CK936480

Overview
NameCK936480
Unique NameCK936480
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length578
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2171 contig Csv1_Contig2171:79..650. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK936480 vs. ExPASy Swiss-Prot
Match: CYC_APIME (Cytochrome c OS=Apis mellifera GN=cytC PE=1 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 5.001e-31
Identity = 58/93 (62.37%), Postives = 74/93 (79.57%), Query Frame = 2
Query:    5 FKTKCAQCHTVVKGAGHKQGPNLNGLFGRQSGTTPRYSYSAANKGMAVIWEEKTLYNYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKEST 283
            F  KCAQCHT+  G  HK GPNL G++GR++G  P YSY+ ANKG  + W ++TL+ YL NPKKYIPGTKMVF GLKKPQ+RADLIAY+++++
Sbjct:   15 FVQKCAQCHTIESGGKHKVGPNLYGVYGRKTGQAPGYSYTDANKGKGITWNKETLFEYLENPKKYIPGTKMVFAGLKKPQERADLIAYIEQAS 107          
BLAST of CK936480 vs. ExPASy Swiss-Prot
Match: CYC_MACGI (Cytochrome c OS=Macropus giganteus GN=CYCS PE=1 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 8.531e-31
Identity = 60/93 (64.52%), Postives = 72/93 (77.42%), Query Frame = 2
Query:    5 FKTKCAQCHTVVKGAGHKQGPNLNGLFGRQSGTTPRYSYSAANKGMAVIWEEKTLYNYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKEST 283
            F  KCAQCHTV KG  HK GPNLNG+FGR++G  P ++Y+ ANK   +IW E TL  YL NPKKYIPGTKM+F G+KK  +RADLIAYLK++T
Sbjct:   11 FVQKCAQCHTVEKGGKHKTGPNLNGIFGRKTGQAPGFTYTDANKNKGIIWGEDTLMEYLENPKKYIPGTKMIFAGIKKKGERADLIAYLKKAT 103          
BLAST of CK936480 vs. ExPASy Swiss-Prot
Match: CYC_HIPAM (Cytochrome c OS=Hippopotamus amphibius GN=CYCS PE=1 SV=2)

HSP 1 Score: 132.88 bits (333), Expect = 1.114e-30
Identity = 60/93 (64.52%), Postives = 73/93 (78.49%), Query Frame = 2
Query:    5 FKTKCAQCHTVVKGAGHKQGPNLNGLFGRQSGTTPRYSYSAANKGMAVIWEEKTLYNYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKEST 283
            F  KCAQCHTV KG  HK GPNL+GLFGR++G +P +SY+ ANK   + W E+TL  YL NPKKYIPGTKM+F G+KK  +RADLIAYLK++T
Sbjct:   11 FVQKCAQCHTVEKGGKHKTGPNLHGLFGRKTGQSPGFSYTDANKNKGITWGEETLMEYLENPKKYIPGTKMIFAGIKKKGERADLIAYLKQAT 103          
BLAST of CK936480 vs. ExPASy Swiss-Prot
Match: CYC_THEPA (Cytochrome c OS=Theileria parva GN=TP02_0396 PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.455e-30
Identity = 61/94 (64.89%), Postives = 76/94 (80.85%), Query Frame = 2
Query:    5 FKTKCAQCHTVVKGAGHKQGPNLNGLFGRQSGTTPRYSYSAANKGMAVIWEEKTLYNYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 286
            FK+KCAQCHT+ KG   KQGPNL G +GR+SG +  Y+YS ANK   ++W +K L+ YL+NPK+YIPGTKMVF GLKK QDRADLIAYLKE+++
Sbjct:   22 FKSKCAQCHTINKGGSVKQGPNLYGFYGRKSGASD-YAYSDANKNSGIVWSDKHLFVYLVNPKQYIPGTKMVFAGLKKEQDRADLIAYLKEASS 114          
BLAST of CK936480 vs. ExPASy Swiss-Prot
Match: CYC_ALLMI (Cytochrome c OS=Alligator mississippiensis PE=1 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 1.455e-30
Identity = 60/94 (63.83%), Postives = 72/94 (76.60%), Query Frame = 2
Query:    5 FKTKCAQCHTVVKGAGHKQGPNLNGLFGRQSGTTPRYSYSAANKGMAVIWEEKTLYNYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 286
            F  KCAQCHTV KG  HK GPNL+GL GR++G  P +SY+ ANK   + W E+TL  YL NPKKYIPGTKM+F G+KK  +RADLIAYLKE+T+
Sbjct:   11 FVQKCAQCHTVEKGGKHKTGPNLHGLIGRKTGQAPGFSYTEANKNKGITWGEETLMEYLENPKKYIPGTKMIFAGIKKKPERADLIAYLKEATS 104          
BLAST of CK936480 vs. ExPASy Swiss-Prot
Match: CYC_CANFA (Cytochrome c OS=Canis familiaris GN=CYCS PE=1 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 1.901e-30
Identity = 60/93 (64.52%), Postives = 72/93 (77.42%), Query Frame = 2
Query:    5 FKTKCAQCHTVVKGAGHKQGPNLNGLFGRQSGTTPRYSYSAANKGMAVIWEEKTLYNYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKEST 283
            F  KCAQCHTV KG  HK GPNL+GLFGR++G  P +SY+ ANK   + W E+TL  YL NPKKYIPGTKM+F G+KK  +RADLIAYLK++T
Sbjct:   11 FVQKCAQCHTVEKGGKHKTGPNLHGLFGRKTGQAPGFSYTDANKNKGITWGEETLMEYLENPKKYIPGTKMIFAGIKKTGERADLIAYLKKAT 103          
BLAST of CK936480 vs. ExPASy Swiss-Prot
Match: CYC_MINSC (Cytochrome c OS=Miniopterus schreibersi GN=CYCS PE=1 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 2.482e-30
Identity = 60/93 (64.52%), Postives = 71/93 (76.34%), Query Frame = 2
Query:    5 FKTKCAQCHTVVKGAGHKQGPNLNGLFGRQSGTTPRYSYSAANKGMAVIWEEKTLYNYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKEST 283
            F  KCAQCHTV KG  HK GPNL+GLFGR++G  P +SY+ ANK   + W E TL  YL NPKKYIPGTKM+F G+KK  +RADLIAYLK++T
Sbjct:   11 FVQKCAQCHTVEKGGKHKTGPNLHGLFGRKTGQAPGFSYTDANKNKGITWGEATLMEYLENPKKYIPGTKMIFAGIKKSAERADLIAYLKKAT 103          
BLAST of CK936480 vs. ExPASy Swiss-Prot
Match: CYC_EQUBU (Cytochrome c OS=Equus burchelli GN=CYCS PE=1 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 2.482e-30
Identity = 59/93 (63.44%), Postives = 72/93 (77.42%), Query Frame = 2
Query:    5 FKTKCAQCHTVVKGAGHKQGPNLNGLFGRQSGTTPRYSYSAANKGMAVIWEEKTLYNYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKEST 283
            F  KCAQCHTV KG  HK GPNL+GLFGR++G  P +SY+ ANK   + W+E+TL  YL NPKKYIPGTKM+F G+KK  +R DLIAYLK++T
Sbjct:   11 FVQKCAQCHTVEKGGKHKTGPNLHGLFGRKTGQAPGFSYTDANKNKGITWKEETLMEYLENPKKYIPGTKMIFAGIKKKTEREDLIAYLKKAT 103          
BLAST of CK936480 vs. ExPASy Swiss-Prot
Match: CYC_EQUAS (Cytochrome c OS=Equus asinus GN=CYCS PE=1 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 2.482e-30
Identity = 59/93 (63.44%), Postives = 72/93 (77.42%), Query Frame = 2
Query:    5 FKTKCAQCHTVVKGAGHKQGPNLNGLFGRQSGTTPRYSYSAANKGMAVIWEEKTLYNYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKEST 283
            F  KCAQCHTV KG  HK GPNL+GLFGR++G  P +SY+ ANK   + W+E+TL  YL NPKKYIPGTKM+F G+KK  +R DLIAYLK++T
Sbjct:   11 FVQKCAQCHTVEKGGKHKTGPNLHGLFGRKTGQAPGFSYTDANKNKGITWKEETLMEYLENPKKYIPGTKMIFAGIKKKTEREDLIAYLKKAT 103          
BLAST of CK936480 vs. ExPASy Swiss-Prot
Match: CYC_CANAL (Cytochrome c OS=Candida albicans GN=CYC1 PE=3 SV=3)

HSP 1 Score: 131.724 bits (330), Expect = 2.482e-30
Identity = 60/94 (63.83%), Postives = 73/94 (77.66%), Query Frame = 2
Query:    5 FKTKCAQCHTVVKGAGHKQGPNLNGLFGRQSGTTPRYSYSAANKGMAVIWEEKTLYNYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 286
            FKT+C QCHTV KG  HK GPNL+G+FGR+SG    YSY+ ANK   V W E+T+ +YL NPKKYIPGTKM F GLKKP+DR DL+ YLK++T+
Sbjct:   17 FKTRCLQCHTVEKGGPHKVGPNLHGVFGRKSGLAEGYSYTDANKKKGVEWTEQTMSDYLENPKKYIPGTKMAFGGLKKPKDRNDLVTYLKKATS 110          
The following BLAST results are available for this feature:
BLAST of CK936480 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 170
Match NameE-valueIdentityDescription
CYC_APIME5.001e-3162.37Cytochrome c OS=Apis mellifera GN=cytC PE=1 SV=2[more]
CYC_MACGI8.531e-3164.52Cytochrome c OS=Macropus giganteus GN=CYCS PE=1 SV... [more]
CYC_HIPAM1.114e-3064.52Cytochrome c OS=Hippopotamus amphibius GN=CYCS PE=... [more]
CYC_THEPA1.455e-3064.89Cytochrome c OS=Theileria parva GN=TP02_0396 PE=3 ... [more]
CYC_ALLMI1.455e-3063.83Cytochrome c OS=Alligator mississippiensis PE=1 SV... [more]
CYC_CANFA1.901e-3064.52Cytochrome c OS=Canis familiaris GN=CYCS PE=1 SV=2[more]
CYC_MINSC2.482e-3064.52Cytochrome c OS=Miniopterus schreibersi GN=CYCS PE... [more]
CYC_EQUBU2.482e-3063.44Cytochrome c OS=Equus burchelli GN=CYCS PE=1 SV=2[more]
CYC_EQUAS2.482e-3063.44Cytochrome c OS=Equus asinus GN=CYCS PE=1 SV=2[more]
CYC_CANAL2.482e-3063.83Cytochrome c OS=Candida albicans GN=CYC1 PE=3 SV=3[more]

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Properties
Property NameValue
Genbank descriptionCGF1004521_H02 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0001_IVF_H02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936480 ID=CK936480; Name=CK936480; organism=Citrus sinensis; type=EST; length=578bp
GGGCTTCAAGACCAAGTGCGCTCAGTGCCACACCGTCGTGAAAGGCGCTG
GTCACAAACAAGGACCAAATTTGAATGGACTTTTCGGGAGACAGTCCGGG
ACAACTCCCAGGTACTCCTATTCAGCTGCTAACAAGGGTATGGCTGTTAT
TTGGGAAGAGAAAACGTTGTACAATTACTTGCTTAACCCCAAGAAGTATA
TTCCTGGAACAAAGATGGTCTTCCCTGGATTGAAGAAGCCTCAGGATCGT
GCAGACCTCATTGCCTATTTGAAGGAGTCAACAGCCTGATTTTTGCTTAG
TGTGGGCTATTTTGCAACCATGGGAAGAGTATGGTCCCTGATGATTCAAT
AATTTTTTGTTTTTGGAAGAAAAAATGTTGTTCAAATGAGAATGTTCAAA
ATGTTTTACTCTTTTTAGCCATAGACAATTGGATAAAATGTTCTTCCAAA
GAAACTTTTCTTTGAGAGGCATTTCGCAAATTTTGATGATTTCTAAGCGC
TATGTATCCTAATTTTGCCACTTAATTTGTTATAATGGAATTTTAAGTTC
AAAAAAAAAAAAAAAAAAAAAAAAAAAA
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