CK936382

Overview
NameCK936382
Unique NameCK936382
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length822
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936382 vs. ExPASy Swiss-Prot
Match: CHSY_HYPAN (Chalcone synthase OS=Hypericum androsaemum PE=1 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 1.977e-68
Identity = 126/162 (77.78%), Postives = 139/162 (85.80%), Query Frame = 2
Query:  170 PDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 655
            P   VE+PL++LVS +QTILPDS+GAIDGHLREVGLTFHLLKDVPGLISKN+EKSL+EAF P+GISDWNS+FWIAHPGGPAILDQV            ATR VLSEYGNMSSACVLFILDEMR+KS E+   TTGEG++WGVLFGFGPGLTVETVVLHSV I
Sbjct:  228 PIPEVEKPLFELVSAAQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNVEKSLTEAFKPLGISDWNSLFWIAHPGGPAILDQVEAKLSLKPEKLRATRHVLSEYGNMSSACVLFILDEMRRKSKEDGLKTTGEGIEWGVLFGFGPGLTVETVVLHSVAI 389          
BLAST of CK936382 vs. ExPASy Swiss-Prot
Match: CHS1_DAUCA (Chalcone synthase 1 OS=Daucus carota GN=CHS1 PE=2 SV=1)

HSP 1 Score: 258.84 bits (660), Expect = 2.583e-68
Identity = 126/161 (78.26%), Postives = 137/161 (85.09%), Query Frame = 2
Query:  170 PDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVP 652
            P   +E+PL+++VS +QTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNI KSL EAF P+GISDWNSIFWIAHPGGPAILDQV            +TRQVL +YGNMSSACVLFILDEMRK SA++   TTGEGLDWGVLFGFGPGLTVETVVLHSVP
Sbjct:  228 PVIGIEKPLFEIVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIRKSLVEAFKPLGISDWNSIFWIAHPGGPAILDQVETELSLKPEKLKSTRQVLRDYGNMSSACVLFILDEMRKASAKDGHRTTGEGLDWGVLFGFGPGLTVETVVLHSVP 388          
BLAST of CK936382 vs. ExPASy Swiss-Prot
Match: CHSJ_PETHY (Chalcone synthase J OS=Petunia hybrida GN=CHSJ PE=2 SV=2)

HSP 1 Score: 258.455 bits (659), Expect = 3.373e-68
Identity = 128/160 (80.00%), Postives = 137/160 (85.62%), Query Frame = 2
Query:  170 PDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSV 649
            P   VERPL++LVS SQT+LPDS+GAIDGHLREVGLTFHLLKDVPGLISKNI+KSL EAF P+GISDWNSIFWIAHPGGPAILDQV            ATR VLSEYGNMSSACVLFILDEMRK S++E   TTGEGL+WGVLFGFGPGLTVETVVLHSV
Sbjct:  228 PLPGVERPLFELVSASQTLLPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIQKSLVEAFQPLGISDWNSIFWIAHPGGPAILDQVELKLGLKPEKLRATRHVLSEYGNMSSACVLFILDEMRKASSKEGLGTTGEGLEWGVLFGFGPGLTVETVVLHSV 387          
BLAST of CK936382 vs. ExPASy Swiss-Prot
Match: CHS2_CAMSI (Chalcone synthase 2 OS=Camellia sinensis GN=CHS2 PE=2 SV=1)

HSP 1 Score: 258.07 bits (658), Expect = 4.405e-68
Identity = 127/160 (79.38%), Postives = 137/160 (85.62%), Query Frame = 2
Query:  170 PDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSV 649
            P   VE+PL++LVS +QTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSL+EAF P+ I+DWNS+FWIAHPGGPAILDQV            ATR VLSEYGNMSSACVLFILDEMRK SA++   TTGEGLDWGVLFGFGPGLTVETVVLHSV
Sbjct:  228 PIPEVEKPLFELVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLNEAFQPLNITDWNSLFWIAHPGGPAILDQVELKLALKPEKLRATRHVLSEYGNMSSACVLFILDEMRKSSAKKGLKTTGEGLDWGVLFGFGPGLTVETVVLHSV 387          
BLAST of CK936382 vs. ExPASy Swiss-Prot
Match: CHSE_IPOPU (Chalcone synthase E OS=Ipomoea purpurea GN=CHSE PE=2 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 5.753e-68
Identity = 127/160 (79.38%), Postives = 137/160 (85.62%), Query Frame = 2
Query:  170 PDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSV 649
            PD  +ERPL+QLVS +QTILPDS GAIDGHLREVGLTFHLLKDVPGLISK+IEKSL+EAF P+GI DWNS+FWIAHPGGPAILDQV            ATR VLSEYGNMSSACVLFILDEMRK S++E   TTGEGL+WGVLFGFGPGLTVETVVLHSV
Sbjct:  228 PDPDLERPLFQLVSAAQTILPDSGGAIDGHLREVGLTFHLLKDVPGLISKHIEKSLNEAFQPLGIRDWNSLFWIAHPGGPAILDQVEEKLELKPEKLRATRHVLSEYGNMSSACVLFILDEMRKASSKEGLNTTGEGLEWGVLFGFGPGLTVETVVLHSV 387          
BLAST of CK936382 vs. ExPASy Swiss-Prot
Match: CHSE_IPONI (Chalcone synthase E OS=Ipomoea nil GN=CHSE PE=2 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 5.753e-68
Identity = 127/160 (79.38%), Postives = 137/160 (85.62%), Query Frame = 2
Query:  170 PDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSV 649
            PD  +ERPL+QLVS +QTILPDS GAIDGHLREVGLTFHLLKDVPGLISK+IEKSL+EAF P+GI DWNS+FWIAHPGGPAILDQV            ATR VLSEYGNMSSACVLFILDEMRK S++E   TTGEGL+WGVLFGFGPGLTVETVVLHSV
Sbjct:  228 PDPDLERPLFQLVSAAQTILPDSGGAIDGHLREVGLTFHLLKDVPGLISKHIEKSLNEAFQPLGIHDWNSLFWIAHPGGPAILDQVEEKLELKPEKLRATRHVLSEYGNMSSACVLFILDEMRKASSKEGLNTTGEGLEWGVLFGFGPGLTVETVVLHSV 387          
BLAST of CK936382 vs. ExPASy Swiss-Prot
Match: CHSA_PETHY (Chalcone synthase A OS=Petunia hybrida GN=CHSA PE=2 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 5.753e-68
Identity = 127/160 (79.38%), Postives = 136/160 (85.00%), Query Frame = 2
Query:  170 PDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSV 649
            P   VERPL++LVS +QT+LPDS GAIDGHLREVGLTFHLLKDVPGLISKNIEKSL EAF P+GISDWNS+FWIAHPGGPAILDQV            ATR VLS+YGNMSSACVLFILDEMRK SA+E   TTGEGL+WGVLFGFGPGLTVETVVLHSV
Sbjct:  228 PIPGVERPLFELVSAAQTLLPDSHGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLEEAFKPLGISDWNSLFWIAHPGGPAILDQVEIKLGLKPEKLKATRNVLSDYGNMSSACVLFILDEMRKASAKEGLGTTGEGLEWGVLFGFGPGLTVETVVLHSV 387          
BLAST of CK936382 vs. ExPASy Swiss-Prot
Match: CHS8_BROFI (Chalcone synthase 8 OS=Bromheadia finlaysoniana GN=CHS8 PE=2 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 5.753e-68
Identity = 123/162 (75.93%), Postives = 140/162 (86.42%), Query Frame = 2
Query:  170 PDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 655
            PD++ ERPL+QLVS SQTILP+S+GAIDGHLRE+GLTFHLLKDVPGLISKNI+K L +AF P+G+ DWNSIFWIAHPGGPAILDQV            A+R VL+EYGNMSSACVLFILDEMR++SAE  +ATTGEGL+WGVLFGFGPGLTVET+VL SVPI
Sbjct:  229 PDSATERPLFQLVSASQTILPESEGAIDGHLREIGLTFHLLKDVPGLISKNIQKCLLDAFKPLGVHDWNSIFWIAHPGGPAILDQVEIKLGLKAEKLAASRNVLAEYGNMSSACVLFILDEMRRRSAEAGQATTGEGLEWGVLFGFGPGLTVETIVLRSVPI 390          
BLAST of CK936382 vs. ExPASy Swiss-Prot
Match: CHS4_BROFI (Chalcone synthase 4 OS=Bromheadia finlaysoniana GN=CHS4 PE=2 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 5.753e-68
Identity = 123/162 (75.93%), Postives = 140/162 (86.42%), Query Frame = 2
Query:  170 PDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 655
            PD++ ERPL+QLVS SQTILP+S+GAIDGHLRE+GLTFHLLKDVPGLISKNI+K L +AF P+G+ DWNSIFWIAHPGGPAILDQV            A+R VL+EYGNMSSACVLFILDEMR++SAE  +ATTGEGL+WGVLFGFGPGLTVET+VL SVPI
Sbjct:  229 PDSATERPLFQLVSASQTILPESEGAIDGHLREIGLTFHLLKDVPGLISKNIQKCLLDAFKPLGVHDWNSIFWIAHPGGPAILDQVEIKLGLKAEKLAASRSVLAEYGNMSSACVLFILDEMRRRSAEAGQATTGEGLEWGVLFGFGPGLTVETIVLRSVPI 390          
BLAST of CK936382 vs. ExPASy Swiss-Prot
Match: CHS3_BROFI (Chalcone synthase 3 OS=Bromheadia finlaysoniana GN=CHS3 PE=2 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 5.753e-68
Identity = 123/162 (75.93%), Postives = 140/162 (86.42%), Query Frame = 2
Query:  170 PDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 655
            PD++ ERPL+QLVS SQTILP+S+GAIDGHLRE+GLTFHLLKDVPGLISKNI+K L +AF P+G+ DWNSIFWIAHPGGPAILDQV            A+R VL+EYGNMSSACVLFILDEMR++SAE  +ATTGEGL+WGVLFGFGPGLTVET+VL SVPI
Sbjct:  229 PDSATERPLFQLVSASQTILPESEGAIDGHLREIGLTFHLLKDVPGLISKNIQKCLLDAFKPLGVHDWNSIFWIAHPGGPAILDQVEIKLGLKAEKLAASRNVLAEYGNMSSACVLFILDEMRRRSAEAGQATTGEGLEWGVLFGFGPGLTVETIVLRSVPI 390          
The following BLAST results are available for this feature:
BLAST of CK936382 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
CHSY_HYPAN1.977e-6877.78Chalcone synthase OS=Hypericum androsaemum PE=1 SV... [more]
CHS1_DAUCA2.583e-6878.26Chalcone synthase 1 OS=Daucus carota GN=CHS1 PE=2 ... [more]
CHSJ_PETHY3.373e-6880.00Chalcone synthase J OS=Petunia hybrida GN=CHSJ PE=... [more]
CHS2_CAMSI4.405e-6879.38Chalcone synthase 2 OS=Camellia sinensis GN=CHS2 P... [more]
CHSE_IPOPU5.753e-6879.38Chalcone synthase E OS=Ipomoea purpurea GN=CHSE PE... [more]
CHSE_IPONI5.753e-6879.38Chalcone synthase E OS=Ipomoea nil GN=CHSE PE=2 SV... [more]
CHSA_PETHY5.753e-6879.38Chalcone synthase A OS=Petunia hybrida GN=CHSA PE=... [more]
CHS8_BROFI5.753e-6875.93Chalcone synthase 8 OS=Bromheadia finlaysoniana GN... [more]
CHS4_BROFI5.753e-6875.93Chalcone synthase 4 OS=Bromheadia finlaysoniana GN... [more]
CHS3_BROFI5.753e-6875.93Chalcone synthase 3 OS=Bromheadia finlaysoniana GN... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004382_H12 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IVF_H12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936382 ID=CK936382; Name=CK936382; organism=Citrus sinensis; type=EST; length=822bp
GGGGAGTGCACACTCACCAAGCACGAGCCTCAAAACATATTCATTACGGG
TTTAACTTGCAATGGCAACCGTTCAAGAGATCAGAAACGCTCAGCGTGCC
GACGGCCCGGCCATCGTCCTCGCCATCGGTACGGCCACGCCTGCCCACAG
TGTCAACCAGGCTGATTATCCTGACACGTCGGTCGAGCGTCCGTTGTATC
AGCTTGTGTCGACTTCGCAGACGATCCTCCCTGACTCTGACGGTGCAATT
GACGGACACTTGCGCGAAGTCGGTCTCACTTTCCATTTGCTTAAAGACGT
CCCCGGCTTGATCTCAAAGAATATAGAGAAAAGCCTGTCGGAAGCGTTCG
CCCCGGTTGGCATCAGCGACTGGAACTCGATATTCTGGATCGCTCACCCC
GGTGGGCCCGCAATTCTGGACCAAGTGGAGTCTAAACTCGGCCTCAAAGA
GGAGAAGCTGAAGGCCACACGTCAAGTGTTGAGTGAGTACGGTAACATGT
CAAGCGCTTGTGTCCTGTTCATCCTTGACGAGATGAGAAAGAAGTCTGCT
GAGGAAGCGAAAGCCACCACCGGCGAAGGGCTAGATTGGGGTGTGCTGTT
CGGGTTCGGGCCGGGGCTCACCGTCGAGACCGTTGTGCTGCACAGTGTCC
CCATCAAAGCTTGAAGTGAGAACTCCATCAGTATGTTTAGTAGTTCAGTA
ACTTTATGTTGTATGCTTTCACTCTTGAATTATTGGTTGATCGTGTGAAG
GTTTAGTTTTGTCAATTGAATTTAAGGCATCGTACCTTTTCTCCAAAAAA
AAAAAAAAAAAAAAAAAAAAAA
back to top