CK936382

Overview
NameCK936382
Unique NameCK936382
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length822
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936382 vs. ExPASy Swiss-Prot
Match: CHS6_PEA (Chalcone synthase 6 OS=Pisum sativum GN=CHS6 PE=2 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 2.262e-64
Identity = 118/162 (72.84%), Postives = 135/162 (83.33%), Query Frame = 2
Query:  170 PDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 655
            P   +E+P++++V T+QTI PDS+GAIDGHLRE GLTFHLLKDVPG++SKNI K+L EAF P+ I D+NSIFWIAHPGGPAILDQV            ATR+VLSEYGNMSSACVLFILDEMRKKSA++   TTGEGLDWGVLFGFGPGLT+ETVVLHSV I
Sbjct:  228 PLPEIEKPIFEMVWTAQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNINKALVEAFQPLNIDDYNSIFWIAHPGGPAILDQVEEKLGLKPEKMKATREVLSEYGNMSSACVLFILDEMRKKSAQQGLKTTGEGLDWGVLFGFGPGLTIETVVLHSVAI 389          
BLAST of CK936382 vs. ExPASy Swiss-Prot
Match: CHSA_PEA (Chalcone synthase 1A OS=Pisum sativum GN=CHS-1A PE=3 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 2.955e-64
Identity = 124/174 (71.26%), Postives = 139/174 (79.89%), Query Frame = 2
Query:  128 GTATPAHSVNQADYPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSV 649
            G    A  V     PD  VE+PL++LV T+QTI+PDS+GAIDGHLRE GLTFHLLKDVP L+SKNIEK+L EAF P+ ISD+NSIFWIAHPGGPAILDQV            ATR VLSEYGNMSSACVLFILDEMR+KS E+  ATTGEGL+WGVLFGFGPGLTVETV+LHS+
Sbjct:  216 GDGAAAVIVGSDPLPD--VEKPLFELVWTAQTIVPDSEGAIDGHLREAGLTFHLLKDVPSLVSKNIEKALVEAFQPLNISDYNSIFWIAHPGGPAILDQVEAKLGLKQRKMQATRHVLSEYGNMSSACVLFILDEMRRKSKEDGLATTGEGLEWGVLFGFGPGLTVETVLLHSM 387          
BLAST of CK936382 vs. ExPASy Swiss-Prot
Match: CHS7_MEDSA (Chalcone synthase (Fragment) OS=Medicago sativa GN=CHSII PE=2 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 2.955e-64
Identity = 118/162 (72.84%), Postives = 136/162 (83.95%), Query Frame = 2
Query:  170 PDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 655
            P   +E+P++++V T+QTI PDS+GAIDGHLRE GLTFHLLKDVPG++SKNI K+L EAF P+GISD+NSIFWIAHPGGPAILDQV            ATR+VLSEYGNMSSACVLFILDEMRKKSA++   TTGEGL+WGVLFGFGPGLT+ETVVL SV I
Sbjct:  104 PVPEIEKPIFEMVWTAQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNINKALVEAFEPLGISDYNSIFWIAHPGGPAILDQVEQKLALKPEKMKATREVLSEYGNMSSACVLFILDEMRKKSAQDGLKTTGEGLEWGVLFGFGPGLTIETVVLRSVTI 265          
BLAST of CK936382 vs. ExPASy Swiss-Prot
Match: CHS6_SOYBN (Chalcone synthase 6 OS=Glycine max GN=CHS6 PE=3 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 2.955e-64
Identity = 121/157 (77.07%), Postives = 133/157 (84.71%), Query Frame = 2
Query:  185 ERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 655
            E+PL++LV T+QTILPDS+GAIDGHLREVGLTFHLLKDVPGLISKNI+K+L EAF P+GI D+NSIFWIAHPGGPAILDQV            ATR VLSEYGNMSSACVLFILD+MRKKS E    TTGEGL+WGVLFGFGPGLTVETVVL SV +
Sbjct:  232 EKPLFELVWTAQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIQKALVEAFQPLGIDDYNSIFWIAHPGGPAILDQVEAKLGLKPEKMEATRHVLSEYGNMSSACVLFILDQMRKKSIENGLGTTGEGLEWGVLFGFGPGLTVETVVLRSVTV 388          
BLAST of CK936382 vs. ExPASy Swiss-Prot
Match: CHS5_MEDSA (Chalcone synthase 4-2 OS=Medicago sativa GN=CHS4-2 PE=2 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 2.955e-64
Identity = 118/162 (72.84%), Postives = 136/162 (83.95%), Query Frame = 2
Query:  170 PDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 655
            P   +E+P++++V T+QTI PDS+GAIDGHLRE GLTFHLLKDVPG++SKNI K+L EAF P+GISD+NSIFWIAHPGGPAILDQV            ATR+VLSEYGNMSSACVLFILDEMRKKSA++   TTGEGL+WGVLFGFGPGLT+ETVVL SV I
Sbjct:  228 PVPEIEKPIFEMVWTAQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNINKALVEAFEPLGISDYNSIFWIAHPGGPAILDQVEQKLALKPEKMKATREVLSEYGNMSSACVLFILDEMRKKSAQDGLKTTGEGLEWGVLFGFGPGLTIETVVLRSVAI 389          
BLAST of CK936382 vs. ExPASy Swiss-Prot
Match: CHS1_PEA (Chalcone synthase 1 OS=Pisum sativum GN=CHS1 PE=2 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 2.955e-64
Identity = 117/162 (72.22%), Postives = 137/162 (84.57%), Query Frame = 2
Query:  170 PDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 655
            P   +E+P++++V T+QTI PDS+GAIDGHLRE GLTFHLLKDVPG++SKNI+K+L EAF P+GISD+NSIFWIAHPGGPAILDQV            ATR+VLSEYGNMSSACVLFILD+MRKKS ++   TTGEGL+WGVLFGFGPGLT+ETVVLHSV I
Sbjct:  228 PVPEIEKPIFEMVWTAQTIAPDSEGAIDGHLREQGLTFHLLKDVPGIVSKNIDKALVEAFKPLGISDYNSIFWIAHPGGPAILDQVEQKLGLKPEKMRATREVLSEYGNMSSACVLFILDQMRKKSTQDGLNTTGEGLEWGVLFGFGPGLTIETVVLHSVAI 389          
BLAST of CK936382 vs. ExPASy Swiss-Prot
Match: CHS1_CICAR (Chalcone synthase 1 OS=Cicer arietinum GN=CHS1 PE=2 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 2.955e-64
Identity = 117/162 (72.22%), Postives = 137/162 (84.57%), Query Frame = 2
Query:  170 PDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 655
            P   +E+P++++V T+QTI PDS+GAIDGHLRE GLTFHLLKDVPG++SKNI+K+L EAF P+ ISD+NSIFWIAHPGGPAILDQV            ATR+VLSEYGNMSSACVLFILDEMR+KSA++   TTGEGL+WGVLFGFGPGLT+ETVVLHSV I
Sbjct:  228 PIPEIEKPIFEMVWTAQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNIDKALIEAFQPLNISDYNSIFWIAHPGGPAILDQVEEKLALKPEKMRATREVLSEYGNMSSACVLFILDEMRRKSAKDGLKTTGEGLEWGVLFGFGPGLTIETVVLHSVAI 389          
BLAST of CK936382 vs. ExPASy Swiss-Prot
Match: CHS7_PICMA (Chalcone synthase 7 OS=Picea mariana GN=CSF7 PE=2 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 3.859e-64
Identity = 124/163 (76.07%), Postives = 134/163 (82.21%), Query Frame = 2
Query:  170 PDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPIK 658
            P   VE+P ++L+ T+QTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSL EAF   GISDWN +FWIAHPGGPAILDQV            ATRQVLSEYGNMSSACV FILDEMRK S E+  +TTGEGLD GVLFGFGPGLTVETVVL SVP++
Sbjct:  233 PIPQVEKPCFELMWTAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFQQFGISDWNQLFWIAHPGGPAILDQVEAKLNLDPKKLRATRQVLSEYGNMSSACVHFILDEMRKSSNEKGCSTTGEGLDVGVLFGFGPGLTVETVVLKSVPLQ 395          
BLAST of CK936382 vs. ExPASy Swiss-Prot
Match: CHS1_IPOBA (Chalcone synthase LF1 OS=Ipomoea batatas GN=CHS-LF1 PE=2 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 3.859e-64
Identity = 125/186 (67.20%), Postives = 138/186 (74.19%), Query Frame = 2
Query:  101 DGPAIVLAIGTATPAHSVNQADYPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPIK 658
            DG A V+     TPA             E+PL+QLVS +QT+ P+S GAIDGHLREVGLTFHLLKDVP ++S  IEK L EAF P+GISDWNS+FWIAHPGGPAILDQV            ATR VLSEYGNMSSACVLFILDEMRK S+     TTGEGL+WGVLFGFGPGLT+ETVVLHSVPIK
Sbjct:  217 DGAAAVIVGADPTPA-------------EKPLFQLVSAAQTLAPNSCGAIDGHLREVGLTFHLLKDVPSVVSNKIEKCLFEAFNPLGISDWNSVFWIAHPGGPAILDQVEDKLGLKPEKLRATRHVLSEYGNMSSACVLFILDEMRKASSNAGLGTTGEGLEWGVLFGFGPGLTIETVVLHSVPIK 389          
BLAST of CK936382 vs. ExPASy Swiss-Prot
Match: CHS4_MEDSA (Chalcone synthase 4 OS=Medicago sativa GN=CHS4 PE=2 SV=2)

HSP 1 Score: 244.588 bits (623), Expect = 5.040e-64
Identity = 117/162 (72.22%), Postives = 136/162 (83.95%), Query Frame = 2
Query:  170 PDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 655
            P   +E+P++++V T+QTI PDS+GAIDGHLRE GLTFHLLKDVPG++SKNI+K+L EAF P+GISD+NSIFWIAHPGGPAILDQV            ATR+VLSEYGNMSSACVLFILDEMRKKS ++   TTGEGL+WGVLFGFGPGLT+ETVVL SV I
Sbjct:  228 PVPEIEKPIFEMVWTAQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNIDKALVEAFQPLGISDYNSIFWIAHPGGPAILDQVEQKLALKPEKMRATREVLSEYGNMSSACVLFILDEMRKKSTQDGLKTTGEGLEWGVLFGFGPGLTIETVVLRSVAI 389          
The following BLAST results are available for this feature:
BLAST of CK936382 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
CHS6_PEA2.262e-6472.84Chalcone synthase 6 OS=Pisum sativum GN=CHS6 PE=2 ... [more]
CHSA_PEA2.955e-6471.26Chalcone synthase 1A OS=Pisum sativum GN=CHS-1A PE... [more]
CHS7_MEDSA2.955e-6472.84Chalcone synthase (Fragment) OS=Medicago sativa GN... [more]
CHS6_SOYBN2.955e-6477.07Chalcone synthase 6 OS=Glycine max GN=CHS6 PE=3 SV... [more]
CHS5_MEDSA2.955e-6472.84Chalcone synthase 4-2 OS=Medicago sativa GN=CHS4-2... [more]
CHS1_PEA2.955e-6472.22Chalcone synthase 1 OS=Pisum sativum GN=CHS1 PE=2 ... [more]
CHS1_CICAR2.955e-6472.22Chalcone synthase 1 OS=Cicer arietinum GN=CHS1 PE=... [more]
CHS7_PICMA3.859e-6476.07Chalcone synthase 7 OS=Picea mariana GN=CSF7 PE=2 ... [more]
CHS1_IPOBA3.859e-6467.20Chalcone synthase LF1 OS=Ipomoea batatas GN=CHS-LF... [more]
CHS4_MEDSA5.040e-6472.22Chalcone synthase 4 OS=Medicago sativa GN=CHS4 PE=... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004382_H12 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IVF_H12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936382 ID=CK936382; Name=CK936382; organism=Citrus sinensis; type=EST; length=822bp
GGGGAGTGCACACTCACCAAGCACGAGCCTCAAAACATATTCATTACGGG
TTTAACTTGCAATGGCAACCGTTCAAGAGATCAGAAACGCTCAGCGTGCC
GACGGCCCGGCCATCGTCCTCGCCATCGGTACGGCCACGCCTGCCCACAG
TGTCAACCAGGCTGATTATCCTGACACGTCGGTCGAGCGTCCGTTGTATC
AGCTTGTGTCGACTTCGCAGACGATCCTCCCTGACTCTGACGGTGCAATT
GACGGACACTTGCGCGAAGTCGGTCTCACTTTCCATTTGCTTAAAGACGT
CCCCGGCTTGATCTCAAAGAATATAGAGAAAAGCCTGTCGGAAGCGTTCG
CCCCGGTTGGCATCAGCGACTGGAACTCGATATTCTGGATCGCTCACCCC
GGTGGGCCCGCAATTCTGGACCAAGTGGAGTCTAAACTCGGCCTCAAAGA
GGAGAAGCTGAAGGCCACACGTCAAGTGTTGAGTGAGTACGGTAACATGT
CAAGCGCTTGTGTCCTGTTCATCCTTGACGAGATGAGAAAGAAGTCTGCT
GAGGAAGCGAAAGCCACCACCGGCGAAGGGCTAGATTGGGGTGTGCTGTT
CGGGTTCGGGCCGGGGCTCACCGTCGAGACCGTTGTGCTGCACAGTGTCC
CCATCAAAGCTTGAAGTGAGAACTCCATCAGTATGTTTAGTAGTTCAGTA
ACTTTATGTTGTATGCTTTCACTCTTGAATTATTGGTTGATCGTGTGAAG
GTTTAGTTTTGTCAATTGAATTTAAGGCATCGTACCTTTTCTCCAAAAAA
AAAAAAAAAAAAAAAAAAAAAA
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