CK936374
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK936374 vs. ExPASy Swiss-Prot
Match: COX12_SCHPO (Cytochrome c oxidase subunit 6B OS=Schizosaccharomyces pombe GN=cox12 PE=2 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 7.541e-21 Identity = 41/78 (52.56%), Postives = 55/78 (70.51%), Query Frame = 3 Query: 54 AADEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLAAKGEESNECERFAKYYRSLCPGDWIEKWNEQRENGTFPGPL 287 A + T D RFP TNQT+HCF YI++ RC+ AKGE+ C++F Y+SLCP +W+E+W+EQRENGTFP P+ Sbjct: 9 APKQFTFGTVGFDARFPNTNQTKHCFQSYIDYFRCIKAKGEDFVPCKQFWHAYQSLCPMEWVERWDEQRENGTFPAPI 86
BLAST of CK936374 vs. ExPASy Swiss-Prot
Match: CX6B1_PONAB (Cytochrome c oxidase subunit 6B1 OS=Pongo abelii GN=COX6B1 PE=3 SV=3) HSP 1 Score: 90.5077 bits (223), Expect = 5.975e-18 Identity = 38/74 (51.35%), Postives = 51/74 (68.92%), Query Frame = 3 Query: 75 KTAPADFRFPTTNQTRHCFTRYIEFHRC---LAAKGEESNECERFAKYYRSLCPGDWIEKWNEQRENGTFPGPL 287 KTAP D RFP NQTR+C+ Y++FHRC + AKG + + CE + + Y+SLCP W+ W+EQR GTFPG + Sbjct: 13 KTAPFDSRFPNQNQTRNCWQNYLDFHRCQKAMTAKGGDISVCEWYQRVYQSLCPTSWVTDWDEQRAEGTFPGKI 86
BLAST of CK936374 vs. ExPASy Swiss-Prot
Match: CX6B1_HUMAN (Cytochrome c oxidase subunit 6B1 OS=Homo sapiens GN=COX6B1 PE=1 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 5.975e-18 Identity = 38/74 (51.35%), Postives = 51/74 (68.92%), Query Frame = 3 Query: 75 KTAPADFRFPTTNQTRHCFTRYIEFHRC---LAAKGEESNECERFAKYYRSLCPGDWIEKWNEQRENGTFPGPL 287 KTAP D RFP NQTR+C+ Y++FHRC + AKG + + CE + + Y+SLCP W+ W+EQR GTFPG + Sbjct: 13 KTAPFDSRFPNQNQTRNCWQNYLDFHRCQKAMTAKGGDISVCEWYQRVYQSLCPTSWVTDWDEQRAEGTFPGKI 86
BLAST of CK936374 vs. ExPASy Swiss-Prot
Match: CX6B1_MACMU (Cytochrome c oxidase subunit 6B1 OS=Macaca mulatta GN=COX6B1 PE=3 SV=3) HSP 1 Score: 89.7373 bits (221), Expect = 1.019e-17 Identity = 41/87 (47.13%), Postives = 55/87 (63.22%), Query Frame = 3 Query: 51 MAADEIELK-----TAPADFRFPTTNQTRHCFTRYIEFHRC---LAAKGEESNECERFAKYYRSLCPGDWIEKWNEQRENGTFPGPL 287 MA ++IE K TAP D RFP NQTR+C+ Y++FHRC + KG + CE + + Y+SLCP W+ W+EQR GTFPG + Sbjct: 1 MAEEDIETKIKNYKTAPFDSRFPNQNQTRNCWQNYLDFHRCQKAMTTKGGNVSVCEWYQRVYQSLCPTSWVTDWDEQRAEGTFPGKI 87
BLAST of CK936374 vs. ExPASy Swiss-Prot
Match: CX6B1_MACFA (Cytochrome c oxidase subunit 6B1 OS=Macaca fascicularis GN=COX6B1 PE=3 SV=3) HSP 1 Score: 89.7373 bits (221), Expect = 1.019e-17 Identity = 41/87 (47.13%), Postives = 55/87 (63.22%), Query Frame = 3 Query: 51 MAADEIELK-----TAPADFRFPTTNQTRHCFTRYIEFHRC---LAAKGEESNECERFAKYYRSLCPGDWIEKWNEQRENGTFPGPL 287 MA ++IE K TAP D RFP NQTR+C+ Y++FHRC + KG + CE + + Y+SLCP W+ W+EQR GTFPG + Sbjct: 1 MAEEDIETKIKNYKTAPFDSRFPNQNQTRNCWQNYLDFHRCQKAMTTKGGNVSVCEWYQRVYQSLCPTSWVTDWDEQRAEGTFPGKI 87
BLAST of CK936374 vs. ExPASy Swiss-Prot
Match: COX12_YEAST (Cytochrome c oxidase subunit 6B OS=Saccharomyces cerevisiae GN=COX12 PE=1 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 2.965e-17 Identity = 36/72 (50.00%), Postives = 49/72 (68.06%), Query Frame = 3 Query: 72 LKTAPADFRFPTTNQTRHCFTRYIEFHRCLAAKGEESNECERFAKYYRSLCPGDWIEKWNEQRENGTFPGPL 287 L T D RFP NQT+HC+ Y+++H+C+ KGE+ C+ F K Y +LCP DWIEKW++QRE G F G + Sbjct: 9 LHTVGFDARFPQQNQTKHCWQSYVDYHKCVNMKGEDFAPCKVFWKTYNALCPLDWIEKWDDQREKGIFAGDI 80
BLAST of CK936374 vs. ExPASy Swiss-Prot
Match: CX6B1_TARSY (Cytochrome c oxidase subunit 6B1 OS=Tarsius syrichta GN=COX6B1 PE=3 SV=3) HSP 1 Score: 87.8113 bits (216), Expect = 3.873e-17 Identity = 36/74 (48.65%), Postives = 51/74 (68.92%), Query Frame = 3 Query: 75 KTAPADFRFPTTNQTRHCFTRYIEFHRC---LAAKGEESNECERFAKYYRSLCPGDWIEKWNEQRENGTFPGPL 287 KTAP D RFP NQTR+C+ Y++FHRC + AKG + + CE + + Y+SLCP W+ W+++R GTFPG + Sbjct: 13 KTAPFDSRFPNQNQTRNCWQNYLDFHRCEKAMTAKGGDVSVCEWYRRVYKSLCPISWVSTWDDRRAEGTFPGKI 86
BLAST of CK936374 vs. ExPASy Swiss-Prot
Match: CX6B1_BOVIN (Cytochrome c oxidase subunit 6B1 OS=Bos taurus GN=COX6B1 PE=1 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 8.628e-17 Identity = 38/85 (44.71%), Postives = 56/85 (65.88%), Query Frame = 3 Query: 57 ADEIELK-----TAPADFRFPTTNQTRHCFTRYIEFHRC---LAAKGEESNECERFAKYYRSLCPGDWIEKWNEQRENGTFPGPL 287 A++I+ K TAP D RFP NQTR+C+ Y++FHRC + AKG + + CE + + Y+SLCP W+ W+++R GTFPG + Sbjct: 2 AEDIQAKIKNYQTAPFDSRFPNQNQTRNCWQNYLDFHRCEKAMTAKGGDVSVCEWYRRVYKSLCPISWVSTWDDRRAEGTFPGKI 86
BLAST of CK936374 vs. ExPASy Swiss-Prot
Match: CX6B1_MOUSE (Cytochrome c oxidase subunit 6B1 OS=Mus musculus GN=Cox6b1 PE=1 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 5.592e-16 Identity = 34/74 (45.95%), Postives = 50/74 (67.57%), Query Frame = 3 Query: 75 KTAPADFRFPTTNQTRHCFTRYIEFHRC---LAAKGEESNECERFAKYYRSLCPGDWIEKWNEQRENGTFPGPL 287 KTAP D RFP NQT++C+ Y++FHRC + AKG + + CE + + Y+SLCP W+ W+++ GTFPG + Sbjct: 13 KTAPFDSRFPNQNQTKNCWQNYLDFHRCEKAMTAKGGDVSVCEWYRRVYKSLCPVSWVSAWDDRIAEGTFPGKI 86
BLAST of CK936374 vs. ExPASy Swiss-Prot
Match: CX6B2_MOUSE (Cytochrome c oxidase subunit 6B2 OS=Mus musculus GN=Cox6b2 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 3.625e-15 Identity = 31/73 (42.47%), Postives = 49/73 (67.12%), Query Frame = 3 Query: 78 TAPADFRFPTTNQTRHCFTRYIEFHRCLAA---KGEESNECERFAKYYRSLCPGDWIEKWNEQRENGTFPGPL 287 T P D RFP NQTR+C+ ++++HRC+ +G+ + CE + + + SLCP W+++WNEQ + GTFPG + Sbjct: 16 TPPFDPRFPNQNQTRNCYQNFLDYHRCVKTMNRRGKSTQPCEYYFRVFHSLCPISWVQRWNEQIKQGTFPGKI 88 The following BLAST results are available for this feature:
BLAST of CK936374 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >CK936374 ID=CK936374; Name=CK936374; organism=Citrus sinensis; type=EST; length=560bpback to top |