CK936382

Overview
NameCK936382
Unique NameCK936382
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length822
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936382 vs. ExPASy Swiss-Prot
Match: CHSB_PEA (Chalcone synthase 1B OS=Pisum sativum GN=CHS-1B PE=3 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 1.085e-66
Identity = 126/160 (78.75%), Postives = 137/160 (85.62%), Query Frame = 2
Query:  170 PDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSV 649
            P   VE+PL++LV T+QTILPDS+GAIDGHLREVGLTFHLLKDVPGLISKNIEK+L EAF P+GISD+NS+FWIAHPGGPAILDQV            ATR VLSEYGNMSSACVLFILDEMR+KS EE   TTGEGL+WGVLFGFGPGLTVETVVLHSV
Sbjct:  228 PLPQVEKPLFELVWTAQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIEKALVEAFQPLGISDYNSLFWIAHPGGPAILDQVEAKLSLKQRKMQATRHVLSEYGNMSSACVLFILDEMRRKSKEEQLGTTGEGLEWGVLFGFGPGLTVETVVLHSV 387          
BLAST of CK936382 vs. ExPASy Swiss-Prot
Match: CHS5_SOYBN (Chalcone synthase 5 OS=Glycine max GN=CHS5 PE=3 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 2.417e-66
Identity = 126/158 (79.75%), Postives = 135/158 (85.44%), Query Frame = 2
Query:  182 VERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 655
            VE+PL+QLV T+QTILPDS+GAIDGHLREVGLTFHLLKDVPGLISKNIEK+L EAF P+GISD+NSIFWIAHPGGPAILDQV            ATR VLSEYGNMSSACVLFILD+MRKKS E    TTGEGLDWGVLFGFGPGLTVETVVL SV +
Sbjct:  231 VEKPLFQLVWTAQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIEKALVEAFQPLGISDYNSIFWIAHPGGPAILDQVEAKLGLKPEKMEATRHVLSEYGNMSSACVLFILDQMRKKSIENGLGTTGEGLDWGVLFGFGPGLTVETVVLRSVTV 388          
BLAST of CK936382 vs. ExPASy Swiss-Prot
Match: CHS1_SOYBN (Chalcone synthase 1 OS=Glycine max GN=CHS1 PE=3 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 3.157e-66
Identity = 126/158 (79.75%), Postives = 135/158 (85.44%), Query Frame = 2
Query:  182 VERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 655
            VE+PL+QLV T+QTILPDS+GAIDGHLREVGLTFHLLKDVPGLISKNIEK+L EAF P+GISD+NSIFWIAHPGGPAILDQV            ATR VLSEYGNMSSACVLFILD+MRKKS E    TTGEGLDWGVLFGFGPGLTVETVVL SV +
Sbjct:  231 VEKPLFQLVWTAQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIEKALVEAFQPLGISDYNSIFWIAHPGGPAILDQVEAKLGLKPEKMEATRHVLSEYGNMSSACVLFILDQMRKKSIENGLGTTGEGLDWGVLFGFGPGLTVETVVLRSVTL 388          
BLAST of CK936382 vs. ExPASy Swiss-Prot
Match: CHS7_SOYBN (Chalcone synthase 7 OS=Glycine max GN=CHS7 PE=3 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 9.185e-66
Identity = 123/162 (75.93%), Postives = 136/162 (83.95%), Query Frame = 2
Query:  170 PDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 655
            P   VE+PLY+LV T+QTI PDS+GAIDGHLREVGLTFHLLKDVPG++SKNI+K+L EAF P+ ISD+NSIFWIAHPGGPAILDQV            ATR VLSEYGNMSSACVLFILDEMR+KSAE    TTGEGL+WGVLFGFGPGLT+ETVVLHSV I
Sbjct:  228 PIPQVEKPLYELVWTAQTIAPDSEGAIDGHLREVGLTFHLLKDVPGIVSKNIDKALFEAFNPLNISDYNSIFWIAHPGGPAILDQVEQKLGLKPEKMKATRDVLSEYGNMSSACVLFILDEMRRKSAENGHKTTGEGLEWGVLFGFGPGLTIETVVLHSVAI 389          
BLAST of CK936382 vs. ExPASy Swiss-Prot
Match: CHSD_IPONI (Chalcone synthase D OS=Ipomoea nil GN=CHSD PE=2 SV=1)

HSP 1 Score: 249.595 bits (636), Expect = 1.567e-65
Identity = 126/184 (68.48%), Postives = 139/184 (75.54%), Query Frame = 2
Query:  101 DGPAIVLAIGTATPAHSVNQADYPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVP 652
            DG A ++     TPA             E+PL+QLVS +QT+ PDS GAIDGHLREVGLTFHLLKDVP ++S NIEK LSEAF P+GISDWNSIFWIAHPGGPAILDQV            ATR VLSEYGNMSSACVLFILDEMRK S+ +   TTGEGL+WGVLFGFGPGLT+ETVVLHSVP
Sbjct:  217 DGAAAIIVGSDPTPA-------------EKPLFQLVSAAQTLAPDSCGAIDGHLREVGLTFHLLKDVPSIVSNNIEKCLSEAFNPLGISDWNSIFWIAHPGGPAILDQVEDKLGLKPEKLRATRHVLSEYGNMSSACVLFILDEMRKASSNDGLGTTGEGLEWGVLFGFGPGLTIETVVLHSVP 387          
BLAST of CK936382 vs. ExPASy Swiss-Prot
Match: CHS3_SOYBN (Chalcone synthase 3 OS=Glycine max GN=CHS3 PE=3 SV=1)

HSP 1 Score: 249.595 bits (636), Expect = 1.567e-65
Identity = 125/158 (79.11%), Postives = 134/158 (84.81%), Query Frame = 2
Query:  182 VERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 655
            VE+PL+QLV T+QTILPDS+GAIDGHL EVGLTFHLLKDVPGLISKNIEK+L EAF P+GISD+NSIFWIAHPGGPAILDQV            ATR VLSEYGNMSSACVLFILD+MRKKS E    TTGEGLDWGVLFGFGPGLTVETVVL SV +
Sbjct:  231 VEKPLFQLVWTAQTILPDSEGAIDGHLGEVGLTFHLLKDVPGLISKNIEKALVEAFQPLGISDYNSIFWIAHPGGPAILDQVEAKLGLKPEKMEATRHVLSEYGNMSSACVLFILDQMRKKSIENGLGTTGEGLDWGVLFGFGPGLTVETVVLRSVTV 388          
BLAST of CK936382 vs. ExPASy Swiss-Prot
Match: CHS7_IPOBA (Chalcone synthase DIII OS=Ipomoea batatas GN=CHS-DIII PE=2 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 2.046e-65
Identity = 127/186 (68.28%), Postives = 139/186 (74.73%), Query Frame = 2
Query:  101 DGPAIVLAIGTATPAHSVNQADYPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPIK 658
            DG A V+     TPA             E+PL+QLVS +QT+ PDS GAIDGHLREVGLTFHLLKDVP ++S NIEK L EAF P+GISDWNS+FWIAHPGGPAILDQV            ATR VLSEYGNMSSACVLFILDEMRK S+     TTGEGL+WGVLFGFGPGLT+ETVVLHSVPIK
Sbjct:  217 DGAAAVIVGADPTPA-------------EKPLFQLVSAAQTLAPDSCGAIDGHLREVGLTFHLLKDVPSVVSNNIEKCLFEAFNPLGISDWNSVFWIAHPGGPAILDQVEDKLGLKPEKLRATRHVLSEYGNMSSACVLFILDEMRKASSNAGLGTTGEGLEWGVLFGFGPGLTIETVVLHSVPIK 389          
BLAST of CK936382 vs. ExPASy Swiss-Prot
Match: CHS2_IPOBA (Chalcone synthase LF2 OS=Ipomoea batatas GN=CHS-LF2 PE=2 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 2.046e-65
Identity = 127/186 (68.28%), Postives = 139/186 (74.73%), Query Frame = 2
Query:  101 DGPAIVLAIGTATPAHSVNQADYPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPIK 658
            DG A V+     TPA             E+PL+QLVS +QT+ PDS GAIDGHLREVGLTFHLLKDVP ++S NIEK L EAF P+GISDWNS+FWIAHPGGPAILDQV            ATR VLSEYGNMSSACVLFILDEMRK S+     TTGEGL+WGVLFGFGPGLT+ETVVLHSVPIK
Sbjct:  217 DGAAAVIVGADPTPA-------------EKPLFQLVSAAQTLAPDSCGAIDGHLREVGLTFHLLKDVPSVVSNNIEKCLFEAFNPLGISDWNSVFWIAHPGGPAILDQVEDKLGLKPEKLRATRHVLSEYGNMSSACVLFILDEMRKASSNAGLGTTGEGLEWGVLFGFGPGLTIETVVLHSVPIK 389          
BLAST of CK936382 vs. ExPASy Swiss-Prot
Match: CHS6_MEDSA (Chalcone synthase 6-4 (Fragment) OS=Medicago sativa GN=CHS6-4 PE=2 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 5.954e-65
Identity = 118/162 (72.84%), Postives = 137/162 (84.57%), Query Frame = 2
Query:  170 PDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 655
            P   +E+P++++V T+QTI PDS+GAIDGHLRE GLTFHLLKDVPG++SKNI+K+L EAF P+ ISD+NSIFWIAHPGGPAILDQV            ATR+VLSEYGNMSSACVLFILDEMRKKSA++   TTGEGLDWGVLFGFGPGLT+ETVVLHSV +
Sbjct:  124 PIPEIEKPIFEMVWTAQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNIDKALVEAFQPLNISDYNSIFWIAHPGGPAILDQVEQKLGLKPEKMKATREVLSEYGNMSSACVLFILDEMRKKSAQQGLKTTGEGLDWGVLFGFGPGLTIETVVLHSVAL 285          
BLAST of CK936382 vs. ExPASy Swiss-Prot
Match: CHS9_MEDSA (Chalcone synthase 9 OS=Medicago sativa GN=CHS9 PE=2 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 7.776e-65
Identity = 119/162 (73.46%), Postives = 136/162 (83.95%), Query Frame = 2
Query:  170 PDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 655
            P   +E+P++++V T+QTI PDS+GAIDGHLRE GLTFHLLKDVPG++SKNI+K+L EAF P+ ISD+NSIFWIAHPGGPAILDQV            ATR+VLSEYGNMSSACVLFILDEMRKKSA+    TTGEGLDWGVLFGFGPGLT+ETVVLHSV I
Sbjct:  228 PIPEIEKPIFEMVWTAQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNIDKALVEAFQPLNISDYNSIFWIAHPGGPAILDQVEQKLGLKPEKMKATREVLSEYGNMSSACVLFILDEMRKKSAQAGLKTTGEGLDWGVLFGFGPGLTIETVVLHSVAI 389          
The following BLAST results are available for this feature:
BLAST of CK936382 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
CHSB_PEA1.085e-6678.75Chalcone synthase 1B OS=Pisum sativum GN=CHS-1B PE... [more]
CHS5_SOYBN2.417e-6679.75Chalcone synthase 5 OS=Glycine max GN=CHS5 PE=3 SV... [more]
CHS1_SOYBN3.157e-6679.75Chalcone synthase 1 OS=Glycine max GN=CHS1 PE=3 SV... [more]
CHS7_SOYBN9.185e-6675.93Chalcone synthase 7 OS=Glycine max GN=CHS7 PE=3 SV... [more]
CHSD_IPONI1.567e-6568.48Chalcone synthase D OS=Ipomoea nil GN=CHSD PE=2 SV... [more]
CHS3_SOYBN1.567e-6579.11Chalcone synthase 3 OS=Glycine max GN=CHS3 PE=3 SV... [more]
CHS7_IPOBA2.046e-6568.28Chalcone synthase DIII OS=Ipomoea batatas GN=CHS-D... [more]
CHS2_IPOBA2.046e-6568.28Chalcone synthase LF2 OS=Ipomoea batatas GN=CHS-LF... [more]
CHS6_MEDSA5.954e-6572.84Chalcone synthase 6-4 (Fragment) OS=Medicago sativ... [more]
CHS9_MEDSA7.776e-6573.46Chalcone synthase 9 OS=Medicago sativa GN=CHS9 PE=... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004382_H12 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IVF_H12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936382 ID=CK936382; Name=CK936382; organism=Citrus sinensis; type=EST; length=822bp
GGGGAGTGCACACTCACCAAGCACGAGCCTCAAAACATATTCATTACGGG
TTTAACTTGCAATGGCAACCGTTCAAGAGATCAGAAACGCTCAGCGTGCC
GACGGCCCGGCCATCGTCCTCGCCATCGGTACGGCCACGCCTGCCCACAG
TGTCAACCAGGCTGATTATCCTGACACGTCGGTCGAGCGTCCGTTGTATC
AGCTTGTGTCGACTTCGCAGACGATCCTCCCTGACTCTGACGGTGCAATT
GACGGACACTTGCGCGAAGTCGGTCTCACTTTCCATTTGCTTAAAGACGT
CCCCGGCTTGATCTCAAAGAATATAGAGAAAAGCCTGTCGGAAGCGTTCG
CCCCGGTTGGCATCAGCGACTGGAACTCGATATTCTGGATCGCTCACCCC
GGTGGGCCCGCAATTCTGGACCAAGTGGAGTCTAAACTCGGCCTCAAAGA
GGAGAAGCTGAAGGCCACACGTCAAGTGTTGAGTGAGTACGGTAACATGT
CAAGCGCTTGTGTCCTGTTCATCCTTGACGAGATGAGAAAGAAGTCTGCT
GAGGAAGCGAAAGCCACCACCGGCGAAGGGCTAGATTGGGGTGTGCTGTT
CGGGTTCGGGCCGGGGCTCACCGTCGAGACCGTTGTGCTGCACAGTGTCC
CCATCAAAGCTTGAAGTGAGAACTCCATCAGTATGTTTAGTAGTTCAGTA
ACTTTATGTTGTATGCTTTCACTCTTGAATTATTGGTTGATCGTGTGAAG
GTTTAGTTTTGTCAATTGAATTTAAGGCATCGTACCTTTTCTCCAAAAAA
AAAAAAAAAAAAAAAAAAAAAA
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