (333), Expect = 2.452e-30
Identity = 77/227 (33.92%), Postives = 117/227 (51.54%), Query Frame = 3
Query:  123 RAALAEFISTLISVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFA---LSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHE 794
            RA +AEF++  + VF   GS + FN                                +ISG H+NPAVT G  +   IS+LR ++Y IAQ +G+ VA  +L  +T+    ++     L+ GV +   +  EI+ T  LV  V AT  D ++  LG  AP+AIG  V    L+   + G  +NPA SFG A+++ ++ NHW++WVGP IG  LA ++Y+F    +S +
Sbjct:   12 RAVVAEFLAMTLFVFISIGSALGFNYPLERNQTLVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVASAILSGITSSLLENSLGRNDLARGVNSGQGLGIEIIGTLQLVLCVLATT-DRRRRDLGGSAPLAIGLSVALGHLLAIDYTGCGINPARSFGSAVLTRNFSNHWIFWVGPFIGSALAVLIYDFILAPRSSD 237          
BLAST of CK936483 vs. ExPASy Swiss-Prot
Match: AQP1_CANFA (Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3)

HSP 1 Score: 132.88 bits (333), Expect = 2.452e-30
Identity = 77/229 (33.62%), Postives = 120/229 (52.40%), Query Frame = 3
Query:  123 RAALAEFISTLISVFAGEGSGMAFNKLTHNG--ANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFA---LSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHE 794
            RA +AEF++ ++ VF   GS + FN    N   A                         +ISG H+NPAVT G  +   IS+LR ++Y IAQ +G+ VA  +L  +T+    ++     L+ GV +   +  EI+ T  LV  V AT  D ++  LG   P+AIG  V    L+   + G  +NPA SFG ++++ ++ +HW++WVGP IGG LA ++Y+F    +S +
Sbjct:   12 RAVVAEFLAMILFVFISIGSALGFNYPVRNNQTAGAAQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVATAILSGITSSLPDNSLGRNELAPGVNSGQGLGIEIIGTLQLVLCVLATT-DRRRRDLGGSGPLAIGLSVALGHLLAIDYTGCGINPARSFGSSVITHNFKDHWIFWVGPFIGGALAVLIYDFILAPRSSD 239          
BLAST of CK936483 vs. ExPASy Swiss-Prot
Match: AQP1_SHEEP (Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3)

HSP 1 Score: 131.339 bits (329), Expect = 7.133e-30
Identity = 75/229 (32.75%), Postives = 122/229 (53.28%), Query Frame = 3
Query:  123 RAALAEFISTLISVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXX--NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAF---ALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHE 794
            RA +AEF++ ++ +F   GS + F+    +   T +                       +ISG H+NPAVT G  +   IS+LR I+Y IAQ +G+ VA ++L  +T+    ++    AL+ GV +   +  EI+ T  LV  V AT    ++  LG   P+AIGF V    L+   + G  +NPA SFG ++++ ++ +HW++WVGP IG  LA ++Y+F    +S +
Sbjct:   12 RAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAIMYIIAQCVGAIVATVILSGITSSLPDNSLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRRDLGDSGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVITHNFQDHWIFWVGPFIGAALAVLIYDFILAPRSSD 240          
BLAST of CK936483 vs. ExPASy Swiss-Prot
Match: AQP4_NOTAL (Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 9.316e-30
Identity = 67/164 (40.85%), Postives = 100/164 (60.98%), Query Frame = 3
Query:  294 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVG---AWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFF 776
            +ISGGH+NPAVT        IS+ + + Y  AQ LG+ +   +L  VT         +++  G   A + ++ E+++TF LV+T++A+    +    G+IA +AIGF V    L    + GASMNPA SFGPA++  +W+NHW+YWVGP+IG  LAG +YE+ F
Sbjct:   93 HISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPNVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIA-LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYVF 255          
BLAST of CK936483 vs. ExPASy Swiss-Prot
Match: AQP4_RAT (Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.217e-29
Identity = 66/164 (40.24%), Postives = 100/164 (60.98%), Query Frame = 3
Query:  294 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVG---AWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFF 776
            +ISGGH+NPAVT        IS+ + + Y  AQ LG+ +   +L  VT         +++  G   A + ++ E+++TF LV+T++A+    +    G++A +AIGF V    L    + GASMNPA SFGPA++  +W+NHW+YWVGP+IG  LAG +YE+ F
Sbjct:   90 HISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSVA-LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYVF 252          
BLAST of CK936483 vs. ExPASy Swiss-Prot
Match: AQP_AEDAE (Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 PE=2 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 2.075e-29
Identity = 76/221 (34.39%), Postives = 111/221 (50.23%), Query Frame = 3
Query:  123 RAALAEFISTLISVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSS---GVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFF 776
            R  +AEF+ T   V  G GS M +      G +                        ++SG H+NPAVT G  +  +IS+L+G  Y ++Q +G+     L+K  T         ++     + A   V+ E ++TF LV+ V+    D ++  +   AP+AIG  + A  L    + GASMNPA SFGPA+V  +W + WVYWVGP++GG LAG VY  FF
Sbjct:   24 RMLVAEFLGTFFLVSIGIGSTMGW------GGDYAPTMTQIAFTFGLVVATLAQAFGHVSGCHINPAVTIGLMITADISILKGAFYIVSQCVGAIAGAALIKAATPSDVIGGLGVTGIDPRLTAGQGVMIEALITFILVFVVHGVC-DNRRSDIKGSAPLAIGLSITAGHLSAIKYTGASMNPARSFGPAVVMGNWTDQWVYWVGPIVGGILAGAVYRLFF 237          
BLAST of CK936483 vs. ExPASy Swiss-Prot
Match: AQP4_DIPME (Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.075e-29
Identity = 67/164 (40.85%), Postives = 100/164 (60.98%), Query Frame = 3
Query:  294 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVG---AWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFF 776
            +ISGGH+NPAVT        IS+ + + Y  AQ LG+ +   +L  VT         +++  G   A + ++ E+++TF LV+T++A+    +    G+IA +AIGF V    L    + GASMNPA SFGPA++  +W+NHW+YWVGP+IG  LAG +YE+ F
Sbjct:   90 HISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIA-LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGGLYEYVF 252          
The following BLAST results are available for this feature:
BLAST of CK936483 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 193
Match NameE-valueIdentityDescription
AQP1_PIG6.452e-3134.50Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3[more]
AQP4_MOUSE8.426e-3135.75Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2[more]
AQPA_RANES2.452e-3034.53Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 S... [more]
AQP1_RAT2.452e-3033.92Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4[more]
AQP1_CANFA2.452e-3033.62Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3[more]
AQP1_SHEEP7.133e-3032.75Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3[more]
AQP4_NOTAL9.316e-3040.85Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1[more]
AQP4_RAT1.217e-2940.24Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1[more]
AQP_AEDAE2.075e-2934.39Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 P... [more]
AQP4_DIPME2.075e-2940.85Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004521_H05 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0001_IVF_H05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936483 ID=CK936483; Name=CK936483; organism=Citrus sinensis; type=EST; length=898bp
GGGGACGTGAACCAGTAGTAATCACACCCCAAAGGTTCAATCTTCATCGT
TTGTTCTCCATCATGCCGATCAGAAACATTGCCGTTGGCCATCCCCGTGA
GGCGACTCACCCAGATGCCCTAAGGGCAGCCCTAGCAGAGTTCATCTCAA
CTCTAATATCTGTCTTTGCCGGTGAAGGCTCGGGCATGGCCTTCAACAAG
CTCACTCACAACGGCGCCAATACCCCCTCCGGCCTCGTCGCCGCCTCTGT
TGCTCACGCTTTCGCCCTTTTCGTTGCTGTCGCCGTTGGCGCCAACATTT
CCGGTGGCCACGTTAATCCTGCTGTCACCTTTGGCGCCTTCGTTGGAGGT
AACATCTCCCTTCTACGTGGCATCCTCTACTGGATCGCCCAGCTTCTTGG
ATCCACCGTCGCATGCTTGCTTCTTAAGTTCGTTACCAACGGCCAGACCA
CATCTGCTTTTGCTCTCTCATCTGGAGTTGGTGCATGGAACGCAGTCGTT
TTCGAGATCGTGATGACATTCGGACTAGTGTACACAGTGTATGCCACAGC
CCTGGACCCAAAGAAGGGAAGCTTGGGGACAATTGCACCAATTGCAATTG
GTTTCATTGTAGGAGCCAACATCTTGGTGGGCGGGGCGTTTGATGGAGCT
TCAATGAACCCAGCAGTGTCATTCGGGCCAGCTTTGGTGAGCTGGAGCTG
GGACAACCACTGGGTCTACTGGGTCGGGCCACTCATCGGTGGTGGGCTAG
CTGGCATCGTCTACGAGTTCTTCTTCATTAACCAGTCGCATGAGCAGCTC
CCAACAACCGAGTACTAAGCTAAAAGCTTGCCATCTATGTGAGTTTGCAC
GGATGTTGTATTTAATTTGCTTTTACCGAGGTTCTTTCTTTTTATTTT
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