CK936387

Overview
NameCK936387
Unique NameCK936387
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length840
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936387 vs. ExPASy Swiss-Prot
Match: CYSK2_ORYSJ (Cysteine synthase OS=Oryza sativa subsp. japonica GN=RCS3 PE=2 SV=1)

HSP 1 Score: 320.472 bits (820), Expect = 7.502e-87
Identity = 154/237 (64.98%), Postives = 190/237 (80.17%), Query Frame = 3
Query:  129 IKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGIEPSESAVLNGGQPGKHLIQGIGAGVIPPVLDVAMLD 839
            I  DVT LIG+TP+VYLN VVDGC A+IAAKLE+M+PCSSVKDRI YSMI DAE+KGLITPGK+VLIE TSGNTGIGLAF+AA++GYKLI+ MP++ S+ERRIIL+A GAE+ L DP +G +G ++K +E+  + PN YIL QFENPANP+IHYETTGPEIW  + GKVD                ++LKE+NP IK+YG+EP+ESA+L+GG+PG H IQGIGAG +P VLDV +LD
Sbjct:    8 IASDVTALIGNTPLVYLNKVVDGCEAQIAAKLEIMEPCSSVKDRIGYSMITDAEEKGLITPGKSVLIEPTSGNTGIGLAFMAAAKGYKLILTMPASMSMERRIILKAFGAELVLTDPLLGMKGAIQKADELAAKMPNSYILQQFENPANPKIHYETTGPEIWKATAGKVDILVSGIGTGGTVTGTGKYLKEQNPEIKIYGVEPTESAILSGGRPGPHKIQGIGAGFVPGVLDVNLLD 244          
BLAST of CK936387 vs. ExPASy Swiss-Prot
Match: CYSKP_ARATH (Cysteine synthase, chloroplastic/chromoplastic OS=Arabidopsis thaliana GN=OASB PE=1 SV=2)

HSP 1 Score: 316.235 bits (809), Expect = 1.415e-85
Identity = 150/237 (63.29%), Postives = 187/237 (78.90%), Query Frame = 3
Query:  129 IKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGIEPSESAVLNGGQPGKHLIQGIGAGVIPPVLDVAMLD 839
            I  +  +LIG TPMVYLNNVV GCVA +AAKLE+M+PC SVKDRI YSMI DAE+KGLITPGK+VL+E TSGNTGIGLAFIAAS+GYKLI+ MP++ S+ERR++LRA GAE+ L +PA G  G ++K EEIL +TPN Y+L QF+NPANP+IHYETTGPEIW D+ GK+D                RF+KE+ P +KV G+EP+ESA+L+GG+PG H IQGIGAG +P  LD+A++D
Sbjct:   75 IADNAAQLIGKTPMVYLNNVVKGCVASVAAKLEIMEPCCSVKDRIGYSMITDAEEKGLITPGKSVLVESTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLRAFGAELVLTEPAKGMTGAIQKAEEILKKTPNSYMLQQFDNPANPKIHYETTGPEIWEDTRGKIDILVAGIGTGGTITGVGRFIKERKPELKVIGVEPTESAILSGGKPGPHKIQGIGAGFVPKNLDLAIVD 311          
BLAST of CK936387 vs. ExPASy Swiss-Prot
Match: CYSKP_SPIOL (Cysteine synthase, chloroplastic/chromoplastic OS=Spinacia oleracea GN=CYSK PE=1 SV=2)

HSP 1 Score: 309.301 bits (791), Expect = 1.730e-83
Identity = 149/237 (62.87%), Postives = 185/237 (78.06%), Query Frame = 3
Query:  129 IKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGIEPSESAVLNGGQPGKHLIQGIGAGVIPPVLDVAMLD 839
            I +DV++LIG TPMVYLNNV  G VA IAAKLE M+PC SVKDRI YSMI DAE KG+ITPGKT L+E TSGNTGIGLAFIAA+RGYK+ + MP++ S+ERR+IL+A GAE+ L DPA G +G V+K EEIL +TP+ Y+L QF+NPANP+IHYETTGPEIW D+ GKVD F              R+LKE+NP ++V GIEP+ES +L+GG+PG H IQG+GAG +P  LD+ ++D
Sbjct:   67 IAEDVSQLIGKTPMVYLNNVSKGSVANIAAKLESMEPCCSVKDRIGYSMIDDAEQKGVITPGKTTLVEPTSGNTGIGLAFIAAARGYKITLTMPASMSMERRVILKAFGAELVLTDPAKGMKGAVEKAEEILKKTPDSYMLQQFDNPANPKIHYETTGPEIWEDTKGKVDIFVAGIGTGGTISGVGRYLKERNPGVQVIGIEPTESNILSGGKPGPHKIQGLGAGFVPSNLDLGVMD 303          
BLAST of CK936387 vs. ExPASy Swiss-Prot
Match: CYSKM_ARATH (Cysteine synthase, mitochondrial OS=Arabidopsis thaliana GN=OASC PE=1 SV=3)

HSP 1 Score: 308.531 bits (789), Expect = 2.950e-83
Identity = 149/241 (61.83%), Postives = 185/241 (76.76%), Query Frame = 3
Query:  117 DKCEIKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGIEPSESAVLNGGQPGKHLIQGIGAGVIPPVLDVAMLD 839
            D   I  +V++LIG TPMVYLN++  GCVA IAAKLE+M+PC SVKDRI YSM+ DAE KG I+PGK+VL+E TSGNTGIGLAFIAASRGY+LI+ MP++ S+ERR++L+A GAE+ L DPA G  G V+K EEIL  TP+ Y+L QF+NPANP+IHYETTGPEIW+D+ GKVD F              RF+KEKNP  +V G+EP+ES +L+GG+PG H IQGIGAG IP  LD  ++D
Sbjct:  109 DGLNIADNVSQLIGKTPMVYLNSIAKGCVANIAAKLEIMEPCCSVKDRIGYSMVTDAEQKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTDPAKGMTGAVQKAEEILKNTPDAYMLQQFDNPANPKIHYETTGPEIWDDTKGKVDIFVAGIGTGGTITGVGRFIKEKNPKTQVIGVEPTESDILSGGKPGPHKIQGIGAGFIPKNLDQKIMD 349          
BLAST of CK936387 vs. ExPASy Swiss-Prot
Match: CYSKP_CAPAN (Cysteine synthase, chloroplastic/chromoplastic OS=Capsicum annuum PE=2 SV=1)

HSP 1 Score: 301.212 bits (770), Expect = 4.710e-81
Identity = 145/215 (67.44%), Postives = 174/215 (80.93%), Query Frame = 3
Query:  129 IKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGIEPSESAVLNGGQPG 773
            I +DVT+LIG+TPMVYLN +V GCVA IAAKLE+M+PC SVKDRI +SMI DAE+KGLI+PGKTVL+E TSGNTGIGLAFIAASRGYKLI+ MP++ S+ERR+IL+A GAE+ L DPA G +G V K EEILN TP+ YIL QF+NPANP+IHYETTGPEIW D+ GK+D                R+LKEKNPNIK+ G+EP+ES VL+GG+PG
Sbjct:   67 IAEDVTQLIGNTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMISDAEEKGLISPGKTVLVEPTSGNTGIGLAFIAASRGYKLILTMPASMSLERRVILKAFGAELVLTDPAKGMKGAVSKAEEILNNTPDAYILQQFDNPANPKIHYETTGPEIWEDTKGKIDILVAGIGTGGTISGTGRYLKEKNPNIKIIGVEPTESNVLSGGKPG 281          
BLAST of CK936387 vs. ExPASy Swiss-Prot
Match: CYSK4_ARATH (Probable cysteine synthase, chloroplastic OS=Arabidopsis thaliana GN=At3g03630 PE=2 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 1.330e-67
Identity = 129/237 (54.43%), Postives = 167/237 (70.46%), Query Frame = 3
Query:  129 IKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGIEPSESAVLNGGQPGKHLIQGIGAGVIPPVLDVAMLD 839
            I +DVT+LIG TPMVYLN V DGC+A IAAKLE M+PC SVKDRI  SMI +AE+ G ITP KTVL+E T+GNTG+G+AF+AA++GYKLI+ MP++ +IERR++LRALGAE+ L +P  G +G V K +EI+ +T N Y+  QF+N AN +IH+ETTGPEIW D+ G VD F               FLK  N +IKV G+EPSE +V++G  P          G +P +LDV +LD
Sbjct:   99 IAEDVTQLIGSTPMVYLNRVTDGCLADIAAKLESMEPCRSVKDRIGLSMINEAENSGAITPRKTVLVEPTTGNTGLGIAFVAAAKGYKLIVTMPASINIERRMLLRALGAEIVLTNPEKGLKGAVDKAKEIVLKTKNAYMFQQFDNTANTKIHFETTGPEIWEDTMGNVDIFVAGIGTGGTVTGTGGFLKMMNKDIKVVGVEPSERSVISGDNP----------GYLPGILDVKLLD 325          
BLAST of CK936387 vs. ExPASy Swiss-Prot
Match: CYSK_SYNY3 (Cysteine synthase OS=Synechocystis sp. (strain PCC 6803) GN=cysK PE=3 SV=2)

HSP 1 Score: 238.424 bits (607), Expect = 3.749e-62
Identity = 120/240 (50.00%), Postives = 160/240 (66.67%), Query Frame = 3
Query:  126 EIKKDVTELIGHTPMVYLNNV--VDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGIEPSESAVLNGGQPGKHLIQGIGAGVIPPVLDVAMLD 839
            +I  ++TELIG TP+V LN +  ++GC A+I  KLE M P +SVKDRI  +MI  AE +GLI PGKT+LIE TSGNTGI LA +AA++GY+LI+ MP T S ERR +L+A GA++ L   + G  G +++ +E+    PN Y+L QF+NPANP+IH +TT  EIW D+ G +D                  LKEK P+ +   +EP  S VL+GG+PG H IQGIGAG IP VLDV ++D
Sbjct:    2 KIASNITELIGRTPLVRLNRIPLLEGCGAKIVVKLEGMNPAASVKDRIGINMINRAEQEGLIEPGKTLLIEPTSGNTGIALAMVAAAKGYQLILTMPETMSQERRAMLKAYGAKLELTPGSEGMGGCIRRAQELAESLPNAYMLQQFDNPANPQIHQQTTALEIWQDTDGAIDFLVAGVGTGGTITGVASVLKEKKPSFQAIAVEPQNSPVLSGGKPGPHKIQGIGAGFIPEVLDVNLID 241          
BLAST of CK936387 vs. ExPASy Swiss-Prot
Match: CYSK_MYCTU (Cysteine synthase A OS=Mycobacterium tuberculosis GN=cysK PE=1 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 4.290e-58
Identity = 114/237 (48.10%), Postives = 151/237 (63.71%), Query Frame = 3
Query:  129 IKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGIEPSESAVLNGGQPGKHLIQGIGAGVIPPVLDVAMLD 839
            I +D+T+LIG TP+V L  V DG VA I AKLE   P +SVKDRI  +M++ AE  GLI P  T+++E TSGNTGI LA + A+RGY+ ++ MP T S+ERR++LRA GAE+ L   A G  G + K EE+       ++  QFENPANP IH  TT  E+W D+ GKVD                + +KE+ P+ +   +EP+ S VL+GGQ G H IQGIGAG +PPVLD  ++D
Sbjct:    3 IAEDITQLIGRTPLVRLRRVTDGAVADIVAKLEFFNPANSVKDRIGVAMLQAAEQAGLIKPD-TIILEPTSGNTGIALAMVCAARGYRCVLTMPETMSLERRMLLRAYGAELILTPGADGMSGAIAKAEELAKTDQRYFVPQQFENPANPAIHRVTTAEEVWRDTDGKVDIVVAGVGTGGTITGVAQVIKERKPSARFVAVEPAASPVLSGGQKGPHPIQGIGAGFVPPVLDQDLVD 238          
BLAST of CK936387 vs. ExPASy Swiss-Prot
Match: CYSK_MYCBO (Cysteine synthase A OS=Mycobacterium bovis GN=cysK PE=3 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 4.290e-58
Identity = 114/237 (48.10%), Postives = 151/237 (63.71%), Query Frame = 3
Query:  129 IKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGIEPSESAVLNGGQPGKHLIQGIGAGVIPPVLDVAMLD 839
            I +D+T+LIG TP+V L  V DG VA I AKLE   P +SVKDRI  +M++ AE  GLI P  T+++E TSGNTGI LA + A+RGY+ ++ MP T S+ERR++LRA GAE+ L   A G  G + K EE+       ++  QFENPANP IH  TT  E+W D+ GKVD                + +KE+ P+ +   +EP+ S VL+GGQ G H IQGIGAG +PPVLD  ++D
Sbjct:    3 IAEDITQLIGRTPLVRLRRVTDGAVADIVAKLEFFNPANSVKDRIGVAMLQAAEQAGLIKPD-TIILEPTSGNTGIALAMVCAARGYRCVLTMPETMSLERRMLLRAYGAELILTPGADGMSGAIAKAEELAKTDQRYFVPQQFENPANPAIHRVTTAEEVWRDTDGKVDIVVAGVGTGGTITGVAQVIKERKPSARFVAVEPAASPVLSGGQKGPHPIQGIGAGFVPPVLDQDLVD 238          
BLAST of CK936387 vs. ExPASy Swiss-Prot
Match: CYSK_MYCLE (Cysteine synthase A OS=Mycobacterium leprae GN=cysK PE=3 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 4.743e-57
Identity = 115/237 (48.52%), Postives = 150/237 (63.29%), Query Frame = 3
Query:  129 IKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGIEPSESAVLNGGQPGKHLIQGIGAGVIPPVLDVAMLD 839
            I +DVT+L+G+TP+V L  V +G +A + AKLE   P +SVKDRI  +MI  AE+ GLI P  TV++E TSGNTGI LA + A+RGY  ++ MP T SIERR++LRA GAE+ L   A G  G + K EE+       +I  QFENPANP IH  TT  E+W D+ GKVD F              R +KE+ P  +   +EP+ S VL+GGQ G H IQGIGAG +P VL + ++D
Sbjct:    3 IAEDVTQLVGNTPLVRLRRVTEGALADVVAKLESFNPANSVKDRIGVAMIDTAEEAGLIKPD-TVILEPTSGNTGIALAMVCAARGYHCVLTMPETMSIERRMLLRAYGAELILTPGADGMSGAIAKAEELAKSDKRYFIPQQFENPANPAIHAATTAEEVWRDTDGKVDIFVSGIGTGGTITGVARIIKERRPATQFVAVEPAASPVLSGGQKGPHPIQGIGAGFVPSVLVLDLVD 238          
The following BLAST results are available for this feature:
BLAST of CK936387 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
CYSK2_ORYSJ7.502e-8764.98Cysteine synthase OS=Oryza sativa subsp. japonica ... [more]
CYSKP_ARATH1.415e-8563.29Cysteine synthase, chloroplastic/chromoplastic OS=... [more]
CYSKP_SPIOL1.730e-8362.87Cysteine synthase, chloroplastic/chromoplastic OS=... [more]
CYSKM_ARATH2.950e-8361.83Cysteine synthase, mitochondrial OS=Arabidopsis th... [more]
CYSKP_CAPAN4.710e-8167.44Cysteine synthase, chloroplastic/chromoplastic OS=... [more]
CYSK4_ARATH1.330e-6754.43Probable cysteine synthase, chloroplastic OS=Arabi... [more]
CYSK_SYNY33.749e-6250.00Cysteine synthase OS=Synechocystis sp. (strain PCC... [more]
CYSK_MYCTU4.290e-5848.10Cysteine synthase A OS=Mycobacterium tuberculosis ... [more]
CYSK_MYCBO4.290e-5848.10Cysteine synthase A OS=Mycobacterium bovis GN=cysK... [more]
CYSK_MYCLE4.743e-5748.52Cysteine synthase A OS=Mycobacterium leprae GN=cys... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004383_A09 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0003_IF_A09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936387 ID=CK936387; Name=CK936387; organism=Citrus sinensis; type=EST; length=840bp
GGGGAATGTATTTCACAGATAAATTACACCAGGAACTGGTATCTCCATTN
NNNNNNCCAAGTGCTAGGCTGGCTGCTTGATTTTTTGAAAGTTTTTGGTG
AAGTAGCTCCATGGAGGACAAGTGTGAAATTAAGAAAGACGTTACGGAAT
TAATAGGCCATACACCGATGGTGTATCTCAATAATGTTGTGGATGGTTGT
GTCGCCCGTATTGCTGCCAAGCTAGAAATGATGCAACCTTGCTCTAGCGT
CAAAGACAGAATTGCATATAGTATGATCAAAGATGCAGAGGATAAGGGCT
TAATAACCCCAGGGAAGACTGTCCTCATTGAGCTAACTAGTGGAAACACC
GGCATTGGATTGGCCTTCATTGCAGCATCAAGGGGTTACAAACTTATCAT
TATAATGCCATCAACATACAGTATTGAGAGAAGAATAATTCTCAGAGCTT
TGGGAGCTGAGGTTTATCTTGCAGATCCAGCAGTGGGCTTTGAGGGGTTT
GTTAAAAAGGGTGAGGAGATACTAAACAGAACACCTAATGGTTATATTCT
TGGACAATTTGAAAATCCCGCGAATCCGGAGATTCATTACGAGACAACTG
GCCCAGAGATATGGAACGACTCAGGAGGGAAGGTTGATGCTTTTATAGCA
GGGATAGGAACTGGTGGTACTGTAACTGGTGCGGGGAGATTCCTTAAAGA
AAAGAACCCAAATATTAAGGTATATGGTATAGAACCATCTGAAAGTGCAG
TCTTGAATGGAGGACAACCTGGGAAGCATCTGATCCAGGGTATTGGTGCC
GGTGTCATCCCTCCTGTTTTGGACGTTGCCATGCTCGATG
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