CK936359

Overview
NameCK936359
Unique NameCK936359
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length842
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_SYNPW (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Synechococcus sp. (strain WH7803) GN=fabH PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 3.286e-42
Identity = 88/160 (55.00%), Postives = 110/160 (68.75%), Query Frame = 1
Query:  361 GCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840
            G  L+G GSA     ISND L++ VDT+DEWI  RTGI  RRV +  ++L  LA EA   AL MA  +P+D+DL+L+ TSTP+DLFG A ++   LG   N +A+D+TAACSGFL  LV+AA ++R G  R  LVIG D LSRF DW DR SC+LFGD A
Sbjct:   10 GVGLIGSGSAQAAQVISNDQLSQRVDTNDEWIRTRTGIGRRRVSTADQTLVDLAAEAGRSALTMAGRSPQDLDLILLATSTPDDLFGSAPRVQAELGA-TNAVAFDLTAACSGFLFALVTAAQYLRTGAMRRALVIGADQLSRFVDWDDRRSCVLFGDGA 168          
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_PROMA (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Prochlorococcus marinus GN=fabH PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 5.605e-42
Identity = 86/160 (53.75%), Postives = 109/160 (68.12%), Query Frame = 1
Query:  361 GCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840
            G  LVG GSA P+  +SND LA  VDT+DEW+  RTGIR RR++   ESLT L V AA  A+ MA    E +++VL+ TSTP+DLFG A ++   LG     +A+D+TAACSGFL GLVSAA  ++ G F+  +VIG D LS + DW DR SC+LFGD A
Sbjct:   10 GVSLVGSGSATPSQIVSNDQLALRVDTNDEWVKTRTGIRERRIIGADESLTDLCVAAAKAAVDMAGWGVESIEMVLIATSTPDDLFGMAPKVQSKLGA-TRAVAFDLTAACSGFLFGLVSAAQFLQNGSFKRAVVIGADQLSGWVDWDDRSSCVLFGDGA 168          
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_SYNP6 (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=fabH PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 7.320e-42
Identity = 88/161 (54.66%), Postives = 112/161 (69.57%), Query Frame = 1
Query:  361 GCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGK-ESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840
            G  + G GSAVP+  +SND L+++V+TSDEWI  RTGI  RRV   + ESL+ LA  A   AL+ A +    VDL+L+ TSTP+DLFG A Q+  ALG     +A+D+TAACSGFL  LV+ A  IR G +R VLVIG D LSR+TDW+DR +C+LFGD A
Sbjct:    7 GVAITGSGSAVPSTTLSNDQLSQLVETSDEWIRSRTGIGQRRVAQPQIESLSSLAAAAGQSALEAAGLEATSVDLILLATSTPDDLFGSACQVQAALGA-TQAVAFDLTAACSGFLFALVTGAQFIRSGAYRTVLVIGADVLSRWTDWSDRRTCVLFGDGA 166          
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_SYNE7 (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Synechococcus elongatus (strain PCC 7942) GN=fabH PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 7.320e-42
Identity = 88/161 (54.66%), Postives = 112/161 (69.57%), Query Frame = 1
Query:  361 GCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGK-ESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840
            G  + G GSAVP+  +SND L+++V+TSDEWI  RTGI  RRV   + ESL+ LA  A   AL+ A +    VDL+L+ TSTP+DLFG A Q+  ALG     +A+D+TAACSGFL  LV+ A  IR G +R VLVIG D LSR+TDW+DR +C+LFGD A
Sbjct:    7 GVAITGSGSAVPSTTLSNDQLSQLVETSDEWIRSRTGIGQRRVAQPQIESLSSLAAAAGQSALEAAGLEATSVDLILLATSTPDDLFGSACQVQAALGA-TQAVAFDLTAACSGFLFALVTGAQFIRSGAYRTVLVIGADVLSRWTDWSDRRTCVLFGDGA 166          
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_GLOVI (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Gloeobacter violaceus GN=fabH PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.249e-41
Identity = 83/158 (52.53%), Postives = 115/158 (72.78%), Query Frame = 1
Query:  367 KLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840
            ++ G G AVP   ++N  L+++V TSDEWI+ RTGIR+RR+L+  +SLT LA  AA+ AL  A  +P DVDL+++ TSTP+DLFGGA  +   +G     +A+D+TAACSGF+  L +A+  +R G +R VLV+G DALSR+TDWTDR +C+LFGD A
Sbjct:    5 QMTGVGGAVPAQVLTNYHLSELVTTSDEWIASRTGIRSRRILAPGQSLTQLAARAATDALSQAGRSPLDVDLLILATSTPDDLFGGAAHLQHEIGAV-RAVAFDLTAACSGFVFALATASQFVRTGTYRTVLVVGADALSRYTDWTDRATCVLFGDGA 161          
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_TRIEI (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Trichodesmium erythraeum (strain IMS101) GN=fabH PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.782e-41
Identity = 82/164 (50.00%), Postives = 113/164 (68.90%), Query Frame = 1
Query:  349 LINRGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840
            + N G  ++G GSA+P   + N  L++IV+TSDEWI  RTGI  R+++   ESL  LA +A+  AL  A + P+D+DL+++ TSTP+DLFG A +I   LG +   +A+DIT ACSGFL  LV+ A  IR G ++NVL+IG D LSR+ DW DR +C+LFGD A
Sbjct:    1 MTNIGVSIIGSGSAIPKTSLDNQQLSQIVETSDEWIISRTGINKRQLVDTTESLCSLATQASLAALNQANITPKDIDLIILATSTPDDLFGTACKIQWELGAQ-KAVAFDITVACSGFLFALVTGAQFIRNGVYQNVLLIGADILSRWVDWEDRRTCVLFGDGA 163          
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_SYNR3 (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Synechococcus sp. (strain RCC307) GN=fabH PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.782e-41
Identity = 86/161 (53.42%), Postives = 111/161 (68.94%), Query Frame = 1
Query:  358 RGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840
            +G +L G G+AVP L+ISNDDL+  V+TSDEWI  RTGI  RRV    ESLT LA  A  +AL+ A  +   VDL+L+ TS+P+DLFG A ++   +G   + +A+D+TAACSGFL  LV+AA ++R G     LVIG D LSR+ DW DR SC+LFGD A
Sbjct:    2 KGIRLCGSGAAVPRLRISNDDLSGRVETSDEWIRTRTGIAARRVADESESLTSLAAAAGKQALERAGWDASSVDLILLATSSPDDLFGSAPKVQALIGA-GSAVAFDLTAACSGFLFSLVTAAQYLRTGAMTRALVIGADQLSRWVDWDDRRSCVLFGDGA 161          
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_PORPU (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Porphyra purpurea GN=fabH PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.782e-41
Identity = 79/160 (49.38%), Postives = 110/160 (68.75%), Query Frame = 1
Query:  361 GCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840
            G  ++  GS+VP   + N     I++TSD WIS RTGI+ R +     SLT LA EAA+ AL  A +N ED+DL+++ TSTP+DLFG A+Q+   +G  ++  A+DITAACSGF++ LV+A+  I+ G +  VLV+G D +SR+ DW+DR SCILFGD A
Sbjct:    2 GVHILSTGSSVPNFSVENQQFEDIIETSDHWISTRTGIKKRHLAPSSTSLTKLAAEAANDALSKASINAEDIDLIILATSTPDDLFGSASQLQAEIGATSS-TAFDITAACSGFIIALVTASQFIQAGSYNKVLVVGADTMSRWIDWSDRSSCILFGDGA 160          
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_THEEB (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Thermosynechococcus elongatus (strain BP-1) GN=fabH PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.803e-40
Identity = 84/161 (52.17%), Postives = 112/161 (69.57%), Query Frame = 1
Query:  358 RGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840
            +G K  G G+A P   ++N  L+ +VDTSDEWI  RTGI+ R V +  + L  LA EAA  ALQMA ++P  VDL+++ TSTP+DLFG A  +   +G   N +A+D+TAACSGFL  LV+AA ++R G +R+ LV+GGD LSR+ DW DR +CILFGD A
Sbjct:    4 QGVKFSGVGAATPRQCLTNAHLSALVDTSDEWIQSRTGIQERHVAAPDQRLVDLASEAAGAALQMAGLDPTAVDLIILATSTPDDLFGTACLVQTRIGAV-NAVAFDLTAACSGFLFALVTAAQYLRTGAYRSALVVGGDILSRWVDWGDRRTCILFGDGA 163          
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_GRATL (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Gracilaria tenuistipitata var. liui GN=fabH PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.355e-40
Identity = 78/162 (48.15%), Postives = 119/162 (73.46%), Query Frame = 1
Query:  358 RGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSG-KESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840
            +G +++  GSAVP L I+N ++++IV+TSDEWI  RTGI+ RRVL+G  +S+  LA  AA +AL    ++P ++DL+++ TS+P DLFG A+Q+   +G     +A+D+TAACSGF+L +V+A   I+ G ++N+L+IG D LS++ DW+DR +CILFGD A
Sbjct:    2 QGAQIISIGSAVPDLCINNKEISQIVETSDEWIVTRTGIQERRVLTGTNKSVVDLAYSAAMKALDKIHMDPLEIDLIILATSSPNDLFGSASQVQAKIGAAR-AVAFDLTAACSGFVLAIVTATQFIQNGSYKNILIIGADVLSKWIDWSDRKTCILFGDGA 162          
The following BLAST results are available for this feature:
BLAST of CK936359 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 415
Match NameE-valueIdentityDescription
FABH_SYNPW3.286e-4255.003-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Syn... [more]
FABH_PROMA5.605e-4253.753-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Pro... [more]
FABH_SYNP67.320e-4254.663-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Syn... [more]
FABH_SYNE77.320e-4254.663-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Syn... [more]
FABH_GLOVI1.249e-4152.533-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Glo... [more]
FABH_TRIEI2.782e-4150.003-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Tri... [more]
FABH_SYNR32.782e-4153.423-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Syn... [more]
FABH_PORPU2.782e-4149.383-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Por... [more]
FABH_THEEB1.803e-4052.173-oxoacyl-[acyl-carrier-protein] synthase 3 OS=The... [more]
FABH_GRATL2.355e-4048.153-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Gra... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004383_D04 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0003_IF_D04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936359 ID=CK936359; Name=CK936359; organism=Citrus sinensis; type=EST; length=842bp
GGGGGTTTTTTCTTGTCATGGTTGTATTCACTCTTTTGAATACATTCTTG
TTCTTTCAAATATAAGCTGAAAAAGATCCTTTTTTTTTGTTGCTTCACTC
GTTTTCCTCTAAATATTCCGAACTTTAATTGGTGTATGTGCGAGTTATAT
AGAGAGTGAAAAATGGCAAGTGCATCTGGGCTGTTTACACCTTCAGTTCC
AAGCCTGAGGAGGAGGGTTCAGCCTTCAACATGGAAATATCGATCTGGGT
TTTGCTTCTCTCAGGGAACCTTTAGGAGGGTACTGTGCTCCAGCACCATT
GCTGGTTCTGAGAAGAGTGTGTCTTCTTCCGAATCTAGAGCACCCAGACT
CATCAATAGAGGGTGCAAGTTGGTTGGATGTGGCTCAGCAGTGCCAACTC
TTCAGATTTCCAATGATGATCTCGCAAAAATAGTTGACACTTCTGATGAA
TGGATCTCTGTTCGAACTGGGATTCGAAATCGACGCGTTCTATCAGGCAA
AGAAAGCTTGACTGGTCTAGCTGTAGAGGCAGCAAGTAGAGCTCTTCAGA
TGGCAGAGGTGAACCCTGAAGATGTTGACCTTGTGTTGATGTGCACATCT
ACTCCAGAGGATCTTTTCGGTGGTGCTACTCAGATTCCAAAGGCACTTGG
CTGCAAAAACAATCCTTTAGCTTACGATATTACAGCTGCATGTAGTGGAT
TTCTTTTGGGTCTTGTCTCAGCCGCTTGTCATATTAGGGGAGGCGGGTTT
CGCAATGTTCTAGTGATTGGGGGTGATGCTCTTTCTCGATTTACTGATTG
GACGGATAGAGGATCCTGCATTCTGTTTGGGGATGCTGCGGG
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