CN186762

Overview
NameCN186762
Unique NameCN186762
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length709
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186762 vs. ExPASy Swiss-Prot
Match: 6PGL_CHLPN (6-phosphogluconolactonase OS=Chlamydia pneumoniae GN=pgl PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.864e-13
Identity = 55/176 (31.25%), Postives = 90/176 (51.14%), Query Frame = 1
Query:  151 DYIADLSEASVKERGVFAIALSGGSLIGLMGKLCEAPYNKTVDWAKWYIFWADERVVAKNHADSNYKLAKEGLLSKVPIVPSHVHSINDSLSAEEAGDEYEFDIRQLVKARMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHSVLDVKNQWVSFITDSPKPPPERITFTLPVIN 678
            D+IA  ++A +K+RG F +ALSGG     + K      +K +D +K ++FW DER+     ++SNY  A   +L  + I    +  +       +   +Y+    +L++ ++   S       FD+I+LG+G DGH  SLF N S L+ +N  V F    P    ER+T T P ++
Sbjct:   29 DWIASANQA-IKQRGAFYVALSGGKTPLEIYKDIVINKDKLIDPSKIFLFWGDERLAPITSSESNYGQAMS-ILRDLNIPDEQIFRMETE--NPDGAKKYQ----ELIENKIPDAS-------FDMIMLGLGEDGHTLSLFSNTSALEEENDLVVF-NSVPHLETERMTLTFPCVH 188          
BLAST of CN186762 vs. ExPASy Swiss-Prot
Match: 6PGL_CHLTR (6-phosphogluconolactonase OS=Chlamydia trachomatis GN=pgl PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.082e-13
Identity = 61/199 (30.65%), Postives = 97/199 (48.74%), Query Frame = 1
Query:   94 DRGELRIHESVEE-LSTNLADYIADLSEASVKERGVFAIALSGGSLIGLMGKLCEAPYNKTVDWAKWYIFWADERVVAKNHADSNYKLAKEGLLSKVPIVPSHVHSINDSLSAEEAGDE-YEFDIRQLVKARMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHSVLDVKNQWVSFITDSPKPPPERITFTLPVINSA 684
            D   + I +S EE L     D+I+  ++A + +RG F +ALSGG     + +          D +K  +FW DER      A SNY  A + +L  + I    +  ++   +A+  GDE YE  I++ V   +           FD+++LG+G DGH  SLFP    L+ K ++V F  + P+    R+T T P++  A
Sbjct:    9 DANRMLIADSQEEFLQIACYDWISTANKA-IHKRGAFYVALSGGKTPLQIFQEIVKKRAAISDCSKIVVFWGDERANEDVEAGSNYLKAMD-ILKGLRIPEDQIFRMD---TADPKGDEAYEALIQKYVPDAI-----------FDMVMLGVGEDGHTLSLFPETHALEEKERFVVF-NEVPQLHTRRMTLTFPIVRQA 190          
BLAST of CN186762 vs. ExPASy Swiss-Prot
Match: 6PGL_NEIMB (6-phosphogluconolactonase OS=Neisseria meningitidis serogroup B GN=pgl PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.250e-13
Identity = 57/192 (29.69%), Postives = 87/192 (45.31%), Query Frame = 1
Query:  115 HESVEELSTNLADYIADLSEASVKERGVFAIALSGG-SLIGLMGKLCEAPYNKTVDWAKWYIFWADERVVAKNHADSNYKLAKEGLLSKVPIVPSHVHSINDSLSAEEAGDEYEFDIRQLVKARMVCVSDISDCPKFDLILLGMGSDGHVASLFPN----HSVLDVKNQWVSFITDSPKPPPERITFTLPVI 675
            +E+  E + +LAD +AD  + ++ E+G   +A+SGG S I     L +    K +DW    I  ADER+V   HADSN  L +E LL         +  + D  +  E   +   D              +    + D+++LGMG+DGH AS+FP      + +D         T     P ER++ TL  I
Sbjct:    7 YENAAEAAQSLADAVADALQGALDEKGGAVLAVSGGRSPIAFFNALSQ----KDLDWKNVGITLADERIVPTVHADSNTGLVREYLLKNKAEAAMWIPMVEDGKTETELHPDAVVDYA------------LKHYKQPDVLVLGMGNDGHTASIFPKAPQFQTAIDGSAGVALVHTTPVTAPHERVSMTLDAI 182          
BLAST of CN186762 vs. ExPASy Swiss-Prot
Match: 6PGL_NEIMA (6-phosphogluconolactonase OS=Neisseria meningitidis serogroup A GN=pgl PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.250e-13
Identity = 57/192 (29.69%), Postives = 87/192 (45.31%), Query Frame = 1
Query:  115 HESVEELSTNLADYIADLSEASVKERGVFAIALSGG-SLIGLMGKLCEAPYNKTVDWAKWYIFWADERVVAKNHADSNYKLAKEGLLSKVPIVPSHVHSINDSLSAEEAGDEYEFDIRQLVKARMVCVSDISDCPKFDLILLGMGSDGHVASLFPN----HSVLDVKNQWVSFITDSPKPPPERITFTLPVI 675
            +E+  E + +LAD +AD  + ++ E+G   +A+SGG S I     L +    K +DW    I  ADER+V   HADSN  L +E LL         +  + D  +  E   +   D              +    + D+++LGMG+DGH AS+FP      + +D         T     P ER++ TL  I
Sbjct:    7 YENAAEAAQSLADAVADALQGALDEKGGAVLAVSGGRSPIAFFNALSQ----KDLDWKNVGITLADERIVPTVHADSNTGLVREYLLKNKAEAAMWIPMVEDGKTETELHPDAVVDYA------------LKHYKQPDVLVLGMGNDGHTASIFPKAPQFQTAIDGSAGVALVHTTPVTAPHERVSMTLDAI 182          
BLAST of CN186762 vs. ExPASy Swiss-Prot
Match: 6PGL_DICDI (Probable 6-phosphogluconolactonase OS=Dictyostelium discoideum GN=pgl PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.250e-13
Identity = 47/156 (30.13%), Postives = 78/156 (50.00%), Query Frame = 1
Query:  127 EELSTNLADYIADLSEASVKERGVFAIALSGGS----LIGLMGKLCEAPYNKTVDWAKWYIFWADERVVAKNHADSNYKLAKEGLL-SKVPIVPSHVHSINDSLSAEEAGDEYEFDIRQLVKARMVCVSDISDCPKFDLILLGMGSDGHVASLFPN 579
            E        +I ++   S+  R +  I LSGGS    +  ++G       + ++DW K Y F  DER + K+  DS Y L  + +  ++  ++  H  + N SL  +E  + Y  D+++L++         +  P  DL+ LGMG DGH+AS+FPN
Sbjct:   14 ERFEDECVKFIKNVITDSINSRNIATIGLSGGSTPKPIYEMLGN------DSSIDWTKVYFFAVDERYIDKSSKDSIYDLISKSVFKNRENLLVDHFITPNTSLPLKECIETYSNDLKKLIEKS-------NGSP--DLVTLGMGEDGHIASIFPN 154          
BLAST of CN186762 vs. ExPASy Swiss-Prot
Match: 6PGL_PSEAE (6-phosphogluconolactonase OS=Pseudomonas aeruginosa GN=pgl PE=3 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.691e-12
Identity = 57/200 (28.50%), Postives = 93/200 (46.50%), Query Frame = 1
Query:  106 LRIHESVEELSTNLADYIADLSEASVKERGVFAIALSGG-SLIGLMGKLCEAPYNKTVDWAKWYIFWADERVVAKNHADSNYKLAKEGLLSKVPIVPSHVHSINDSLSAEEAGDEYEFDIRQLVKARMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHSVLDV----KNQWVSFITDSPKPPPERITFTLPVINSASI 690
            L++  S  E +  LA  +A    +++ E+G   + +SGG S +  +  L E P    +DW++  +  ADER V ++HADSN  L +  LL         +     + S EEA +  +  + +L                 D+++LGMG DGH ASLFPN   LD+    +         +P  P +R+T    V+ +A +
Sbjct:   14 LQVWGSAAEQARGLAAEVAGRLRSALAEQGQALLVVSGGRSPVAFLEALSEEP----LDWSRITVSLADERWVPESHADSNAGLVRRHLLRGEAAKARFIGLYQPAASLEEAAELADHHLHELPLP-------------IDVLVLGMGDDGHTASLFPNSPGLDLAMDPQGTRRCLPMWAPSVPHQRLTLPRAVLAAAKV 196          
BLAST of CN186762 vs. ExPASy Swiss-Prot
Match: 6PGL_PSEPU (6-phosphogluconolactonase OS=Pseudomonas putida GN=pgl PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.591e-12
Identity = 59/201 (29.35%), Postives = 96/201 (47.76%), Query Frame = 1
Query:  106 LRIHE--SVEELSTNLADYIADLSEASVKERGVFAIALSGG-SLIGLMGKLCEAPYNKTVDWAKWYIFWADERVVAKNHADSNYKLAKEGLLSKVPIVPSHVHSINDSLSAEEAGDEYEFDIRQLVKARMVCVSDISDCPKFDLILLGMGSDGHVASLFPN----HSVLDVKNQWVSFITDSPKPPPERITFTLPVINSAS 687
            +++HE    + L+  LA  +A+   A++  +G   + LSGG S +  + KL   P    +DWAK  +  ADER V   HADSN      GLL++        H +  + +       Y+     L  A +     ++  P  D+++LGMG DGH ASLFP      + LD+ +        +P  P +R++ T  ++ SA+
Sbjct:   17 VKVHELADAKTLAATLAHDVAERLRAAIAAKGQACVVLSGGRSPVPFLEKLASEP----LDWAKVTVSLADERWVPVEHADSN-----AGLLAR--------HLLTGAAAKARFVGLYQ-QAENLDAAALKADQALTGLPPIDVLVLGMGDDGHTASLFPASPNLEAGLDLASTRRCLPLLAPSVPHQRLSMTRSLLASAA 199          
The following BLAST results are available for this feature:
BLAST of CN186762 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
6PGL_CHLPN1.864e-1331.256-phosphogluconolactonase OS=Chlamydia pneumoniae ... [more]
6PGL_CHLTR7.082e-1330.656-phosphogluconolactonase OS=Chlamydia trachomatis... [more]
6PGL_NEIMB9.250e-1329.696-phosphogluconolactonase OS=Neisseria meningitidi... [more]
6PGL_NEIMA9.250e-1329.696-phosphogluconolactonase OS=Neisseria meningitidi... [more]
6PGL_DICDI9.250e-1330.13Probable 6-phosphogluconolactonase OS=Dictyosteliu... [more]
6PGL_PSEAE2.691e-1228.506-phosphogluconolactonase OS=Pseudomonas aeruginos... [more]
6PGL_PSEPU4.591e-1229.356-phosphogluconolactonase OS=Pseudomonas putida GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0003G09_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0003G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186762 ID=CN186762; Name=CN186762; organism=Citrus sinensis; type=EST; length=709bp
AGTCTTCTCTTTGCCACCTATCATCTTCTTTCCTTTTCTTTTTTTTTTAG
TTGATAGCTTGTTGAAAGCATGGCTTTTTCTGGGGTTCATAGAGATAGAG
GGGAGTTGAGGATTCATGAGAGTGTGGAGGAGCTTAGCACCAATTTGGCA
GACTATATTGCTGATTTGTCAGAGGCATCAGTGAAAGAGCGTGGTGTCTT
TGCCATTGCCTTATCTGGTGGTTCCCTCATTGGCTTAATGGGGAAACTCT
GTGAAGCTCCTTATAACAAGACTGTTGACTGGGCTAAATGGTATATATTC
TGGGCAGACGAACGCGTAGTGGCAAAAAATCATGCTGATAGCAATTATAA
GCTTGCAAAGGAAGGCCTTTTGTCCAAGGTTCCGATAGTTCCCAGTCACG
TACATTCCATTAATGATTCATTGTCAGCAGAGGAGGCTGGTGATGAGTAT
GAGTTTGACATCCGACAGCTGGTGAAAGCCCGGATGGTCTGTGTCTCTGA
TATTAGTGACTGCCCCAAATTTGACCTCATTCTTCTTGGAATGGGCTCTG
ATGGCCATGTTGCCTCACTGTTCCCTAACCATTCGGTGCTTGATGTGAAA
AATCAGTGGGTAAGCTTTATCACTGATTCGCCTAAACCCCCACCAGAGAG
GATCACATTCACTTTGCCTGTCATCAACTCAGCATCCATTGTAGTTGTGG
TCGTGACAG
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