CK936359
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_PROMT (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Prochlorococcus marinus (strain NATL2A) GN=fabH PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 3.075e-40 Identity = 82/163 (50.31%), Postives = 111/163 (68.10%), Query Frame = 1 Query: 352 INRGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840 ++ G VG GSA P I ND L + VDT+DEWI RTGI RRV+ ESL LA +AA A++MA+ + + +DL+++ TSTPEDLFG A +I LG +N +A+D+TAACSGFL LV+A+ ++ G + LVIG D LS++ DW DR +C+LFGD A Sbjct: 7 LDLGISFVGSGSATPQKIIKNDQLGQRVDTNDEWIQTRTGIGQRRVIGENESLIDLATDAAVNAVKMADWDVQTIDLIILATSTPEDLFGSAPKIQSNLGA-SNAVAFDLTAACSGFLFALVTASQYLASGSMKRALVIGADQLSKWVDWDDRKTCVLFGDGA 168
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_PORUM (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Porphyra umbilicalis GN=fabH PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 3.400e-39 Identity = 78/160 (48.75%), Postives = 109/160 (68.12%), Query Frame = 1 Query: 361 GCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840 G ++ GS+VP + N I++TSD WIS RTGI+ + SLT LA EAA+ AL A +N ED+DL+++ TSTP+DLFG A+Q+ +G ++ A+DITAACSGF++ LV+A+ I+ G + VLV+G D +SR+ DW+DR SCILFGD A Sbjct: 2 GVHILSTGSSVPNFSVENQQFEDIIETSDHWISTRTGIKKSILPLLLPSLTKLAAEAANDALSKASINAEDIDLIILATSTPDDLFGSASQLQAEIGATSS-TAFDITAACSGFIIALVTASQFIQAGSYNKVLVVGADTMSRWIDWSDRSSCILFGDGA 160
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_PROM5 (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Prochlorococcus marinus (strain MIT 9515) GN=fabH PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 5.429e-37 Identity = 75/160 (46.88%), Postives = 106/160 (66.25%), Query Frame = 1 Query: 361 GCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840 G G GS VP ++N +++K VDTSDEWI RTGI RR+ E+++ + +A A++MA+ + E +DL+++ TSTP DLFG A +I LG NN +A+D+TAACSGFL +++A ++ G +R +VIG D LS + DW DR SCILFGD A Sbjct: 10 GVSFKGSGSYVPHQILTNHEISKKVDTSDEWIKSRTGISQRRISGLSENVSEMGYKAGLAAIEMAKWDIETIDLIILATSTPHDLFGSAPEIQSKLGA-NNAVAFDLTAACSGFLFAVITATQFLKAGSYRRAIVIGSDQLSSYVDWNDRRSCILFGDGA 168
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_PROM9 (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Prochlorococcus marinus (strain MIT 9312) GN=fabH PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 7.090e-37 Identity = 76/160 (47.50%), Postives = 106/160 (66.25%), Query Frame = 1 Query: 361 GCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840 G G GS VP ++N+ +++ VDTSDEWI RTGI RR+ +++ +A EAA A++M + + +DL+++ TSTP DLFG A I LG +N +A+D+TAACSGFL L++A+ ++GG F+ +VIG D LS F DW DR SCILFGD A Sbjct: 10 GVSFKGSGSYVPDQILTNETISQKVDTSDEWIKSRTGISERRISGLGDNVNDMAYEAALSAIEMTNWDIKTIDLIVLATSTPHDLFGSAPSIQAKLGA-HNAVAFDLTAACSGFLFALITASQFLKGGSFKRAIVIGADQLSSFVDWNDRRSCILFGDGA 168
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_PROM2 (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Prochlorococcus marinus (strain MIT 9215) GN=fabH PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 3.519e-36 Identity = 73/160 (45.62%), Postives = 106/160 (66.25%), Query Frame = 1 Query: 361 GCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840 G G GS VP ++N+++++ VDTSDEWI RTGI RR+ ++++ + +AA A++MA + + +DL+++ TSTP DLFG A I LG +N +A+D+TAACSGFL L++ + ++ G F+ LV+G D LS F DW DR SCILFGD A Sbjct: 10 GVSFKGSGSYVPDQILTNEEISQKVDTSDEWIKSRTGISERRISRVEDNVADMGYKAALTAIEMANWDIKTIDLIVLATSTPHDLFGSAPSIQSKLGA-SNAVAFDLTAACSGFLFALITTSQFLKAGNFKRALVVGADQLSSFVDWNDRRSCILFGDGA 168
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_PROMP (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=fabH PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 2.281e-35 Identity = 73/160 (45.62%), Postives = 104/160 (65.00%), Query Frame = 1 Query: 361 GCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840 G G GS VP ++N +++K V+TSDEWI RTGI RR+ E+++ + +AA A++MA + E +DL+++ TSTP DLFG A +I LG N +A+D+TAACSGFL ++A ++ G ++ +VIG D LS + DW DR SCILFGD A Sbjct: 10 GVSFKGSGSYVPNQILTNQEISKKVETSDEWIKSRTGISQRRISGLSENVSEMGYKAALGAIEMARWDIETIDLIILATSTPNDLFGSAPEIQSKLGA-INAVAFDLTAACSGFLFAAITATQFLKAGSYKRAVVIGSDQLSSYVDWNDRRSCILFGDGA 168
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_PROM0 (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Prochlorococcus marinus (strain MIT 9301) GN=fabH PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 2.281e-35 Identity = 75/160 (46.88%), Postives = 104/160 (65.00%), Query Frame = 1 Query: 361 GCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840 G G GS VP ++N +++ VDTS+EWI RTGI RR+ S +++ + +AA A++MA + + VDL+++ TSTP DLFG A I LG N +A+D+TAACSGFL L++ + ++GG F+ +VIG D LS F DW DR SCILFGD A Sbjct: 10 GVSFKGSGSYVPDQILTNQKISQKVDTSNEWIKSRTGISERRISSLGDNVNEMGYKAALTAIEMANWDIKTVDLIVLATSTPHDLFGSAPSIQAKLGAA-NAVAFDLTAACSGFLFALITTSQFLKGGSFKRAIVIGADQLSSFVDWNDRRSCILFGDGA 168
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_NEIG2 (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Neisseria gonorrhoeae (strain NCCP11945) GN=fabH PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 2.281e-35 Identity = 74/159 (46.54%), Postives = 105/159 (66.04%), Query Frame = 1 Query: 367 KLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840 K+ G GS +P ++SNDDLA+ VDTSDEWI+ RTGI+ R + + E + LA EAA RAL A++N D+DL+++ T+TP+ F AT + + LG N A+D+ A C+GF+ L +A +I+ G +N LVIG + SR DW DR +C+LFGD A Sbjct: 5 KISGTGSYLPANRVSNDDLAQKVDTSDEWITARTGIKFRHIAAENEKTSDLAAEAARRALADAKLNINDIDLIIVATATPDMQFPSTATIVQQKLGITNGCPAFDVQAVCAGFMYALTTANAYIKSGMAKNALVIGAETFSRIVDWNDRTTCVLFGDGA 163
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_NEIG1 (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=fabH PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 2.281e-35 Identity = 74/159 (46.54%), Postives = 105/159 (66.04%), Query Frame = 1 Query: 367 KLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840 K+ G GS +P ++SNDDLA+ VDTSDEWI+ RTGI+ R + + E + LA EAA RAL A++N D+DL+++ T+TP+ F AT + + LG N A+D+ A C+GF+ L +A +I+ G +N LVIG + SR DW DR +C+LFGD A Sbjct: 5 KISGTGSYLPANRVSNDDLAQKVDTSDEWITARTGIKFRHIAAENEKTSDLAAEAARRALADAKLNINDIDLIIVATATPDMQFPSTATIVQQKLGITNGCPAFDVQAVCAGFMYALTTANAYIKSGMAKNALVIGAETFSRIVDWNDRTTCVLFGDGA 163
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_CALS8 (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=fabH PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 2.281e-35 Identity = 78/159 (49.06%), Postives = 105/159 (66.04%), Query Frame = 1 Query: 367 KLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840 K++ G VP ++N DL K+VDTSDEWI+ RTGI+ RR++ G S T LAV AA A+ A + P+D+DLV++ T TPE F A + K L K N A+DI+AACSGF+ + A I+ G +N LVIG +ALSR T+W+DR +C+LFGD A Sbjct: 6 KILSTGRYVPDRVLTNYDLEKMVDTSDEWITQRTGIKERRIVDGTTSTTDLAVRAAKNAMDKAGILPDDIDLVIVATVTPEMFFPSTACLVQKELKLK-NAFAFDISAACSGFIYAMAIATHFIQNGFCKNALVIGAEALSRITNWSDRSTCVLFGDGA 163 The following BLAST results are available for this feature:
BLAST of CK936359 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 415
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Sequences
The
following sequences are available for this feature:
EST sequence >CK936359 ID=CK936359; Name=CK936359; organism=Citrus sinensis; type=EST; length=842bpback to top |