CN186744
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186744 vs. ExPASy Swiss-Prot
Match: GATA_HELPH (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Helicobacter pylori (strain HPAG1) GN=gatA PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.129e-13 Identity = 52/138 (37.68%), Postives = 72/138 (52.17%), Query Frame = 2 Query: 107 MVTVSLGSETHGSILCPADRNSVVGLKPTVGLTSRAGVIPVLPQHDTIGAISRTVSDAVYLLDVIVGFDSRDYEATSEAARYIPVGGYKQFLNENGLKGKRLGVVRNLFSNALNGSTVITAFENHLNTLRQSGATIVD 520 + +LGS+T GSI PA VGLKPT G SR G+I D IG I++ V DA L D I G D++D S +A P + F N N K ++ ++R+ +A N V A+EN L L++ G IV+ Sbjct: 140 LAVAALGSDTGGSIRQPASYCGCVGLKPTYGRVSRYGLIAYCSSFDQIGPITQNVEDASILFDAISGHDNKD----STSANLKPT---QTFKNLNRDKRFKIAILRDHIKDASN--EVQLAYENTLKALKEMGHEIVE 268
BLAST of CN186744 vs. ExPASy Swiss-Prot
Match: GATA_HELPG (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Helicobacter pylori (strain G27) GN=gatA PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.129e-13 Identity = 52/138 (37.68%), Postives = 72/138 (52.17%), Query Frame = 2 Query: 107 MVTVSLGSETHGSILCPADRNSVVGLKPTVGLTSRAGVIPVLPQHDTIGAISRTVSDAVYLLDVIVGFDSRDYEATSEAARYIPVGGYKQFLNENGLKGKRLGVVRNLFSNALNGSTVITAFENHLNTLRQSGATIVD 520 + +LGS+T GSI PA VGLKPT G SR G+I D IG I++ V DA L D I G D++D S +A P + F N N K ++ ++R+ +A S V A+EN L L++ G IV+ Sbjct: 140 LAVAALGSDTGGSIRQPASYCGCVGLKPTYGRVSRYGLIAYCSSFDQIGPITQNVEDASILFDAISGHDNKD----STSANLKPT---QTFKNLNKDKRFKIAILRDHIKDA--SSEVQLAYENTLKALKEMGHEIVE 268
BLAST of CN186744 vs. ExPASy Swiss-Prot
Match: GATA_HELP2 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Helicobacter pylori (strain P12) GN=gatA PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.129e-13 Identity = 52/138 (37.68%), Postives = 72/138 (52.17%), Query Frame = 2 Query: 107 MVTVSLGSETHGSILCPADRNSVVGLKPTVGLTSRAGVIPVLPQHDTIGAISRTVSDAVYLLDVIVGFDSRDYEATSEAARYIPVGGYKQFLNENGLKGKRLGVVRNLFSNALNGSTVITAFENHLNTLRQSGATIVD 520 + +LGS+T GSI PA VGLKPT G SR G+I D IG I++ V DA L D I G D++D S +A P + F N N K ++ ++R+ +A N V A+EN L L++ G IV+ Sbjct: 140 LAVAALGSDTGGSIRQPASYCGCVGLKPTYGRVSRYGLIAYCSSFDQIGPITQNVEDASILFDAISGHDNKD----STSANLKPT---QTFKNLNRDKRFKIAILRDHIKDASN--EVQLAYENTLKALKEMGHEIVE 268
BLAST of CN186744 vs. ExPASy Swiss-Prot
Match: GATA_DEIRA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Deinococcus radiodurans GN=gatA PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.129e-13 Identity = 55/146 (37.67%), Postives = 76/146 (52.05%), Query Frame = 2 Query: 116 VSLGSETHGSILCPADRNSVVGLKPTVGLTSRAGVIPVLPQHDTIGAISRTVSDAVYLLDVIVGFDSRDYEATSEAARYIPVGGYKQFLNENGLKGKRLGVVRNLFSNALNGST--VITAFENHLNTLRQSGATI----VDDLEMA 535 VSLGS+T GS+ PA V G KPT G SR G++ D IG +R+ D L++VI G D RD + AR+ VGG + L+G R+GV+R +L G+T V A L+ LR +GA + + +LE A Sbjct: 165 VSLGSDTGGSVRQPAALCGVYGFKPTYGRVSRYGLVAYASSLDQIGPFARSAEDLALLMNVIAGHDPRDATSLDAPARF-AVGG------ADSLRGLRVGVIR----ESLGGNTPGVEAALGATLDALRGAGAVVGEVSIPELEYA 299
BLAST of CN186744 vs. ExPASy Swiss-Prot
Match: GATA_SYNJB (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Synechococcus sp. GN=gatA PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.005e-13 Identity = 59/184 (32.07%), Postives = 86/184 (46.74%), Query Frame = 2 Query: 104 NMVTVSLGSETHGSILCPADRNSVVGLKPTVGLTSRAGVIPVLPQHDTIGAISRTVSDAVYLLDVIVGFDSRDYEATSEAARYIPVGGYKQFLNENGLKGKRLGVVRNLFSNALNGSTVITAFENHLNTLRQSGATIVD------DLEMANVDVISNPGKSGELTAMLAGFKIALNEYLQELVS 637 + V+LGS+T GSI PA VVGLKPT GL SR G++ D +G RTV D LL I G D D + + + Y Q L + +KG ++GV+R+L G A + + L++ GA I++ +A +I+ P ++ A G K L E L+S Sbjct: 161 DQAVVALGSDTGGSIRQPAAFCGVVGLKPTYGLVSRYGLVAFASSLDQVGPFGRTVEDVALLLQGIAGHDPMD-----STSLKVDIPDYSQALIPD-IKGFKIGVIRDLLGEGC-GEETRAAVQAAIQHLQELGAEILEIDCPSFRYGLATYYIIA-PSEASANLARYDGVKYGLREPADSLLS 336
BLAST of CN186744 vs. ExPASy Swiss-Prot
Match: GATA_METAC (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanosarcina acetivorans GN=gatA PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.005e-13 Identity = 47/142 (33.10%), Postives = 71/142 (50.00%), Query Frame = 2 Query: 119 SLGSETHGSILCPADRNSVVGLKPTVGLTSRAGVIPVLPQHDTIGAISRTVSDAVYLLDVIVGFDSRDYEATSEAARYIPVGGYKQFLNENGLKGKRLGVVRNLFSNALNGSTVITAFENHLNTLRQSGATIVDDLEMANVD 544 +LGS+T GS+ CPA VVGLKPT G SR GV+ + +G ++ V D L+DVI G+D RD + Y Q + +KG ++GV + F ++ V A N ++ GAT ++ M N++ Sbjct: 161 ALGSDTGGSVRCPAAFCGVVGLKPTYGAVSRYGVVAYANSLEQVGPLANNVEDIAILMDVIAGYDRRDSTSIDSKTEY-------QKALVDDVKGLKIGVPKEFFGEGIHPG-VEKAVWNAIHKFESLGAT-RQEVSMPNIN 293
BLAST of CN186744 vs. ExPASy Swiss-Prot
Match: GATA_LACDA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 20081) GN=gatA PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.005e-13 Identity = 50/135 (37.04%), Postives = 71/135 (52.59%), Query Frame = 2 Query: 110 VTVSLGSETHGSILCPADRNSVVGLKPTVGLTSRAGVIPVLPQHDTIGAISRTVSDAVYLLDVIVGFDSRDYEATSEAARYIPVGGYKQFLNENGLKGKRLGVVRNLFSNALNGSTVITAFENHLNTLRQSGATI 514 V +LGS+T GSI PA N + G+KPT G SR G+I D IG +S+ V D+ +L+VI G D RD + + V Y FL ++ +KG R+ V + S+A+ V E + LR +GA I Sbjct: 158 VVAALGSDTGGSIRQPASFNGIFGIKPTYGRVSRWGLIAFASSLDQIGVMSKRVKDSAEVLNVIAGADDRDATVSEK-----EVPDYTSFLGKD-VKGLRVAVPKEYMSDAVE-EGVRKEVEAQIELLRANGAII 285
BLAST of CN186744 vs. ExPASy Swiss-Prot
Match: GATA_DESVV (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=gatA PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.005e-13 Identity = 53/135 (39.26%), Postives = 68/135 (50.37%), Query Frame = 2 Query: 119 SLGSETHGSILCPADRNSVVGLKPTVGLTSRAGVIPVLPQHDTIGAISRTVSDAVYLLDVIVGFDSRDYEATSEAARYIPVGGYKQFL-NENGLKGKRLGVVRNLFSNALNGSTVITAFENHLNTLRQSGATIVD 520 SLG++T GSI PA VGLKPT G SR G+I D IG ++RTV DA ++ VI G D RD PV + L + + L G R+GV + L+ V T+ L+ R GATIVD Sbjct: 169 SLGTDTGGSIRQPASLCGCVGLKPTYGRVSRFGLIAYGSSLDQIGPMTRTVEDAAIVMGVIAGHDKRDSTCADR-----PVEDFAAALASRHDLAGVRIGVPAEFWGEGLS-PEVATSCRAALDAARDLGATIVD 297
BLAST of CN186744 vs. ExPASy Swiss-Prot
Match: GATA_DESVH (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=gatA PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.005e-13 Identity = 53/135 (39.26%), Postives = 68/135 (50.37%), Query Frame = 2 Query: 119 SLGSETHGSILCPADRNSVVGLKPTVGLTSRAGVIPVLPQHDTIGAISRTVSDAVYLLDVIVGFDSRDYEATSEAARYIPVGGYKQFL-NENGLKGKRLGVVRNLFSNALNGSTVITAFENHLNTLRQSGATIVD 520 SLG++T GSI PA VGLKPT G SR G+I D IG ++RTV DA ++ VI G D RD PV + L + + L G R+GV + L+ V T+ L+ R GATIVD Sbjct: 169 SLGTDTGGSIRQPASLCGCVGLKPTYGRVSRYGLIAYGSSLDQIGPMTRTVEDAAIVMGVIAGHDKRDSTCADR-----PVEDFAAALASRHDLAGVRIGVPAEFWGEGLS-PEVATSCRAALDAARDLGATIVD 297
BLAST of CN186744 vs. ExPASy Swiss-Prot
Match: GATA_PROMA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Prochlorococcus marinus GN=gatA PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.045e-12 Identity = 48/138 (34.78%), Postives = 69/138 (50.00%), Query Frame = 2 Query: 107 MVTVSLGSETHGSILCPADRNSVVGLKPTVGLTSRAGVIPVLPQHDTIGAISRTVSDAVYLLDVIVGFDSRDYEATSEAARYIPVGGYKQFLNENGLKGKRLGVVRNLFSNALNGSTVITAFENHLNTLRQSGATIVD 520 + T +LGS+T GSI PA VVGLKPT G SR G+I D +G S VSDA +L VI G D RD +PV Y ++E+ + G R+G+++ F V + + L+ GA +++ Sbjct: 161 LCTAALGSDTGGSIRQPASFCGVVGLKPTYGRVSRWGLIAFASSLDQVGPFSTNVSDAAEILQVIAGHDPRDSTCLD-----VPVPKYSDHISES-ISGLRIGLIKECFDQEGLDLEVKKSVLKAADQLQSLGAELIE 292 The following BLAST results are available for this feature:
BLAST of CN186744 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 264
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN186744 ID=CN186744; Name=CN186744; organism=Citrus sinensis; type=EST; length=656bpback to top |