CK936483

Overview
NameCK936483
Unique NameCK936483
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length898
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936483 vs. ExPASy Swiss-Prot
Match: AQP_HAEIX (Aquaporin OS=Haematobia irritans exigua PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.148e-26
Identity = 63/165 (38.18%), Postives = 95/165 (57.58%), Query Frame = 3
Query:  294 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKF----VTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFF 776
            +ISG H+NPAVT G  + G +S+++ +LY   Q +G+     ++K       +G      + SS +    AV+ E ++TF LV  V   + DP +  +   AP+A+G  + A  L      GASMNPA SFGPA+V   W +HWVYWVGP++G  +A ++Y+F F
Sbjct:   74 HISGCHINPAVTVGFLIVGEMSIIKSVLYIAVQCVGAIAGAAVIKVGVSEAVSGLDLGVSSFSSTLTVGQAVLIEALITFILVVVVKGVS-DPGRTDIKGSAPLAVGLSIAAGHLCAIKLTGASMNPARSFGPAVVQNMWIDHWVYWVGPIVGAIVAALLYKFVF 237          
BLAST of CK936483 vs. ExPASy Swiss-Prot
Match: AQP8_MOUSE (Aquaporin-8 OS=Mus musculus GN=Aqp8 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.148e-26
Identity = 66/162 (40.74%), Postives = 96/162 (59.26%), Query Frame = 3
Query:  294 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQ-----TTSAFAL-SSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIV 761
            NISGGH NPAV+    V G +  +  I YWI+QL G  +   L K V+  +     + +AFA+         A+  EI++T  LV  V   A++ K  ++G +AP +IGF V  +IL GG+  GA MNPA +FGPA+++  WD HW+YW+GPL+ G   G++
Sbjct:   85 NISGGHFNPAVSLAVTVIGGLKTMLLIPYWISQLFGGLIGAALAKVVSPEERFWNASGAAFAIVQEQEQVAEALGIEIILTMLLVLAVCMGAVNEK--TMGPLAPFSIGFSVIVDILAGGSISGACMNPARAFGPAVMAGYWDFHWIYWLGPLLAGLFVGLL 244          
BLAST of CK936483 vs. ExPASy Swiss-Prot
Match: AQP5_PIG (Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.148e-26
Identity = 76/227 (33.48%), Postives = 114/227 (50.22%), Query Frame = 3
Query:  120 LRAALAEFISTLISVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFA---LSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALVSWSWD-NHWVYWVGPLIGGGLAGIVYEFFFINQS 788
            L+A  AEF++TLI VF G  S + +        +                         +SGGH+NPA+T    VG  ISLLR + Y +AQL+G+     +L  +  G      A   L++      AVV E+++TF L   ++++    +   +G+ A ++IG  V    LVG  F G SMNPA SFGPA+V   +  +HWV+WVGP++G  +A I+Y +     S
Sbjct:   11 LKAVFAEFLATLIFVFFGLASALKW-------PSALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAVFYVVAQLVGAIAGAGILYGLAPGNARGNLAVNSLNNNTTPGQAVVVEMILTFQLALCIFSSTDSRRTSPVGSPA-LSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFSPSHWVFWVGPIVGAAVAAILYFYLLFPNS 229          
BLAST of CK936483 vs. ExPASy Swiss-Prot
Match: PIP25_ARATH (Probable aquaporin PIP2-5 OS=Arabidopsis thaliana GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.805e-26
Identity = 76/231 (32.90%), Postives = 113/231 (48.92%), Query Frame = 3
Query:  123 RAALAEFISTLISVFAGEGSGMAFNKLTHNGAN----TPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTT----SAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYEF 770
            RA +AEFI+TL+ ++    + + +   T    N    T                        ISGGH+NPAVTFG  +   ++L+R ++Y +AQ LG+     L+K   +   T     A  LS G      V  EI+ TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    L      G  +NPA S G A++     +WD+HW++WVGP  G  +A   ++F
Sbjct:   38 RALIAEFIATLLFLYVTIMTVIGYKSQTDPALNPDQCTGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLLLARKVTLVRAVMYMVAQCLGAICGVALVKAFQSAYFTRYGGGANGLSDGYSIGTGVAAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFIVHLATIPITGTGINPARSLGAAIIYNKDKAWDHHWIFWVGPFAGAAIAAFYHQF 267          
BLAST of CK936483 vs. ExPASy Swiss-Prot
Match: PIP24_MAIZE (Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.805e-26
Identity = 82/243 (33.74%), Postives = 119/243 (48.97%), Query Frame = 3
Query:   99 EATHPDALRAALAEFISTLISVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXX------NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLK------FVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYEF 770
            E T     RA +AEFI+TL+ ++    + + +   T   A+ P                             ISGGH+NPAVTFG F+   +SL+R +LY IAQ LG+     L+K      +V  G    A  LS G      +  EI+ TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    L      G  +NPA S G A++     +WD+ W++WVGPLIG  +A   +++
Sbjct:   33 ELTQWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDASASGPDAACGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIIAQCLGAICGVGLVKGFQSAYYVRYG--GGANELSDGYSKGTGLAAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWIFWVGPLIGAAIAAAYHQY 272          
BLAST of CK936483 vs. ExPASy Swiss-Prot
Match: PIP22_ARATH (Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2 PE=1 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 2.805e-26
Identity = 67/169 (39.64%), Postives = 96/169 (56.80%), Query Frame = 3
Query:  297 ISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTT----SAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYEF 770
            ISGGH+NPAVTFG F+   +SL+R +LY +AQ LG+      +K   +         A +L+ G      +  EI+ TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    L      G  +NPA SFG A++   S  WD+HW++WVGP IG  +A   ++F
Sbjct:   99 ISGGHINPAVTFGLFLARKVSLIRAVLYMVAQCLGAICGVGFVKAFQSSYYDRYGGGANSLADGYNTGTGLAAEIIGTFVLVYTVF-SATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKSKPWDDHWIFWVGPFIGAAIAAFYHQF 266          
BLAST of CK936483 vs. ExPASy Swiss-Prot
Match: PIP23_MAIZE (Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.663e-26
Identity = 82/243 (33.74%), Postives = 119/243 (48.97%), Query Frame = 3
Query:   99 EATHPDALRAALAEFISTLISVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXX------NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLK------FVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYEF 770
            E T     RA +AEFI+TL+ ++    + + +   T   A+ P                             ISGGH+NPAVTFG F+   +SL+R +LY IAQ LG+     L+K      +V  G    A  LS G      +  EI+ TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    L      G  +NPA S G A++     +WD+ W++WVGPLIG  +A   +++
Sbjct:   34 ELTKWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDAAASGPDAACGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIIAQCLGAICGVGLVKGFQSAYYVRYG--GGANELSDGYSKGTGLAAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWIFWVGPLIGAAIAAAYHQY 273          
BLAST of CK936483 vs. ExPASy Swiss-Prot
Match: PIP21_ARATH (Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1 PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.663e-26
Identity = 69/169 (40.83%), Postives = 96/169 (56.80%), Query Frame = 3
Query:  297 ISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTT----SAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYEF 770
            ISGGH+NPAVTFG F+   +SL R +LY IAQ LG+      +K   +   T     A +L+ G      +  EI+ TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    L      G  +NPA SFG A++   S  WD+HW++WVGP IG  +A   ++F
Sbjct:  101 ISGGHINPAVTFGLFLARKVSLPRALLYIIAQCLGAICGVGFVKAFQSSYYTRYGGGANSLADGYSTGTGLAAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKSKPWDDHWIFWVGPFIGAAIAAFYHQF 268          
BLAST of CK936483 vs. ExPASy Swiss-Prot
Match: PIP23_ARATH (Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3 PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.785e-26
Identity = 67/169 (39.64%), Postives = 96/169 (56.80%), Query Frame = 3
Query:  297 ISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTS----AFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYEF 770
            ISGGH+NPAVTFG F+   +SL+R +LY +AQ LG+      +K   +    +    A  L+ G      +  EI+ TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    L      G  +NPA SFG A++   S  WD+HW++WVGP IG  +A   ++F
Sbjct:   99 ISGGHINPAVTFGLFLARKVSLIRAVLYMVAQCLGAICGVGFVKAFQSSHYVNYGGGANFLADGYNTGTGLAAEIIGTFVLVYTVF-SATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNKSKPWDDHWIFWVGPFIGATIAAFYHQF 266          
BLAST of CK936483 vs. ExPASy Swiss-Prot
Match: PIP23_ORYSJ (Probable aquaporin PIP2-3 OS=Oryza sativa subsp. japonica GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 6.249e-26
Identity = 79/243 (32.51%), Postives = 119/243 (48.97%), Query Frame = 3
Query:   99 EATHPDALRAALAEFISTLISVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXX------NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLK------FVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYEF 770
            E T     RA +AEF++TL+ ++    + + +   +  GAN                               +SGGH+NPAVTFG F+   +SL+R +LY +AQ LG+     L+K      +V  G    A  LS G      +  EI+ TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    L      G  +NPA S G A++     +W +HW++WVGPLIG  +A   +++
Sbjct:   34 ELTKWSLYRAVIAEFVATLLFLYITVATVIGYKHQSDPGANAADAACSGVGILGIAWAFGGMIFILVYCTAGVSGGHINPAVTFGLFLARKVSLVRAVLYIVAQSLGAICGVGLVKGFQSAFYVRYG--GGANELSDGYSKGTGLAAEIIGTFVLVYTVF-SATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNQHKAWHDHWIFWVGPLIGAAIAAAYHQY 273          
The following BLAST results are available for this feature:
BLAST of CK936483 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 193
Match NameE-valueIdentityDescription
AQP_HAEIX2.148e-2638.18Aquaporin OS=Haematobia irritans exigua PE=2 SV=1[more]
AQP8_MOUSE2.148e-2640.74Aquaporin-8 OS=Mus musculus GN=Aqp8 PE=2 SV=1[more]
AQP5_PIG2.148e-2633.48Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1[more]
PIP25_ARATH2.805e-2632.90Probable aquaporin PIP2-5 OS=Arabidopsis thaliana ... [more]
PIP24_MAIZE2.805e-2633.74Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1[more]
PIP22_ARATH2.805e-2639.64Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2... [more]
PIP23_MAIZE3.663e-2633.74Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1[more]
PIP21_ARATH3.663e-2640.83Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1... [more]
PIP23_ARATH4.785e-2639.64Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3... [more]
PIP23_ORYSJ6.249e-2632.51Probable aquaporin PIP2-3 OS=Oryza sativa subsp. j... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004521_H05 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0001_IVF_H05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936483 ID=CK936483; Name=CK936483; organism=Citrus sinensis; type=EST; length=898bp
GGGGACGTGAACCAGTAGTAATCACACCCCAAAGGTTCAATCTTCATCGT
TTGTTCTCCATCATGCCGATCAGAAACATTGCCGTTGGCCATCCCCGTGA
GGCGACTCACCCAGATGCCCTAAGGGCAGCCCTAGCAGAGTTCATCTCAA
CTCTAATATCTGTCTTTGCCGGTGAAGGCTCGGGCATGGCCTTCAACAAG
CTCACTCACAACGGCGCCAATACCCCCTCCGGCCTCGTCGCCGCCTCTGT
TGCTCACGCTTTCGCCCTTTTCGTTGCTGTCGCCGTTGGCGCCAACATTT
CCGGTGGCCACGTTAATCCTGCTGTCACCTTTGGCGCCTTCGTTGGAGGT
AACATCTCCCTTCTACGTGGCATCCTCTACTGGATCGCCCAGCTTCTTGG
ATCCACCGTCGCATGCTTGCTTCTTAAGTTCGTTACCAACGGCCAGACCA
CATCTGCTTTTGCTCTCTCATCTGGAGTTGGTGCATGGAACGCAGTCGTT
TTCGAGATCGTGATGACATTCGGACTAGTGTACACAGTGTATGCCACAGC
CCTGGACCCAAAGAAGGGAAGCTTGGGGACAATTGCACCAATTGCAATTG
GTTTCATTGTAGGAGCCAACATCTTGGTGGGCGGGGCGTTTGATGGAGCT
TCAATGAACCCAGCAGTGTCATTCGGGCCAGCTTTGGTGAGCTGGAGCTG
GGACAACCACTGGGTCTACTGGGTCGGGCCACTCATCGGTGGTGGGCTAG
CTGGCATCGTCTACGAGTTCTTCTTCATTAACCAGTCGCATGAGCAGCTC
CCAACAACCGAGTACTAAGCTAAAAGCTTGCCATCTATGTGAGTTTGCAC
GGATGTTGTATTTAATTTGCTTTTACCGAGGTTCTTTCTTTTTATTTT
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