CK936387

Overview
NameCK936387
Unique NameCK936387
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length840
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936387 vs. ExPASy Swiss-Prot
Match: CYSK_FLAS3 (Cysteine synthase OS=Flavobacterium sp. (strain K3-15 / DSM ID92-509) GN=cysK PE=3 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 2.280e-51
Identity = 110/235 (46.81%), Postives = 146/235 (62.13%), Query Frame = 3
Query:  135 KDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGIEPSESAVLNGGQPGKHLIQGIGAGVIPPVLDVAMLD 839
            ++  E IG+TP+V +NN+ +     I  KLE   P  S+KDRIA +MI+DAE KGL+    T+ IE TSGNTGIGLA +AA +GYKLI++MP + SIERR I+ A GAE  L     G +G ++K  E+   TPN +I  QF+NPAN +IH ETT  EI  D    +D                + LKEK PN+KV  +EP  S VL+GG P  H +QG+GAG +P +LD+ +LD
Sbjct:    4 QNALETIGNTPVVKINNLFNSD-HEIWIKLEKSNPGGSIKDRIALAMIEDAEAKGLLNKDSTI-IEPTSGNTGIGLALVAAVKGYKLILVMPESMSIERRKIMEAYGAEFVLTPREKGMKGAIEKANELAEETPNSWIPRQFDNPANVKIHVETTAQEILQDFPEGLDYVITGVGTGGHITGIAKALKEKYPNLKVIAVEPELSPVLSGGSPAPHPLQGLGAGFVPSILDITLLD 236          
BLAST of CK936387 vs. ExPASy Swiss-Prot
Match: CYSK_SALTY (Cysteine synthase A OS=Salmonella typhimurium GN=cysK PE=1 SV=2)

HSP 1 Score: 201.06 bits (510), Expect = 6.633e-51
Identity = 115/247 (46.56%), Postives = 156/247 (63.16%), Query Frame = 3
Query:  126 EIKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGY-ILGQFENPANPEIHYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLK--EKNPNIKVYGIEPSESAVLNGG------QPGKHLIQGIGAGVIPPVLDVAMLD 839
            +I +D +  IGHTP+V LN + +G   RI AK+E   P  SVK RI  +MI DAE +G++ PG   L+E TSGNTGI LA++AA+RGYKL + MP T SIERR +L+ALGA + L + A G +G ++K EEI+   P  Y +L QF NPANPEIH +TTGPEIW D+ G+VD F              R++K  +   ++    +EP++S V+         +PG H IQGIGAG IP  LD+ ++D
Sbjct:    3 KIYEDNSLTIGHTPLVRLNRIGNG---RILAKVESRNPSFSVKCRIGANMIWDAEKRGVLKPG-VELVEPTSGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKGMKGAIQKAEEIVASDPQKYLLLQQFSNPANPEIHEKTTGPEIWEDTDGQVDVFISGVGTGGTLTGVTRYIKGTKGKTDLITVAVEPTDSPVIAQALAGEEIKPGPHKIQGIGAGFIPGNLDLKLID 245          
BLAST of CK936387 vs. ExPASy Swiss-Prot
Match: CYSK_SALTI (Cysteine synthase A OS=Salmonella typhi GN=cysK PE=3 SV=2)

HSP 1 Score: 201.06 bits (510), Expect = 6.633e-51
Identity = 115/247 (46.56%), Postives = 156/247 (63.16%), Query Frame = 3
Query:  126 EIKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGY-ILGQFENPANPEIHYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLK--EKNPNIKVYGIEPSESAVLNGG------QPGKHLIQGIGAGVIPPVLDVAMLD 839
            +I +D +  IGHTP+V LN + +G   RI AK+E   P  SVK RI  +MI DAE +G++ PG   L+E TSGNTGI LA++AA+RGYKL + MP T SIERR +L+ALGA + L + A G +G ++K EEI+   P  Y +L QF NPANPEIH +TTGPEIW D+ G+VD F              R++K  +   ++    +EP++S V+         +PG H IQGIGAG IP  LD+ ++D
Sbjct:    3 KIYEDNSLTIGHTPLVRLNRIGNG---RILAKVESRNPSFSVKCRIGANMIWDAEKRGVLKPG-VELVEPTSGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKGMKGAIQKAEEIVASDPQKYLLLQQFSNPANPEIHEKTTGPEIWEDTDGQVDVFISGVGTGGTLTGVTRYIKGTKGKTDLITVAVEPTDSPVIAQALAGEEIKPGPHKIQGIGAGFIPGNLDLKLID 245          
BLAST of CK936387 vs. ExPASy Swiss-Prot
Match: CYSK_ECOLI (Cysteine synthase A OS=Escherichia coli (strain K12) GN=cysK PE=1 SV=2)

HSP 1 Score: 200.29 bits (508), Expect = 1.131e-50
Identity = 115/247 (46.56%), Postives = 156/247 (63.16%), Query Frame = 3
Query:  126 EIKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGY-ILGQFENPANPEIHYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLK--EKNPNIKVYGIEPSESAVLNGG------QPGKHLIQGIGAGVIPPVLDVAMLD 839
            +I +D +  IGHTP+V LN + +G   RI AK+E   P  SVK RI  +MI DAE +G++ PG   L+E TSGNTGI LA++AA+RGYKL + MP T SIERR +L+ALGA + L + A G +G ++K EEI+   P  Y +L QF NPANPEIH +TTGPEIW D+ G+VD F              R++K  +   ++    +EP++S V+         +PG H IQGIGAG IP  LD+ ++D
Sbjct:    3 KIFEDNSLTIGHTPLVRLNRIGNG---RILAKVESRNPSFSVKCRIGANMIWDAEKRGVLKPG-VELVEPTSGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKGMKGAIQKAEEIVASNPEKYLLLQQFSNPANPEIHEKTTGPEIWEDTDGQVDVFIAGVGTGGTLTGVSRYIKGTKGKTDLISVAVEPTDSPVIAQALAGEEIKPGPHKIQGIGAGFIPANLDLKLVD 245          
BLAST of CK936387 vs. ExPASy Swiss-Prot
Match: CYSK_ECO57 (Cysteine synthase A OS=Escherichia coli O157:H7 GN=cysK PE=3 SV=2)

HSP 1 Score: 200.29 bits (508), Expect = 1.131e-50
Identity = 115/247 (46.56%), Postives = 156/247 (63.16%), Query Frame = 3
Query:  126 EIKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGY-ILGQFENPANPEIHYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLK--EKNPNIKVYGIEPSESAVLNGG------QPGKHLIQGIGAGVIPPVLDVAMLD 839
            +I +D +  IGHTP+V LN + +G   RI AK+E   P  SVK RI  +MI DAE +G++ PG   L+E TSGNTGI LA++AA+RGYKL + MP T SIERR +L+ALGA + L + A G +G ++K EEI+   P  Y +L QF NPANPEIH +TTGPEIW D+ G+VD F              R++K  +   ++    +EP++S V+         +PG H IQGIGAG IP  LD+ ++D
Sbjct:    3 KIFEDNSLTIGHTPLVRLNRIGNG---RILAKVESRNPSFSVKCRIGANMIWDAEKRGVLKPG-VELVEPTSGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKGMKGAIQKAEEIVASNPEKYLLLQQFSNPANPEIHEKTTGPEIWEDTDGQVDVFIAGVGTGGTLTGVSRYIKGTKGKTDLISVAVEPTDSPVIAQALAGEEIKPGPHKIQGIGAGFIPANLDLKLVD 245          
BLAST of CK936387 vs. ExPASy Swiss-Prot
Match: SRPG_SYNE7 (Cysteine synthase, plasmid OS=Synechococcus elongatus (strain PCC 7942) GN=srpG PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.383e-48
Identity = 110/242 (45.45%), Postives = 147/242 (60.74%), Query Frame = 3
Query:  138 DVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYI-LGQFENPANPEIHYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKE-KNPNIKVYGIEPSESAVLNGG------QPGKHLIQGIGAGVIPPVLDVAMLD 839
            D ++ IG TP+V LN +V G  A + AK+E   P  SVK RI  +MI DAE +GL+ PGK  LIE TSGNTGI LAF+AA+RG  L + MP T S+ERR +L A GA++ L +   G  G V++ E+I    P+ Y+ L QF NPANP IH +TTGPEIW D+GG +D                R++K+ +   I    +EP  S V++        +PG H IQGIGAG IP  LD++++D
Sbjct:   10 DNSQTIGKTPLVRLNRIVKGAPATVLAKIEGRNPAYSVKCRIGAAMIWDAEQRGLLGPGKE-LIEPTSGNTGIALAFVAAARGIPLTLTMPETMSLERRKLLAAYGAKLVLTEGVKGMTGAVRRAEDIAASDPDRYVLLQQFRNPANPAIHEQTTGPEIWEDTGGAIDILVSGVGTGGTITGVSRYIKQTQGKPILSVAVEPEASPVISQQRSGLPLKPGPHKIQGIGAGFIPENLDLSLVD 250          
BLAST of CK936387 vs. ExPASy Swiss-Prot
Match: CYSK_STRP6 (Cysteine synthase OS=Streptococcus pyogenes serotype M6 GN=cysK PE=1 SV=3)

HSP 1 Score: 192.2 bits (487), Expect = 3.081e-48
Identity = 110/239 (46.03%), Postives = 146/239 (61.09%), Query Frame = 3
Query:  126 EIKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWND-SGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGIEPSESAVLNGGQPGKHLIQGIGAGVIPPVLDVAMLD 839
            +I K +TEL+G TP++ LN ++    A +  KLE   P SSVKDRIA SMI+ AE +GLI+PG  V+IE TSGNTGIGLA++ A++GY++II+MP T S+ERR I++A GAE+ L   A G +G + K E +       ++  QF NPANP IH +TT  EI        +DAF                LK+ +P   +Y +E  ESAVL+G +PG H IQGI AG IP  LD    D
Sbjct:    3 KIYKTITELVGQTPIIKLNRLIPNEAADVYVKLEAFNPGSSVKDRIALSMIEAAEAEGLISPGD-VIIEPTSGNTGIGLAWVGAAKGYRVIIVMPETMSLERRQIIQAYGAELVLTPGAEGMKGAIAKTETLAIEL-GAWMPMQFNNPANPSIHEKTTAQEILEAFKEISLDAFVSGVGTGGTLSGVSHVLKKASPETVIYAVEAEESAVLSGQEPGPHKIQGISAGFIPNTLDTKAYD 239          
BLAST of CK936387 vs. ExPASy Swiss-Prot
Match: CYSM_BACSU (Probable cysteine synthase OS=Bacillus subtilis GN=ytkP PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 7.590e-47
Identity = 107/241 (44.40%), Postives = 143/241 (59.34%), Query Frame = 3
Query:  126 EIKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEI---WNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGIEPSESAVLNGGQPGKHLIQGIGAGVIPPVLDVAMLD 839
            +I  +  +LIG TP+V LN +     A++  KLE   P  SVKDR AY MI +AE  GL+ PG +V+IE TSGNTGIGLA  AA+RGYK I++MP T + ER  +L+A GAEV L        G +KK +E+  + PN YI  QF+N ANP+ H +TT PEI     + G  + AF                LKE  P+I V+ +EP+ S VL+GG+PG H + G   G IPP+L+  + D
Sbjct:    3 KIVANTADLIGDTPLVRLNRLQPENAAQVYLKLEFFNPSGSVKDRAAYQMIIEAEQNGLLKPG-SVIIEPTSGNTGIGLAMNAAARGYKAILVMPDTMTKERINLLKAYGAEVVLTPGEERMPGSIKKAKELAEQIPNSYIPMQFDNTANPDAHRKTTAPEIARAIEEIGKPLGAFVASSGTGGTITGTGEALKELFPDITVHVVEPAGSPVLSGGKPGAHKLVGTSPGFIPPILNEDVYD 242          
BLAST of CK936387 vs. ExPASy Swiss-Prot
Match: CYSK_BUCAI (Cysteine synthase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=cysK PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 9.912e-47
Identity = 110/247 (44.53%), Postives = 147/247 (59.51%), Query Frame = 3
Query:  126 EIKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGY-ILGQFENPANPEIHYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLK--EKNPNIKVYGIEPSESAVL------NGGQPGKHLIQGIGAGVIPPVLDVAMLD 839
            +I +D +  IG+TP+V LN + +G    I  K+E   P  SVK RI  +MI  AE    I      LIE TSGNTGI LA++AASR Y+L + MP T SIER+ IL++LGAE+ L D   G +G + K  +I++R P+ Y +L QFENPANPEIH  TTGPEIWND+ G +D                R++K  ++  N+    +EPSES V+         +PG H IQGIG G IP  LD+ ++D
Sbjct:    3 KIYQDNSLTIGNTPLVRLNRIGNG---NILVKIESRNPSFSVKCRIGANMIWHAEKNNNINKN-VKLIEATSGNTGIALAYVAASRNYRLTLTMPETMSIERKKILKSLGAELILTDGRYGMKGAISKANDIISRNPSKYFLLKQFENPANPEIHQITTGPEIWNDTNGNLDILISAVGTGGTITGITRYIKKIKRKKNLISIAVEPSESPVITQFLAGKAIEPGPHKIQGIGPGFIPKNLDLTIID 245          
BLAST of CK936387 vs. ExPASy Swiss-Prot
Match: CYSK_BUCAP (Cysteine synthase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=cysK PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 7.104e-45
Identity = 109/247 (44.13%), Postives = 150/247 (60.73%), Query Frame = 3
Query:  126 EIKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGY-ILGQFENPANPEIHYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRF--LKEKNPNIKVYGIEPSESAV----LNGG--QPGKHLIQGIGAGVIPPVLDVAMLD 839
            +I +D +  IG+TP+V LNN+ +G    I AK+E   P  SVK RI  +MI DAE KG +     + IE TSGNTGI LA++AA+R Y L +IMP + SIERR +L++LGA + L +   G +G + K  EI++     Y +L QFENPANPEIH +TTGPEIW D+ G +D                ++  +KE   ++    +EP ES V    L+G   +PG H IQGIGAG IP  LD++++D
Sbjct:    3 KIYEDNSFTIGNTPLVRLNNIGNG---NILAKIESRNPSFSVKCRIGANMIWDAEKKGRLNKNIEI-IEATSGNTGIALAYVAAARNYSLTLIMPDSMSIERRKLLKSLGAHLILTNGKHGMKGAISKANEIVSLNTKRYLLLKQFENPANPEIHQKTTGPEIWKDTKGNIDILISGVGTGGTITGITKYIKIKEGKKDLISVAVEPLESPVITQFLSGKKIKPGLHKIQGIGAGFIPKNLDLSLID 245          
The following BLAST results are available for this feature:
BLAST of CK936387 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
CYSK_FLAS32.280e-5146.81Cysteine synthase OS=Flavobacterium sp. (strain K3... [more]
CYSK_SALTY6.633e-5146.56Cysteine synthase A OS=Salmonella typhimurium GN=c... [more]
CYSK_SALTI6.633e-5146.56Cysteine synthase A OS=Salmonella typhi GN=cysK PE... [more]
CYSK_ECOLI1.131e-5046.56Cysteine synthase A OS=Escherichia coli (strain K1... [more]
CYSK_ECO571.131e-5046.56Cysteine synthase A OS=Escherichia coli O157:H7 GN... [more]
SRPG_SYNE71.383e-4845.45Cysteine synthase, plasmid OS=Synechococcus elonga... [more]
CYSK_STRP63.081e-4846.03Cysteine synthase OS=Streptococcus pyogenes seroty... [more]
CYSM_BACSU7.590e-4744.40Probable cysteine synthase OS=Bacillus subtilis GN... [more]
CYSK_BUCAI9.912e-4744.53Cysteine synthase OS=Buchnera aphidicola subsp. Ac... [more]
CYSK_BUCAP7.104e-4544.13Cysteine synthase OS=Buchnera aphidicola subsp. Sc... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004383_A09 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0003_IF_A09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936387 ID=CK936387; Name=CK936387; organism=Citrus sinensis; type=EST; length=840bp
GGGGAATGTATTTCACAGATAAATTACACCAGGAACTGGTATCTCCATTN
NNNNNNCCAAGTGCTAGGCTGGCTGCTTGATTTTTTGAAAGTTTTTGGTG
AAGTAGCTCCATGGAGGACAAGTGTGAAATTAAGAAAGACGTTACGGAAT
TAATAGGCCATACACCGATGGTGTATCTCAATAATGTTGTGGATGGTTGT
GTCGCCCGTATTGCTGCCAAGCTAGAAATGATGCAACCTTGCTCTAGCGT
CAAAGACAGAATTGCATATAGTATGATCAAAGATGCAGAGGATAAGGGCT
TAATAACCCCAGGGAAGACTGTCCTCATTGAGCTAACTAGTGGAAACACC
GGCATTGGATTGGCCTTCATTGCAGCATCAAGGGGTTACAAACTTATCAT
TATAATGCCATCAACATACAGTATTGAGAGAAGAATAATTCTCAGAGCTT
TGGGAGCTGAGGTTTATCTTGCAGATCCAGCAGTGGGCTTTGAGGGGTTT
GTTAAAAAGGGTGAGGAGATACTAAACAGAACACCTAATGGTTATATTCT
TGGACAATTTGAAAATCCCGCGAATCCGGAGATTCATTACGAGACAACTG
GCCCAGAGATATGGAACGACTCAGGAGGGAAGGTTGATGCTTTTATAGCA
GGGATAGGAACTGGTGGTACTGTAACTGGTGCGGGGAGATTCCTTAAAGA
AAAGAACCCAAATATTAAGGTATATGGTATAGAACCATCTGAAAGTGCAG
TCTTGAATGGAGGACAACCTGGGAAGCATCTGATCCAGGGTATTGGTGCC
GGTGTCATCCCTCCTGTTTTGGACGTTGCCATGCTCGATG
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