CK936382

Overview
NameCK936382
Unique NameCK936382
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length822
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936382 vs. ExPASy Swiss-Prot
Match: THS1_VITVI (Stilbene synthase 1 OS=Vitis vinifera GN=VINST1 PE=1 SV=2)

HSP 1 Score: 244.202 bits (622), Expect = 6.583e-64
Identity = 120/161 (74.53%), Postives = 134/161 (83.23%), Query Frame = 2
Query:  170 PDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVP 652
            PD S+ERPL+QLVS +QT +P+S GAI G+LREVGLTFHL  +VP LIS+NIEK L++AF P+GISDWNS+FWIAHPGGPAILD V            ATR VLSEYGNMSSACVLFILDEMRKKS +  KATTGEGLDWGVLFGFGPGLT+ETVVLHSVP
Sbjct:  228 PDVSIERPLFQLVSAAQTFIPNSAGAIAGNLREVGLTFHLWPNVPTLISENIEKCLTQAFDPLGISDWNSLFWIAHPGGPAILDAVEAKLNLEKKKLEATRHVLSEYGNMSSACVLFILDEMRKKSLKGEKATTGEGLDWGVLFGFGPGLTIETVVLHSVP 388          
BLAST of CK936382 vs. ExPASy Swiss-Prot
Match: CHS3_MEDSA (Chalcone synthase 4-1 OS=Medicago sativa GN=CHS4-1 PE=2 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 6.583e-64
Identity = 118/162 (72.84%), Postives = 135/162 (83.33%), Query Frame = 2
Query:  170 PDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 655
            P   +E+P++++V T+QTI PDS+GAIDGHL E GLTFHLLKDVPG++SKNI+K+L EAF P+ ISD+NSIFWIAHPGGPAILDQV            ATR+VLSEYGNMSSACVLFILDEMRKKSA+    TTGEGLDWGVLFGFGPGLT+ETVVLHSV I
Sbjct:  228 PIPEIEKPIFEMVWTAQTIAPDSEGAIDGHLVEAGLTFHLLKDVPGIVSKNIDKALIEAFQPLNISDYNSIFWIAHPGGPAILDQVEEKLGLKPEKMKATREVLSEYGNMSSACVLFILDEMRKKSAQAGLKTTGEGLDWGVLFGFGPGLTIETVVLHSVAI 389          
BLAST of CK936382 vs. ExPASy Swiss-Prot
Match: CHS2_PEA (Chalcone synthase 2 OS=Pisum sativum GN=CHS2 PE=2 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 6.583e-64
Identity = 117/162 (72.22%), Postives = 136/162 (83.95%), Query Frame = 2
Query:  170 PDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 655
            P   +E+P++++V T+QTI PDS+GAIDGHLRE GLTFHLLKDVPG++SKNI+K+L EAF P+GISD+NSIFWIAHPGGPAILDQV            ATR+VLSEYGNMSSACVLFILDEMRKKS ++   TTGEGL+WGVLFGFGPGLT+ETVVL SV I
Sbjct:  228 PVPEIEKPIFEMVWTAQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNIDKALVEAFKPLGISDYNSIFWIAHPGGPAILDQVEQKLALKPEKMRATREVLSEYGNMSSACVLFILDEMRKKSTQDGLNTTGEGLEWGVLFGFGPGLTIETVVLRSVAI 389          
BLAST of CK936382 vs. ExPASy Swiss-Prot
Match: CHSY_PINSY (Chalcone synthase OS=Pinus sylvestris GN=CHS PE=3 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 8.597e-64
Identity = 123/162 (75.93%), Postives = 133/162 (82.10%), Query Frame = 2
Query:  170 PDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 655
            P   VE+P ++L+ T+QTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSL EAF   GISDWN +FWIAHPGGPAILDQV            ATRQVLS+YGNMSSACV FILDEMRK S E+  +TTGEGLD GVLFGFGPGLTVETVVL SVP+
Sbjct:  233 PVPEVEKPCFELMWTAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFQQFGISDWNQLFWIAHPGGPAILDQVEAKLNLDPKKLSATRQVLSDYGNMSSACVHFILDEMRKSSKEKGCSTTGEGLDVGVLFGFGPGLTVETVVLKSVPL 394          
BLAST of CK936382 vs. ExPASy Swiss-Prot
Match: CHSY_ONOVI (Chalcone synthase OS=Onobrychis viciifolia GN=CHS PE=2 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 8.597e-64
Identity = 117/157 (74.52%), Postives = 134/157 (85.35%), Query Frame = 2
Query:  170 PDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVL 640
            P   +E+PL++L+ T+QTI PDS+GAIDGHLREVGLTFHLLKDVPG++SKNI+K+L EAF P+GISD+NSIFWIAHPGGPAILDQV            ATR+VLSEYGNMSSACVLFILDEMRKKSA+    TTGEGL+WGVLFGFGPGLT+ETVVL
Sbjct:  228 PIPEIEKPLFELIWTAQTIAPDSEGAIDGHLREVGLTFHLLKDVPGIVSKNIDKALVEAFQPLGISDYNSIFWIAHPGGPAILDQVEQKLAFKPEKMRATREVLSEYGNMSSACVLFILDEMRKKSAQNGLKTTGEGLEWGVLFGFGPGLTIETVVL 384          
BLAST of CK936382 vs. ExPASy Swiss-Prot
Match: CHS8_IPOBA (Chalcone synthase DIV OS=Ipomoea batatas GN=CHS-DIV PE=2 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 8.597e-64
Identity = 124/184 (67.39%), Postives = 137/184 (74.46%), Query Frame = 2
Query:  101 DGPAIVLAIGTATPAHSVNQADYPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVP 652
            DG A V+     TPA             E+PL+QLVS +QT+ P+S GAIDGHLREVGLTFHLLKDVP ++S NIEK L EAF P+GISDWNS+FWIAHPGGPAILDQV            ATR VLSEYGNMSSACVLFILDEMRK S+     TTGEGL+WGVLFGFGPGLT+ETVVLHSVP
Sbjct:  217 DGAAAVIVGADPTPA-------------EKPLFQLVSAAQTLAPNSCGAIDGHLREVGLTFHLLKDVPSVVSNNIEKCLFEAFNPLGISDWNSVFWIAHPGGPAILDQVEDKLGLKPEKLRATRHVLSEYGNMSSACVLFILDEMRKASSNAGLGTTGEGLEWGVLFGFGPGLTIETVVLHSVP 387          
BLAST of CK936382 vs. ExPASy Swiss-Prot
Match: CHS1_MEDSA (Chalcone synthase 1 OS=Medicago sativa GN=CHS1 PE=2 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 8.597e-64
Identity = 117/162 (72.22%), Postives = 134/162 (82.72%), Query Frame = 2
Query:  170 PDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 655
            P   +E+P++++V T+ TI PDS+GAIDGHLRE GLTFHLLKDVPG++SKNI+K+L EAF P+ ISD+NSIFWIAHPGGPAILDQV            ATR+VLSEYGNMSSACVLFILDEMRKKS +    TTGEGLDWGVLFGFGPGLT+ETVVLHSV I
Sbjct:  228 PIPEIEKPIFEMVWTAHTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNIDKALIEAFQPLNISDYNSIFWIAHPGGPAILDQVEEKLGLKPEKMKATREVLSEYGNMSSACVLFILDEMRKKSVQAGLKTTGEGLDWGVLFGFGPGLTIETVVLHSVAI 389          
BLAST of CK936382 vs. ExPASy Swiss-Prot
Match: THS3_VITVI (Stilbene synthase 3 (Fragment) OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 1.123e-63
Identity = 118/162 (72.84%), Postives = 135/162 (83.33%), Query Frame = 2
Query:  170 PDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 655
            PD S+ERPL+QLVS +QT +P+S GAI G+LREVGLTFHL  +VP LIS+N+EK L++AF P+GISDWNS+FWIAHPGGPAILD V            ATR VLSEYGNMSSACVLFILDEMRKKS +  KATTGEGLDWGVLFGFGPGLT+ETVVLHS+P+
Sbjct:  225 PDVSIERPLFQLVSAAQTFIPNSAGAIAGNLREVGLTFHLWPNVPTLISENVEKCLTQAFDPLGISDWNSLFWIAHPGGPAILDAVEAKLNLDKKKLEATRHVLSEYGNMSSACVLFILDEMRKKSHKGEKATTGEGLDWGVLFGFGPGLTIETVVLHSIPM 386          
BLAST of CK936382 vs. ExPASy Swiss-Prot
Match: CHS6_IPOBA (Chalcone synthase DII OS=Ipomoea batatas GN=CHS-DII PE=2 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 1.123e-63
Identity = 125/186 (67.20%), Postives = 138/186 (74.19%), Query Frame = 2
Query:  101 DGPAIVLAIGTATPAHSVNQADYPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPIK 658
            DG A V+     TPA             E+PL+QLVS +QT+ P+S GAIDGHLREVGLTFHLLKDVP ++S NIEK L EAF P+GISDWNS+FWIAHPGGPAILDQV            ATR VLSEYGNMSSACVLFILDEMRK S+     TTGEGL+WGVLFGFGPGLT+ETVVLHSV IK
Sbjct:  217 DGAAAVIVGADPTPA-------------EKPLFQLVSAAQTLAPNSCGAIDGHLREVGLTFHLLKDVPSVVSNNIEKCLFEAFNPLGISDWNSVFWIAHPGGPAILDQVEDKLGLKPEKLRATRHVLSEYGNMSSACVLFILDEMRKASSNAGLGTTGEGLEWGVLFGFGPGLTIETVVLHSVLIK 389          
BLAST of CK936382 vs. ExPASy Swiss-Prot
Match: CHSY_PINST (Chalcone synthase OS=Pinus strobus GN=CHS PE=2 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 1.466e-63
Identity = 122/163 (74.85%), Postives = 133/163 (81.60%), Query Frame = 2
Query:  170 PDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPIK 658
            P   VE+P ++++ T+QTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSL EAF   GISDWN +FWIAHPGGPAILDQV            ATRQVLSEYGNMSSACV FILDEMRK S +   +TTGEGLD GVLFGFGPGLTVETVVL SVP++
Sbjct:  233 PVPEVEKPCFEMLWTAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFQQFGISDWNQLFWIAHPGGPAILDQVEAKLNLDPKKLRATRQVLSEYGNMSSACVHFILDEMRKSSQQNGCSTTGEGLDVGVLFGFGPGLTVETVVLKSVPLQ 395          
The following BLAST results are available for this feature:
BLAST of CK936382 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
THS1_VITVI6.583e-6474.53Stilbene synthase 1 OS=Vitis vinifera GN=VINST1 PE... [more]
CHS3_MEDSA6.583e-6472.84Chalcone synthase 4-1 OS=Medicago sativa GN=CHS4-1... [more]
CHS2_PEA6.583e-6472.22Chalcone synthase 2 OS=Pisum sativum GN=CHS2 PE=2 ... [more]
CHSY_PINSY8.597e-6475.93Chalcone synthase OS=Pinus sylvestris GN=CHS PE=3 ... [more]
CHSY_ONOVI8.597e-6474.52Chalcone synthase OS=Onobrychis viciifolia GN=CHS ... [more]
CHS8_IPOBA8.597e-6467.39Chalcone synthase DIV OS=Ipomoea batatas GN=CHS-DI... [more]
CHS1_MEDSA8.597e-6472.22Chalcone synthase 1 OS=Medicago sativa GN=CHS1 PE=... [more]
THS3_VITVI1.123e-6372.84Stilbene synthase 3 (Fragment) OS=Vitis vinifera P... [more]
CHS6_IPOBA1.123e-6367.20Chalcone synthase DII OS=Ipomoea batatas GN=CHS-DI... [more]
CHSY_PINST1.466e-6374.85Chalcone synthase OS=Pinus strobus GN=CHS PE=2 SV=... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004382_H12 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IVF_H12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936382 ID=CK936382; Name=CK936382; organism=Citrus sinensis; type=EST; length=822bp
GGGGAGTGCACACTCACCAAGCACGAGCCTCAAAACATATTCATTACGGG
TTTAACTTGCAATGGCAACCGTTCAAGAGATCAGAAACGCTCAGCGTGCC
GACGGCCCGGCCATCGTCCTCGCCATCGGTACGGCCACGCCTGCCCACAG
TGTCAACCAGGCTGATTATCCTGACACGTCGGTCGAGCGTCCGTTGTATC
AGCTTGTGTCGACTTCGCAGACGATCCTCCCTGACTCTGACGGTGCAATT
GACGGACACTTGCGCGAAGTCGGTCTCACTTTCCATTTGCTTAAAGACGT
CCCCGGCTTGATCTCAAAGAATATAGAGAAAAGCCTGTCGGAAGCGTTCG
CCCCGGTTGGCATCAGCGACTGGAACTCGATATTCTGGATCGCTCACCCC
GGTGGGCCCGCAATTCTGGACCAAGTGGAGTCTAAACTCGGCCTCAAAGA
GGAGAAGCTGAAGGCCACACGTCAAGTGTTGAGTGAGTACGGTAACATGT
CAAGCGCTTGTGTCCTGTTCATCCTTGACGAGATGAGAAAGAAGTCTGCT
GAGGAAGCGAAAGCCACCACCGGCGAAGGGCTAGATTGGGGTGTGCTGTT
CGGGTTCGGGCCGGGGCTCACCGTCGAGACCGTTGTGCTGCACAGTGTCC
CCATCAAAGCTTGAAGTGAGAACTCCATCAGTATGTTTAGTAGTTCAGTA
ACTTTATGTTGTATGCTTTCACTCTTGAATTATTGGTTGATCGTGTGAAG
GTTTAGTTTTGTCAATTGAATTTAAGGCATCGTACCTTTTCTCCAAAAAA
AAAAAAAAAAAAAAAAAAAAAA
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