CN186748
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186748 vs. ExPASy Swiss-Prot
Match: UB2D1_BOVIN (Ubiquitin-conjugating enzyme E2 D1 OS=Bos taurus GN=UBE2D1 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 7.609e-21 Identity = 47/119 (39.50%), Postives = 68/119 (57.14%), Query Frame = 3 Query: 150 NLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 506 +L W TI G + ++GG F LT+HF DYP KPPK F +HPN+ +G++CL IL W PA+TV ++L+ I LL PNP DP + ++ D +Y R R+ ++Y Sbjct: 29 DLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINSNGSICLDILRSQ--WSPALTVSKVLLSICSLLCDPNPDDPLVPDIAQIYKSDKEKYNRHAREWTQKY 145
BLAST of CN186748 vs. ExPASy Swiss-Prot
Match: UBC4_YEAST (Ubiquitin-conjugating enzyme E2 4 OS=Saccharomyces cerevisiae GN=UBC4 PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 9.938e-21 Identity = 52/148 (35.14%), Postives = 78/148 (52.70%), Query Frame = 3 Query: 63 RLAEERKSWRKNHPHGFVAKPETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 506 R+A+E ++ P A P +L W +I G A + + GG F L++HF DYP KPPK F +HPN+ +G +CL IL + W PA+T+ ++L+ I LL NP DP E H++ D +Y+ R+ K+Y Sbjct: 6 RIAKELSDLERDPPTSCSAGPV-----GDDLYHWQASIMGPADSPYAGGVFFLSIHFPTDYPFKPPKISFTTKIYHPNINANGNICLDILKDQ--WSPALTLSKVLLSICSLLTDANPDDPLVPEIAHIYKTDRPKYEATAREWTKKY 146
BLAST of CN186748 vs. ExPASy Swiss-Prot
Match: UBC12_ARATH (Probable ubiquitin-conjugating enzyme E2 12 OS=Arabidopsis thaliana GN=UBC12 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.298e-20 Identity = 52/152 (34.21%), Postives = 80/152 (52.63%), Query Frame = 3 Query: 51 IARGRLAEERKSWRKNHPHGFVAKPETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 506 +A R++ E + +++ P A P D + W TI G + + GG F +++ FS DYP KPPK F +HPN+ G++CL IL E W PA T ++L+ I LL PNP DP E HL+ D ++Y+ ++ ++Y Sbjct: 1 MASKRISRELRDMQRHPPANCSAGPVAEED----IFHWQATIMGPHDSPYSGGVFTVSIDFSSDYPFKPPKVNFKTKVYHPNIDSKGSICLDILKEQ--WSPAPTTSKVLLSICSLLTDPNPNDPLVPEIAHLYKVDKSKYESTAQKWTQKY 146
BLAST of CN186748 vs. ExPASy Swiss-Prot
Match: UBCD1_DROME (Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster GN=eff PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.695e-20 Identity = 46/119 (38.66%), Postives = 67/119 (56.30%), Query Frame = 3 Query: 150 NLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 506 +L W TI G + ++GG F LT+HF DYP KPPK F +HPN+ +G++CL IL W PA+T+ ++L+ I LL PNP DP E ++ D +Y R+ ++Y Sbjct: 29 DLFHWQATIMGPPDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQ--WSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREWTRKY 145
BLAST of CN186748 vs. ExPASy Swiss-Prot
Match: UB2D2_XENLA (Ubiquitin-conjugating enzyme E2 D2 OS=Xenopus laevis GN=ube2d2 PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.695e-20 Identity = 46/115 (40.00%), Postives = 66/115 (57.39%), Query Frame = 3 Query: 162 WHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 506 W TI G + ++GG F LT+HF DYP KPPK F +HPN+ +G++CL IL W PA+T+ ++L+ I LL PNP DP E ++ D +Y R R+ ++Y Sbjct: 33 WQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQ--WSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKY 145
BLAST of CN186748 vs. ExPASy Swiss-Prot
Match: UB2D2_RAT (Ubiquitin-conjugating enzyme E2 D2 OS=Rattus norvegicus GN=Ube2d2 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.695e-20 Identity = 46/115 (40.00%), Postives = 66/115 (57.39%), Query Frame = 3 Query: 162 WHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 506 W TI G + ++GG F LT+HF DYP KPPK F +HPN+ +G++CL IL W PA+T+ ++L+ I LL PNP DP E ++ D +Y R R+ ++Y Sbjct: 33 WQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQ--WSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKY 145
BLAST of CN186748 vs. ExPASy Swiss-Prot
Match: UB2D2_MOUSE (Ubiquitin-conjugating enzyme E2 D2 OS=Mus musculus GN=Ube2d2 PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.695e-20 Identity = 46/115 (40.00%), Postives = 66/115 (57.39%), Query Frame = 3 Query: 162 WHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 506 W TI G + ++GG F LT+HF DYP KPPK F +HPN+ +G++CL IL W PA+T+ ++L+ I LL PNP DP E ++ D +Y R R+ ++Y Sbjct: 33 WQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQ--WSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKY 145
BLAST of CN186748 vs. ExPASy Swiss-Prot
Match: UB2D2_HUMAN (Ubiquitin-conjugating enzyme E2 D2 OS=Homo sapiens GN=UBE2D2 PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.695e-20 Identity = 46/115 (40.00%), Postives = 66/115 (57.39%), Query Frame = 3 Query: 162 WHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 506 W TI G + ++GG F LT+HF DYP KPPK F +HPN+ +G++CL IL W PA+T+ ++L+ I LL PNP DP E ++ D +Y R R+ ++Y Sbjct: 33 WQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQ--WSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKY 145
BLAST of CN186748 vs. ExPASy Swiss-Prot
Match: UB2D2_BOVIN (Ubiquitin-conjugating enzyme E2 D2 OS=Bos taurus GN=UBE2D2 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.695e-20 Identity = 46/115 (40.00%), Postives = 66/115 (57.39%), Query Frame = 3 Query: 162 WHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 506 W TI G + ++GG F LT+HF DYP KPPK F +HPN+ +G++CL IL W PA+T+ ++L+ I LL PNP DP E ++ D +Y R R+ ++Y Sbjct: 33 WQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQ--WSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKY 145
BLAST of CN186748 vs. ExPASy Swiss-Prot
Match: UBC2_CAEEL (Ubiquitin-conjugating enzyme E2 2 OS=Caenorhabditis elegans GN=let-70 PE=1 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.892e-20 Identity = 46/119 (38.66%), Postives = 67/119 (56.30%), Query Frame = 3 Query: 150 NLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 506 +L W TI G + ++GG F LT+HF DYP KPPK F +HPN+ +G++CL IL W PA+T+ ++L+ I LL PNP DP E ++ D Y + R+ ++Y Sbjct: 29 DLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQ--WSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRERYNQLAREWTQKY 145 The following BLAST results are available for this feature:
BLAST of CN186748 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 220
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186748 ID=CN186748; Name=CN186748; organism=Citrus sinensis; type=EST; length=641bpback to top |