CK936387

Overview
NameCK936387
Unique NameCK936387
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length840
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936387 vs. ExPASy Swiss-Prot
Match: CYSM_SALTY (Cysteine synthase B OS=Salmonella typhimurium GN=cysM PE=1 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 3.196e-37
Identity = 92/233 (39.48%), Postives = 128/233 (54.94%), Query Frame = 3
Query:  147 ELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGIEPSESAVLNGGQ--PGKHLIQGIGAGVIPPVLDVAMLD 839
            + IG+TP+V L  +     + I  KLE   P  SVKDR A SMI +AE +G I PG  VLIE TSGNTGI LA IAA +GY++ ++MP   S ERR  +RA GAE+ L     G EG  +     ++    G +L QF NP NP  HY TTGPEIW  + G++  F              RFL+E+   + + G++P E + + G +  P +++     A ++  VLD+   D
Sbjct:    6 QTIGNTPLVKLQRLGPDNGSEIWVKLEGNNPAGSVKDRAALSMIVEAEKRGEIKPGD-VLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEG-ARDLALAMSERGEGKLLDQFNNPDNPYAHYTTTGPEIWRQTSGRITHFVSSMGTTGTITGVSRFLREQEKPVTIVGLQPEEGSSIPGIRRWPAEYMPGIFNASLVDEVLDIHQND 236          
BLAST of CK936387 vs. ExPASy Swiss-Prot
Match: CBS_RABIT (Cystathionine beta-synthase OS=Oryctolagus cuniculus GN=CBS PE=2 SV=3)

HSP 1 Score: 155.606 bits (392), Expect = 3.196e-37
Identity = 97/248 (39.11%), Postives = 131/248 (52.82%), Query Frame = 3
Query:  126 EIKKDVTELIGHTPMVYLNNVVD--GCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGF---EGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGIEP-----SESAVLNGGQPGKHLIQGIGAGVIPPVLDVAMLD 839
            +I  D+ + IG TPMV +N +    G    + AK E      SVKDRI+  MI+DAE  G + PG T+ IE TSGNTGIGLA  AA +GY+ II+MP   S+E+  +LRALGAE+        F   E  V     +    PN +IL Q+ N +NP  HY+TT  EI     GK+D                R LKEK P  ++ G++P     +E   LN  +   + ++GIG   IP VLD  ++D
Sbjct:   75 KILPDILQKIGDTPMVRINKIGKNFGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERAGTLRPGDTI-IEPTSGNTGIGLALAAAVKGYRCIIVMPEKMSLEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWRLKQEIPNSHILDQYRNASNPLAHYDTTAEEILQQCDGKLDMLVASAGTGGTITGIARKLKEKCPGCQIIGVDPEGSILAEPEELNQTEVTAYEVEGIGYDFIPTVLDRTVVD 321          
BLAST of CK936387 vs. ExPASy Swiss-Prot
Match: CYSM_HELPJ (Cysteine synthase OS=Helicobacter pylori J99 GN=cysM PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 4.174e-37
Identity = 85/202 (42.08%), Postives = 118/202 (58.42%), Query Frame = 3
Query:  210 IAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGIEPSESAVLNGGQPGKHLIQGIGAGVIPP 815
            I AKLE + P  SVKDR+   +IK+A     IT   T +IE T+GNTGI LA +A     K I ++P  +S E++ I+RALGA V     + G  G +KK +E+    P+ Y+  QFENP NP  +Y T  PEI  + G  + +F              ++LKE+ PNI++ G+EP E ++LNGG+PG H I+GIG   IPP
Sbjct:   31 IYAKLEHLNPGGSVKDRLGQYLIKEAFRTRKIT-STTTIIEPTAGNTGIALALVAIKHHLKTIFVVPKKFSTEKQQIMRALGALVINTPTSEGISGAIKKSKELAESIPDSYLPLQFENPDNPAAYYHTLAPEIVQELGTNLTSFVAGIGSGGTFAGMAKYLKERIPNIRLIGVEP-EGSILNGGEPGPHEIEGIGVEFIPP 230          
BLAST of CK936387 vs. ExPASy Swiss-Prot
Match: CYSK_EMENI (Cysteine synthase OS=Emericella nidulans GN=cysB PE=3 SV=2)

HSP 1 Score: 154.836 bits (390), Expect = 5.452e-37
Identity = 101/247 (40.89%), Postives = 135/247 (54.66%), Query Frame = 3
Query:  141 VTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGF---EGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKE-KNPNIKVYGIEPS----ESAVLNGG----QPGKHLIQGIGAGVIPPVL--DVAMLD 839
            +TE IG+TP++ L  + +   + I AK E   P  SVKDR A  ++KDAE++GL+ PG TV +E T+GNTGIGLA +  S+GYKL+I MP+T S  +  +LR LGAEVY   PAV F   E +  K         N     QF+N AN   H ETTGPEIW  +GGK+DAF               +LK+     +K +  +P      S + +GG    + G  + +GIG G I   L  DV  LD
Sbjct:   36 LTEAIGNTPLIRLKRLSEETGSNILAKAEFQNPGGSVKDRAALYVVKDAEERGLLKPGGTV-VEGTAGNTGIGLAHVCRSKGYKLVIYMPNTQSQGKIDLLRLLGAEVYPV-PAVAFDNPENYNHKARRHAESLDNAVWTNQFDNTANRRAHIETTGPEIWAQTGGKLDAFTCSTGTGGTLAGITYYLKQASGGRVKSFLADPPGSVLHSYIQSGGKLVERSGSSITEGIGQGRITDNLQPDVGTLD 280          
BLAST of CK936387 vs. ExPASy Swiss-Prot
Match: CBS_DICDI (Cystathionine beta-synthase OS=Dictyostelium discoideum GN=cysB PE=2 SV=2)

HSP 1 Score: 147.517 bits (371), Expect = 8.704e-35
Identity = 91/244 (37.30%), Postives = 127/244 (52.05%), Query Frame = 3
Query:  129 IKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGF---EGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGIEPSESAVLN----GGQPGKHLIQGIGAGVIPPVLDVAMLD 839
            I  ++ + IG TP+V +N V       + AK E      SVKDRI + MI DAE+ G I  G T LIE TSGNTGIGLA  AA +GYK+II +P   S E+  +L+ALGAE+        F   E  +   +++ +  PN +IL Q+ NP+NP  HY+ T  E+     GK+D                R +KE+ PN  V G++P  S +            + I+GIG   IP VL+  ++D
Sbjct:   32 IMDNILDNIGGTPLVRVNKVSSDLECELVAKCEFFNAGGSVKDRIGHRMIVDAEESGRIKKGDT-LIEPTSGNTGIGLALTAAIKGYKMIITLPEKMSQEKVDVLKALGAEIIRTPTEAAFDAPESHIGVAKKLNSEIPNSHILDQYGNPSNPLAHYDGTAEELLEQCEGKIDMIVCTAGTGGTITGIARKIKERLPNCIVVGVDPHGSILAQPESLNNTNKSYKIEGIGYDFIPNVLERKLVD 274          
BLAST of CK936387 vs. ExPASy Swiss-Prot
Match: CYSM_AQUAE (Cysteine synthase OS=Aquifex aeolicus GN=cysM PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.939e-34
Identity = 90/240 (37.50%), Postives = 135/240 (56.25%), Query Frame = 3
Query:  132 KKDVTELIGHTPMVYLNNVVDGCV---ARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYI-LGQFENPANPEIHYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGIEPSESAVLNGGQPGKHLIQGIGAGVIPPVLDVAMLD 839
            ++ + +L+G+TP+V +   +   +     I AKLE   P  SVKDR A SM  DA  +GLI  GK V+I+ TSGNTGI LA + A+ G  + + MP+  S ER+ I++A GA++YL DP  G +G +    E++ + P  Y+ L Q+ NPAN + H+ +TG EIWN + G++  F              R LK  NPNI+V G++P+     +G +  KH    I + + P + D   LD
Sbjct:   22 RETILKLVGNTPLVRVKKCLPEDIPEDVEIWAKLESFNPGGSVKDRPALSMFLDALKRGLIKEGK-VVIDATSGNTGIALAMVGAALGVPVELAMPANVSEERKKIIKAFGAKLYLTDPLEGTDGAILFVRELVQKYPEKYVYLDQYNNPANWKAHFYSTGIEIWNQTKGRITHFVAGIGTGGTIMGTGRRLKIYNPNIQVIGVQPAYP--FHGIEGLKH----IESSIKPGIFDETFLD 254          
BLAST of CK936387 vs. ExPASy Swiss-Prot
Match: CBS_YEAST (Cystathionine beta-synthase OS=Saccharomyces cerevisiae GN=CYS4 PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.144e-33
Identity = 90/257 (35.02%), Postives = 136/257 (52.92%), Query Frame = 3
Query:  114 EDKCEIKKDVTELIGHTPMVYLNNVVD--GCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGF---EGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWN-----DSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGIEPSESAV-----LNGGQPGKHLIQGIGAGVIPPVLDVAMLD 839
            E + + + +V +L+G+TP++ L  +    G   +I AKLE+  P  S+KDRIA SM+++AE  G I P ++ LIE TSGNTGIGLA I A +GY+ II +P   S E+  +L+ALGAE+     A  +   E  +   +++    P   IL Q+ N  NPE HY  TG EI       +    + A               ++LKE+N  I++ G +P  S +     LN      + ++GIG   +P VLD  ++D
Sbjct:    5 EQQADSRHNVIDLVGNTPLIALKKLPKALGIKPQIYAKLELYNPGGSIKDRIAKSMVEEAEASGRIHPSRSTLIEPTSGNTGIGLALIGAIKGYRTIITLPEKMSNEKVSVLKALGAEIIRTPTAAAWDSPESHIGVAKKLEKEIPGAVILDQYNNMMNPEAHYFGTGREIQRQLEDLNLFDNLRAVVAGAGTGGTISGISKYLKEQNDKIQIVGADPFGSILAQPENLNKTDITDYKVEGIGYDFVPQVLDRKLID 261          
BLAST of CK936387 vs. ExPASy Swiss-Prot
Match: CYSK1_SCHPO (Cysteine synthase 1 OS=Schizosaccharomyces pombe GN=cys11 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 5.280e-32
Identity = 92/241 (38.17%), Postives = 126/241 (52.28%), Query Frame = 3
Query:  153 IGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFE---GFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNP-NIKVYGIEPSESAVLN-----GGQP---GKHLIQGIG----AGVIPPVLDV 827
            IG TP++ LN + +     I AK E   P  SVKDR AY +++DAE KG ++ G T+ +E T+GNTGIGLA IA +RGYK +I MP+T S  +   L+ LGAEV+   P   F     +  +       TPN     QF+N AN   HYETTGPEIW+ + G VD F              ++LKEK+   +  +  +P  S + +     G  P   G    +GIG     G + PV D+
Sbjct:   21 IGRTPLIRLNTLSNETGCNILAKAEFQNPGGSVKDRAAYYVVRDAEKKGKLSRGGTI-VEGTAGNTGIGLAHIARARGYKCVIYMPNTQSQAKIDTLKFLGAEVHPV-PVAPFSNPLNYNHQARRHAESTPNASWTDQFDNVANLLSHYETTGPEIWDQTKGTVDGFTCSTGTGGTFAGVTKYLKEKSDGRVASFVADPPGSVLYSHIKTKGKHPDNKGSSFTEGIGQGRITGNVQPVYDL 259          
BLAST of CK936387 vs. ExPASy Swiss-Prot
Match: CYSM_PSESY (Cysteine synthase B (Fragment) OS=Pseudomonas syringae pv. syringae GN=cysM PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.438e-29
Identity = 74/163 (45.40%), Postives = 94/163 (57.67%), Query Frame = 3
Query:  141 VTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGG 629
            + + +G+TP+V L  +       +  KLE   P  SVKDR A SMI  AE +G I PG T LIE TSGNTGI LA  AA +GY++I+IMP   S ER+  + A GAE+       G EG  +   E +     G +L QF N  NPE HY +TGPEIW  +GG
Sbjct:    8 IADCVGNTPLVRLQRMAGNTSNTLLLKLEGNNPAGSVKDRPALSMITRAELRGQIHPGDT-LIEATSGNTGIALAMAAAIKGYRMILIMPDNSSAERKAAMTAYGAELISVSKDDGMEG-ARDLAERMQAEGRGKVLDQFANGDNPEAHYTSTGPEIWRQTGG 168          
BLAST of CK936387 vs. ExPASy Swiss-Prot
Match: CYSM_MYCTU (Cysteine synthase B OS=Mycobacterium tuberculosis GN=cysM PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 7.137e-29
Identity = 83/237 (35.02%), Postives = 120/237 (50.63%), Query Frame = 3
Query:  147 ELIGHTPMVYLNNVV-------DGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGIEPSESAVLNGGQPGKHLIQGIGAGVIPPVLDVAML 836
            + +G+TP+V L  +        DG   R+ AKLE   P  S+KDR A  MI+ AE  GL+ PG T+L E TSGNTGI LA  A  +GY+LI +MP   S+ERR +L   GA++  +    G    V   +E+    P+  +L Q+ NPAN + HY  TGPE+  D   ++  F              RFL+E   N+K+   EP           G + ++ +  G +P + D  +L
Sbjct:    9 QALGNTPLVGLQRLSPRWDDGRDGPHVRLWAKLEDRNPTGSIKDRPAVRMIEQAEADGLLRPGATIL-EPTSGNTGISLAMAARLKGYRLICVMPENTSVERRQLLELYGAQIIFSAAEGGSNTAVATAKELAATNPSWVMLYQYGNPANTDSHYCGTGPELLADL-PEITHFVAGLGTTGTLMGTGRFLREHVANVKIVAAEPRYG-------EGVYALRNMDEGFVPELYDPEIL 236          
The following BLAST results are available for this feature:
BLAST of CK936387 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
CYSM_SALTY3.196e-3739.48Cysteine synthase B OS=Salmonella typhimurium GN=c... [more]
CBS_RABIT3.196e-3739.11Cystathionine beta-synthase OS=Oryctolagus cunicul... [more]
CYSM_HELPJ4.174e-3742.08Cysteine synthase OS=Helicobacter pylori J99 GN=cy... [more]
CYSK_EMENI5.452e-3740.89Cysteine synthase OS=Emericella nidulans GN=cysB P... [more]
CBS_DICDI8.704e-3537.30Cystathionine beta-synthase OS=Dictyostelium disco... [more]
CYSM_AQUAE1.939e-3437.50Cysteine synthase OS=Aquifex aeolicus GN=cysM PE=3... [more]
CBS_YEAST2.144e-3335.02Cystathionine beta-synthase OS=Saccharomyces cerev... [more]
CYSK1_SCHPO5.280e-3238.17Cysteine synthase 1 OS=Schizosaccharomyces pombe G... [more]
CYSM_PSESY1.438e-2945.40Cysteine synthase B (Fragment) OS=Pseudomonas syri... [more]
CYSM_MYCTU7.137e-2935.02Cysteine synthase B OS=Mycobacterium tuberculosis ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004383_A09 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0003_IF_A09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936387 ID=CK936387; Name=CK936387; organism=Citrus sinensis; type=EST; length=840bp
GGGGAATGTATTTCACAGATAAATTACACCAGGAACTGGTATCTCCATTN
NNNNNNCCAAGTGCTAGGCTGGCTGCTTGATTTTTTGAAAGTTTTTGGTG
AAGTAGCTCCATGGAGGACAAGTGTGAAATTAAGAAAGACGTTACGGAAT
TAATAGGCCATACACCGATGGTGTATCTCAATAATGTTGTGGATGGTTGT
GTCGCCCGTATTGCTGCCAAGCTAGAAATGATGCAACCTTGCTCTAGCGT
CAAAGACAGAATTGCATATAGTATGATCAAAGATGCAGAGGATAAGGGCT
TAATAACCCCAGGGAAGACTGTCCTCATTGAGCTAACTAGTGGAAACACC
GGCATTGGATTGGCCTTCATTGCAGCATCAAGGGGTTACAAACTTATCAT
TATAATGCCATCAACATACAGTATTGAGAGAAGAATAATTCTCAGAGCTT
TGGGAGCTGAGGTTTATCTTGCAGATCCAGCAGTGGGCTTTGAGGGGTTT
GTTAAAAAGGGTGAGGAGATACTAAACAGAACACCTAATGGTTATATTCT
TGGACAATTTGAAAATCCCGCGAATCCGGAGATTCATTACGAGACAACTG
GCCCAGAGATATGGAACGACTCAGGAGGGAAGGTTGATGCTTTTATAGCA
GGGATAGGAACTGGTGGTACTGTAACTGGTGCGGGGAGATTCCTTAAAGA
AAAGAACCCAAATATTAAGGTATATGGTATAGAACCATCTGAAAGTGCAG
TCTTGAATGGAGGACAACCTGGGAAGCATCTGATCCAGGGTATTGGTGCC
GGTGTCATCCCTCCTGTTTTGGACGTTGCCATGCTCGATG
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