CK936387

Overview
NameCK936387
Unique NameCK936387
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length840
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936387 vs. ExPASy Swiss-Prot
Match: CYSK_HAEIN (Cysteine synthase OS=Haemophilus influenzae GN=cysK PE=1 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 4.604e-44
Identity = 105/245 (42.86%), Postives = 144/245 (58.78%), Query Frame = 3
Query:  129 IKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYI-LGQFENPANPEIHYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLK-EKNPNIKVYGIEPSESAVLNGG------QPGKHLIQGIGAGVIPPVLDVAMLD 839
            I  D +  IG+TP+V L +   G    +  K+E   P  SVK RI  +M+  AE  G +T GK + ++ TSGNTGI LA++AA+RGYK+ + MP T S+ER+ +L  LG  + L + A G +G + K EEI+   P+ Y+ L QFENPANP+IH ETTGPEIW D+ GKVD                R +K +    I    +EP ES V++        +PG H IQGIGAG IP  LD++++D
Sbjct:    3 IYADNSYSIGNTPLVRLKHF--GHNGNVVVKIEGRNPSYSVKCRIGANMVWQAEKDGTLTKGKEI-VDATSGNTGIALAYVAAARGYKITLTMPETMSLERKRLLCGLGVNLVLTEGAKGMKGAIAKAEEIVASDPSRYVMLKQFENPANPQIHRETTGPEIWKDTDGKVDVVVAGVGTGGSITGISRAIKLDFGKQITSVAVEPVESPVISQTLAGEEVKPGPHKIQGIGAGFIPKNLDLSIID 244          
BLAST of CK936387 vs. ExPASy Swiss-Prot
Match: MCCA_BACSU (O-acetylserine dependent cystathionine beta-synthase OS=Bacillus subtilis GN=mccA PE=1 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 2.139e-41
Identity = 94/234 (40.17%), Postives = 131/234 (55.98%), Query Frame = 3
Query:  138 DVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGIEPSESAVLNGGQPGKHLIQGIGAGVIPPVLDVAMLD 839
            D+TELIG+TP++ L N        + AKLEMM P  S+KDR+   +I+DA D G + PG  V+IE T+GNTGIGLA  A   G K I  +P  +S E++ I++ALGA +       G +G ++K  ++     N Y + QF+N  NP  +Y+T GPE+W    G +  F               FLKEKNP +K   +EP  S +LNGG+P  H  +GIG   IP  +D +  D
Sbjct:    6 DITELIGNTPLLRLKNFDVPEGVAVYAKLEMMNPGGSIKDRLGDMLIRDALDSGKVKPGG-VIIEATAGNTGIGLALSARKYGLKAIFCVPEHFSREKQQIMQALGASIIHTPRQDGMQGAIQKAIQLETEIENSYCVLQFKNRVNPSTYYKTLGPEMWEALDGNIHTFVAGAGSGGTFAGTASFLKEKNPAVKTVIVEPVGS-ILNGGEPHAHKTEGIGMEFIPDYMDKSHFD 237          
BLAST of CK936387 vs. ExPASy Swiss-Prot
Match: CYSM_CAMJE (Cysteine synthase B OS=Campylobacter jejuni GN=cysM PE=3 SV=2)

HSP 1 Score: 167.933 bits (424), Expect = 6.223e-41
Identity = 93/238 (39.08%), Postives = 132/238 (55.46%), Query Frame = 3
Query:  126 EIKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGIEPSESAVLNGGQPGKHLIQGIGAGVIPPVLDVAMLD 839
            ++ + V+ELIG+TP+++L          + AK E + P  S+KDR A+ MIKDA D   I    T+ +E TSGNTGI LA I A  G K I +MP + S+ERR ++   GA + L    +G +G V K  EIL  TPN +++ QFEN +N   H + T  EI  D   ++D F                LKEK   + + G+EP  S +L+ G+ G H IQGIGA  IP +L+  ++D
Sbjct:    2 KVHEKVSELIGNTPIIHLKKFG----INVFAKCEFLNPSHSIKDRAAFEMIKDALDSKKINQDTTI-VEATSGNTGISLAMICADLGLKFIAVMPESMSLERRKMITLFGARLELTPANLGMKGAVDKANEILLNTPNSFMVSQFENISNKNAHRKNTALEILRDLDNELDIFVAGFGTGGTISGVGEILKEKLEKVHIVGVEPLNSPLLSKGEAGSHKIQGIGANFIPAILNKEVID 234          
BLAST of CK936387 vs. ExPASy Swiss-Prot
Match: CYSM_ECOLI (Cysteine synthase B OS=Escherichia coli (strain K12) GN=cysM PE=1 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 5.825e-39
Identity = 95/233 (40.77%), Postives = 131/233 (56.22%), Query Frame = 3
Query:  147 ELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGIEPSESAVLNGGQ--PGKHLIQGIGAGVIPPVLDVAMLD 839
            + IG+TP+V L  +     + +  KLE   P  SVKDR A SMI +AE +G I PG  VLIE TSGNTGI LA IAA +GY++ ++MP   S ERR  +RA GAE+ L     G EG      E+ NR   G +L QF NP NP  HY TTGPEIW  +GG++  F              RF++E++  + + G++P E + + G +  P ++L     A ++  VLD+   D
Sbjct:    6 QTIGNTPLVKLQRMGPDNGSEVWLKLEGNNPAGSVKDRAALSMIVEAEKRGEIKPGD-VLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEGARDLALEMANR-GEGKLLDQFNNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQPEEGSSIPGIRRWPTEYLPGIFNASLVDEVLDIHQRD 236          
BLAST of CK936387 vs. ExPASy Swiss-Prot
Match: CBS_RAT (Cystathionine beta-synthase OS=Rattus norvegicus GN=Cbs PE=1 SV=3)

HSP 1 Score: 160.229 bits (404), Expect = 1.298e-38
Identity = 100/248 (40.32%), Postives = 132/248 (53.23%), Query Frame = 3
Query:  126 EIKKDVTELIGHTPMVYLNNVVD--GCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGF---EGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGIEP-----SESAVLNGGQPGKHLIQGIGAGVIPPVLDVAMLD 839
            +I  D+   IG+TPMV +N +    G    + AK E      SVKDRI+  MI+DAE  G + PG T+ IE TSGNTGIGLA  AA +GY+ II+MP   S+E+  +LRALGAE+        F   E  V     + N  PN +IL Q+ N +NP  HY+ T  EI     GKVD                R LKEK P  K+ G++P     +E   LN  +   + ++GIG   IP VLD A++D
Sbjct:   72 KILPDILRKIGNTPMVRINRISKNAGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERAGTLKPGDTI-IEPTSGNTGIGLALAAAVKGYRCIIVMPEKMSMEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWRLKNEIPNSHILDQYRNASNPLAHYDDTAEEILQQCDGKVDMLVASAGTGGTITGIARKLKEKCPGCKIIGVDPEGSILAEPEELNQTEQTAYEVEGIGYDFIPTVLDRAVVD 318          
BLAST of CK936387 vs. ExPASy Swiss-Prot
Match: CBS_MOUSE (Cystathionine beta-synthase OS=Mus musculus GN=Cbs PE=2 SV=3)

HSP 1 Score: 158.303 bits (399), Expect = 4.931e-38
Identity = 99/248 (39.92%), Postives = 132/248 (53.23%), Query Frame = 3
Query:  126 EIKKDVTELIGHTPMVYLNNVVD--GCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGF---EGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGIEP-----SESAVLNGGQPGKHLIQGIGAGVIPPVLDVAMLD 839
            +I  D+   IG+TPMV +N +    G    + AK E      SVKDRI+  MI+DAE  G + PG T+ IE TSGNTGIGLA  AA +GY+ II+MP   S+E+  +LRALGAE+        F   E  V     + N  PN +IL Q+ N +NP  HY+ T  EI     GK+D                R LKEK P  K+ G++P     +E   LN  +   + ++GIG   IP VLD A++D
Sbjct:   72 KILPDILRKIGNTPMVRINKISKNAGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERAGNLKPGDTI-IEPTSGNTGIGLALAAAVKGYRCIIVMPEKMSMEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWRLKNEIPNSHILDQYRNASNPLAHYDDTAEEILQQCDGKLDMLVASAGTGGTITGIARKLKEKCPGCKIIGVDPEGSILAEPEELNQTEQTAYEVEGIGYDFIPTVLDRAVVD 318          
BLAST of CK936387 vs. ExPASy Swiss-Prot
Match: CBS_MACFA (Cystathionine beta-synthase OS=Macaca fascicularis GN=CBS PE=2 SV=3)

HSP 1 Score: 157.918 bits (398), Expect = 6.440e-38
Identity = 99/252 (39.29%), Postives = 132/252 (52.38%), Query Frame = 3
Query:  114 EDKCEIKKDVTELIGHTPMVYLNNVVD--GCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGF---EGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGIEP-----SESAVLNGGQPGKHLIQGIGAGVIPPVLDVAMLD 839
            E   +I  D+ + IG TPM+ +N +    G    + AK E      SVKDRI+  MI+DAE  G + PG T+ IE TSGNTGIGLA  AA RGY+ II+MP   S E+  +LRALGAE+        F   E  V     + N  PN +IL Q+ N +NP  HY+TT  EI     GK+D                R LKEK P  ++ G++P     +E   LN  +   + ++GIG   IP VLD  ++D
Sbjct:   71 EKSPKILPDILKKIGDTPMIRINKIGKKFGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERAGTLKPGDTI-IEPTSGNTGIGLALTAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWRLKNEIPNSHILDQYRNASNPLAHYDTTADEILRQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVDPEGSILAEPEELNQTEQTTYEVEGIGYDFIPTVLDRTVVD 321          
BLAST of CK936387 vs. ExPASy Swiss-Prot
Match: CBS_HUMAN (Cystathionine beta-synthase OS=Homo sapiens GN=CBS PE=1 SV=2)

HSP 1 Score: 157.918 bits (398), Expect = 6.440e-38
Identity = 99/248 (39.92%), Postives = 131/248 (52.82%), Query Frame = 3
Query:  126 EIKKDVTELIGHTPMVYLNNVVD--GCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGF---EGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGIEP-----SESAVLNGGQPGKHLIQGIGAGVIPPVLDVAMLD 839
            +I  D+ + IG TPMV +N +    G    + AK E      SVKDRI+  MI+DAE  G + PG T+ IE TSGNTGIGLA  AA RGY+ II+MP   S E+  +LRALGAE+        F   E  V     + N  PN +IL Q+ N +NP  HY+TT  EI     GK+D                R LKEK P  ++ G++P     +E   LN  +   + ++GIG   IP VLD  ++D
Sbjct:   75 KILPDILKKIGDTPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERDGTLKPGDTI-IEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWRLKNEIPNSHILDQYRNASNPLAHYDTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVDPEGSILAEPEELNQTEQTTYEVEGIGYDFIPTVLDRTVVD 321          
BLAST of CK936387 vs. ExPASy Swiss-Prot
Match: CYSM_PSEAE (Cysteine synthase B OS=Pseudomonas aeruginosa GN=cysM PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 8.411e-38
Identity = 92/231 (39.83%), Postives = 129/231 (55.84%), Query Frame = 3
Query:  141 VTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGIEPSESAVLNGGQ--PGKHLIQGIGAGVIPPVLDV 827
            + + +G+TP+V L  +       +  KLE   P  SVKDR A SMI  AE +G I PG T LIE TSGNTGI LA  AA +GYK+I+IMP   + ER+  + A GAE+ L     G EG     ++ L R   G +L QF N  NPE HY +TGPEIW  +GG +  F              R+LKE+NP +++ G++P E + + G +  P ++L +   A  +  V+D+
Sbjct:    8 IADCVGNTPLVRLQRLPGETSNTLLVKLEGNNPAGSVKDRPALSMITRAELRGDIRPGDT-LIEATSGNTGIALAMAAAIKGYKMILIMPDNSTAERKAAMTAYGAELILVSKEEGMEGARDLADK-LQREGRGKVLDQFANGDNPEAHYHSTGPEIWQQTGGSITHFVSSMGTTGTIMGVSRYLKEQNPAVQIVGLQPMEGSAIPGIRRWPQEYLPKIYDASRVDRVVDM 236          
BLAST of CK936387 vs. ExPASy Swiss-Prot
Match: CYSM_HELPY (Cysteine synthase OS=Helicobacter pylori GN=cysM PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.874e-37
Identity = 92/234 (39.32%), Postives = 130/234 (55.56%), Query Frame = 3
Query:  147 ELIGHTPMVYLNNVVDGCV---ARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGIEPSESAVLNGGQPGKHLIQGIGAGVIPPVLDVAMLD 839
            + IG TP+    N  D  +   + I AKLE + P  SVKDR+   +I +    G IT  KT +IE T+GNTGI LA +A     K I ++P  +S E++ I+RALGA V     + G  G +KK +E+    P+ Y+  QFENP NP  +Y T  PEI  + G  + +F              R+LKE+ P I++ G+EP E ++LNGG+PG H I+GIG   IPP  +   +D
Sbjct:    9 DAIGRTPVFKFTNK-DYPIPLNSAIYAKLEHLNPGGSVKDRLGQYLIGEGFKTGKIT-SKTTIIEPTAGNTGIALALVAIKHHLKTIFVVPEKFSTEKQQIMRALGALVINTPTSEGISGAIKKSKELAESIPDSYLPLQFENPDNPAAYYHTLAPEIVQELGTNLTSFVAGIGSGGTFAGTARYLKERIPAIRLIGVEP-EGSILNGGEPGPHEIEGIGVEFIPPFFENLDID 239          
The following BLAST results are available for this feature:
BLAST of CK936387 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
CYSK_HAEIN4.604e-4442.86Cysteine synthase OS=Haemophilus influenzae GN=cys... [more]
MCCA_BACSU2.139e-4140.17O-acetylserine dependent cystathionine beta-syntha... [more]
CYSM_CAMJE6.223e-4139.08Cysteine synthase B OS=Campylobacter jejuni GN=cys... [more]
CYSM_ECOLI5.825e-3940.77Cysteine synthase B OS=Escherichia coli (strain K1... [more]
CBS_RAT1.298e-3840.32Cystathionine beta-synthase OS=Rattus norvegicus G... [more]
CBS_MOUSE4.931e-3839.92Cystathionine beta-synthase OS=Mus musculus GN=Cbs... [more]
CBS_MACFA6.440e-3839.29Cystathionine beta-synthase OS=Macaca fascicularis... [more]
CBS_HUMAN6.440e-3839.92Cystathionine beta-synthase OS=Homo sapiens GN=CBS... [more]
CYSM_PSEAE8.411e-3839.83Cysteine synthase B OS=Pseudomonas aeruginosa GN=c... [more]
CYSM_HELPY1.874e-3739.32Cysteine synthase OS=Helicobacter pylori GN=cysM P... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004383_A09 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0003_IF_A09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936387 ID=CK936387; Name=CK936387; organism=Citrus sinensis; type=EST; length=840bp
GGGGAATGTATTTCACAGATAAATTACACCAGGAACTGGTATCTCCATTN
NNNNNNCCAAGTGCTAGGCTGGCTGCTTGATTTTTTGAAAGTTTTTGGTG
AAGTAGCTCCATGGAGGACAAGTGTGAAATTAAGAAAGACGTTACGGAAT
TAATAGGCCATACACCGATGGTGTATCTCAATAATGTTGTGGATGGTTGT
GTCGCCCGTATTGCTGCCAAGCTAGAAATGATGCAACCTTGCTCTAGCGT
CAAAGACAGAATTGCATATAGTATGATCAAAGATGCAGAGGATAAGGGCT
TAATAACCCCAGGGAAGACTGTCCTCATTGAGCTAACTAGTGGAAACACC
GGCATTGGATTGGCCTTCATTGCAGCATCAAGGGGTTACAAACTTATCAT
TATAATGCCATCAACATACAGTATTGAGAGAAGAATAATTCTCAGAGCTT
TGGGAGCTGAGGTTTATCTTGCAGATCCAGCAGTGGGCTTTGAGGGGTTT
GTTAAAAAGGGTGAGGAGATACTAAACAGAACACCTAATGGTTATATTCT
TGGACAATTTGAAAATCCCGCGAATCCGGAGATTCATTACGAGACAACTG
GCCCAGAGATATGGAACGACTCAGGAGGGAAGGTTGATGCTTTTATAGCA
GGGATAGGAACTGGTGGTACTGTAACTGGTGCGGGGAGATTCCTTAAAGA
AAAGAACCCAAATATTAAGGTATATGGTATAGAACCATCTGAAAGTGCAG
TCTTGAATGGAGGACAACCTGGGAAGCATCTGATCCAGGGTATTGGTGCC
GGTGTCATCCCTCCTGTTTTGGACGTTGCCATGCTCGATG
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