CK936382

Overview
NameCK936382
Unique NameCK936382
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length822
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936382 vs. ExPASy Swiss-Prot
Match: CHSY_CALCH (Chalcone synthase OS=Callistephus chinensis GN=CHS PE=2 SV=2)

HSP 1 Score: 267.314 bits (682), Expect = 7.261e-71
Identity = 127/161 (78.88%), Postives = 143/161 (88.82%), Query Frame = 2
Query:  170 PDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVP 652
            PD + ERPL++++S +QTILPDS+GAIDGHLREVGLTFHLLKDVPGLISKNIEK+L++AF+P+GI+DWNSIFWIAHPGGPAILDQV            ATR VLSEYGNMSSACVLFI+DEMRKKSAE+  ATTGEGLDWGVLFGFGPGLTVETVVLHS+P
Sbjct:  231 PDLTTERPLFEMISAAQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIEKALTQAFSPLGITDWNSIFWIAHPGGPAILDQVELKLGLKEEKMRATRHVLSEYGNMSSACVLFIIDEMRKKSAEDGAATTGEGLDWGVLFGFGPGLTVETVVLHSLP 391          
BLAST of CK936382 vs. ExPASy Swiss-Prot
Match: CHS7_SORBI (Chalcone synthase 7 OS=Sorghum bicolor GN=CHS7 PE=3 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 7.261e-71
Identity = 132/162 (81.48%), Postives = 141/162 (87.04%), Query Frame = 2
Query:  170 PDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 655
            PD  VE PL+QLVS SQTILPDS+GAIDGHLREVGLTFHLLKDVPGLISKNIE+SL EAF P+GI+D+NSIFW+AHPGGPAILDQV            ATR VLSEYGNMSSACVLFILDEMRK+SAEE +ATTGEG DWGVLFGFGPGLTVETVVLHSVPI
Sbjct:  232 PDKRVECPLFQLVSASQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIERSLEEAFKPLGITDYNSIFWVAHPGGPAILDQVEAKVGLKKERMRATRHVLSEYGNMSSACVLFILDEMRKRSAEEGQATTGEGFDWGVLFGFGPGLTVETVVLHSVPI 393          
BLAST of CK936382 vs. ExPASy Swiss-Prot
Match: CHSY_CHRAE (Chalcone synthase OS=Chrysosplenium americanum GN=CHS PE=2 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 1.239e-70
Identity = 131/162 (80.86%), Postives = 142/162 (87.65%), Query Frame = 2
Query:  170 PDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQV-XXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVP 652
            PDT++ERPL++LVS +QTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSL EAF P+GI+DWNSIFWIAHPGGPAILDQV             ATR +LSEYGNMSSACVLFILDEMRKKSA   +ATTG+GL+WGVLFGFGPGLTVETVVLHSVP
Sbjct:  231 PDTAIERPLFELVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLIEAFKPIGINDWNSIFWIAHPGGPAILDQVEHKLAPGRRANSRATRHILSEYGNMSSACVLFILDEMRKKSARRREATTGDGLEWGVLFGFGPGLTVETVVLHSVP 392          
BLAST of CK936382 vs. ExPASy Swiss-Prot
Match: CHS1_MAIZE (Chalcone synthase WHP1 OS=Zea mays GN=WHP1 PE=3 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 1.239e-70
Identity = 129/162 (79.63%), Postives = 141/162 (87.04%), Query Frame = 2
Query:  170 PDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 655
            PD  VERPL+QLVS +QTILPDS+GAIDGHLREVGL FHLLKDVPGLISKNIE++L +AF P+GISDWNSIFW+AHPGGPAILDQV            ATR VLSEYGNMSSACVLFILDEMRK+ AE+ ++TTGEGLDWGVLFGFGPGLTVETVVLHSVPI
Sbjct:  231 PDGRVERPLFQLVSAAQTILPDSEGAIDGHLREVGLAFHLLKDVPGLISKNIERALEDAFEPLGISDWNSIFWVAHPGGPAILDQVEAKVGLDKARMRATRHVLSEYGNMSSACVLFILDEMRKRPAEDGQSTTGEGLDWGVLFGFGPGLTVETVVLHSVPI 392          
BLAST of CK936382 vs. ExPASy Swiss-Prot
Match: CHS1_HORVU (Chalcone synthase 1 OS=Hordeum vulgare GN=CHS1 PE=3 SV=1)

HSP 1 Score: 266.159 bits (679), Expect = 1.618e-70
Identity = 130/164 (79.27%), Postives = 140/164 (85.37%), Query Frame = 2
Query:  170 PDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPIKA 661
            PD SVERPL+QLVS SQTILPDS+GAIDGHLREVGLTFHLLKDVPGLISKNIE++L EAF P+GI  WNS+FWIAH GGPAILD V            ATR VLSEYGNMSSACVLFI+DEMRK+SAE+  ATTGEG+DWGVLFGFGPGLTVETVVLHSVPI A
Sbjct:  231 PDLSVERPLFQLVSASQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIERALEEAFKPLGIDHWNSVFWIAHQGGPAILDMVEAKVNLNKERMRATRHVLSEYGNMSSACVLFIMDEMRKRSAEDGHATTGEGMDWGVLFGFGPGLTVETVVLHSVPISA 394          
BLAST of CK936382 vs. ExPASy Swiss-Prot
Match: CHSY_MATIN (Chalcone synthase OS=Matthiola incana GN=CHS PE=2 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 2.113e-70
Identity = 131/163 (80.37%), Postives = 143/163 (87.73%), Query Frame = 2
Query:  170 PDTSV-ERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 655
            PDTSV E+P++++VS +QTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSL EAF P+GISDWNS+FWIAHPGGPAILDQV            ATR VLSEYGNMSSACVLFILDEMRKKSA++  ATTGEGL+WGVLFGFGPGLTVETVVL SVP+
Sbjct:  232 PDTSVGEKPIFEMVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLEEAFKPLGISDWNSLFWIAHPGGPAILDQVEIKLGLKAEKMRATRHVLSEYGNMSSACVLFILDEMRKKSAQDGVATTGEGLEWGVLFGFGPGLTVETVVLRSVPL 394          
BLAST of CK936382 vs. ExPASy Swiss-Prot
Match: CHSY_CARAN (Chalcone synthase OS=Cardamine amara GN=CHS PE=3 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 2.113e-70
Identity = 130/163 (79.75%), Postives = 143/163 (87.73%), Query Frame = 2
Query:  170 PDTSV-ERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 655
            PDTSV E+P++++VS +QTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSL EAF P+GISDWNS+FWIAHPGGPAILDQV            ATR V+ EYGNMSSACVLFILDEMRKKSA++  ATTGEGL+WGVLFGFGPGLTVETVVLHSVP+
Sbjct:  233 PDTSVGEKPIFEMVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLDEAFKPLGISDWNSLFWIAHPGGPAILDQVEIKLGLKEEKMRATRHVMREYGNMSSACVLFILDEMRKKSAKDGVATTGEGLEWGVLFGFGPGLTVETVVLHSVPL 395          
BLAST of CK936382 vs. ExPASy Swiss-Prot
Match: CHSY_ANTMA (Chalcone synthase OS=Antirrhinum majus GN=CHS PE=3 SV=1)

HSP 1 Score: 265.388 bits (677), Expect = 2.759e-70
Identity = 129/162 (79.63%), Postives = 140/162 (86.42%), Query Frame = 2
Query:  170 PDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 655
            P   VERPL+Q+V+ +QT+LPDS GAIDGHLREVGLTFHLLKDVPGLISKNIEKSL EAF P+GISDWNS+FWIAHPGGPAILDQV            +TRQVLSEYGNMSSACVLFILDEMRK SA+E  +TTGEGLDWGVLFGFGPGLTVETVVLHSVP+
Sbjct:  228 PVVGVERPLFQIVTAAQTLLPDSHGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLKEAFDPLGISDWNSVFWIAHPGGPAILDQVEEKLGLKPEKLRSTRQVLSEYGNMSSACVLFILDEMRKSSAKEGMSTTGEGLDWGVLFGFGPGLTVETVVLHSVPL 389          
BLAST of CK936382 vs. ExPASy Swiss-Prot
Match: CHS3_SINAL (Chalcone synthase 3 OS=Sinapis alba GN=CHS3 PE=2 SV=1)

HSP 1 Score: 265.388 bits (677), Expect = 2.759e-70
Identity = 130/163 (79.75%), Postives = 142/163 (87.12%), Query Frame = 2
Query:  170 PDTSV-ERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 655
            PDTSV E+P++++VS +QTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSL EAF P+GISDWNS+FWIAHPGGPAILD V            ATR VLSEYGNMSSACVLFILDEMR+KS E+  ATTGEGL+WGVLFGFGPGLTVETVVLHSVP+
Sbjct:  233 PDTSVGEKPIFEMVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLDEAFKPLGISDWNSLFWIAHPGGPAILDDVEKKLGLKAEKMRATRHVLSEYGNMSSACVLFILDEMRRKSKEDGVATTGEGLEWGVLFGFGPGLTVETVVLHSVPV 395          
BLAST of CK936382 vs. ExPASy Swiss-Prot
Match: CHSY_ARATH (Chalcone synthase OS=Arabidopsis thaliana GN=CHS PE=1 SV=1)

HSP 1 Score: 264.618 bits (675), Expect = 4.707e-70
Identity = 130/163 (79.75%), Postives = 143/163 (87.73%), Query Frame = 2
Query:  170 PDTSV-ERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 655
            PDTSV E+P++++VS +QTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNI KSL EAF P+GISDWNS+FWIAHPGGPAILDQV            ATR VLSEYGNMSSACVLFILDEMR+KSA++  ATTGEGL+WGVLFGFGPGLTVETVVLHSVP+
Sbjct:  233 PDTSVGEKPIFEMVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIVKSLDEAFKPLGISDWNSLFWIAHPGGPAILDQVEIKLGLKEEKMRATRHVLSEYGNMSSACVLFILDEMRRKSAKDGVATTGEGLEWGVLFGFGPGLTVETVVLHSVPL 395          
The following BLAST results are available for this feature:
BLAST of CK936382 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
CHSY_CALCH7.261e-7178.88Chalcone synthase OS=Callistephus chinensis GN=CHS... [more]
CHS7_SORBI7.261e-7181.48Chalcone synthase 7 OS=Sorghum bicolor GN=CHS7 PE=... [more]
CHSY_CHRAE1.239e-7080.86Chalcone synthase OS=Chrysosplenium americanum GN=... [more]
CHS1_MAIZE1.239e-7079.63Chalcone synthase WHP1 OS=Zea mays GN=WHP1 PE=3 SV... [more]
CHS1_HORVU1.618e-7079.27Chalcone synthase 1 OS=Hordeum vulgare GN=CHS1 PE=... [more]
CHSY_MATIN2.113e-7080.37Chalcone synthase OS=Matthiola incana GN=CHS PE=2 ... [more]
CHSY_CARAN2.113e-7079.75Chalcone synthase OS=Cardamine amara GN=CHS PE=3 S... [more]
CHSY_ANTMA2.759e-7079.63Chalcone synthase OS=Antirrhinum majus GN=CHS PE=3... [more]
CHS3_SINAL2.759e-7079.75Chalcone synthase 3 OS=Sinapis alba GN=CHS3 PE=2 S... [more]
CHSY_ARATH4.707e-7079.75Chalcone synthase OS=Arabidopsis thaliana GN=CHS P... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004382_H12 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IVF_H12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936382 ID=CK936382; Name=CK936382; organism=Citrus sinensis; type=EST; length=822bp
GGGGAGTGCACACTCACCAAGCACGAGCCTCAAAACATATTCATTACGGG
TTTAACTTGCAATGGCAACCGTTCAAGAGATCAGAAACGCTCAGCGTGCC
GACGGCCCGGCCATCGTCCTCGCCATCGGTACGGCCACGCCTGCCCACAG
TGTCAACCAGGCTGATTATCCTGACACGTCGGTCGAGCGTCCGTTGTATC
AGCTTGTGTCGACTTCGCAGACGATCCTCCCTGACTCTGACGGTGCAATT
GACGGACACTTGCGCGAAGTCGGTCTCACTTTCCATTTGCTTAAAGACGT
CCCCGGCTTGATCTCAAAGAATATAGAGAAAAGCCTGTCGGAAGCGTTCG
CCCCGGTTGGCATCAGCGACTGGAACTCGATATTCTGGATCGCTCACCCC
GGTGGGCCCGCAATTCTGGACCAAGTGGAGTCTAAACTCGGCCTCAAAGA
GGAGAAGCTGAAGGCCACACGTCAAGTGTTGAGTGAGTACGGTAACATGT
CAAGCGCTTGTGTCCTGTTCATCCTTGACGAGATGAGAAAGAAGTCTGCT
GAGGAAGCGAAAGCCACCACCGGCGAAGGGCTAGATTGGGGTGTGCTGTT
CGGGTTCGGGCCGGGGCTCACCGTCGAGACCGTTGTGCTGCACAGTGTCC
CCATCAAAGCTTGAAGTGAGAACTCCATCAGTATGTTTAGTAGTTCAGTA
ACTTTATGTTGTATGCTTTCACTCTTGAATTATTGGTTGATCGTGTGAAG
GTTTAGTTTTGTCAATTGAATTTAAGGCATCGTACCTTTTCTCCAAAAAA
AAAAAAAAAAAAAAAAAAAAAA
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