CK936359

Overview
NameCK936359
Unique NameCK936359
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length842
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_PROMT (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Prochlorococcus marinus (strain NATL2A) GN=fabH PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.075e-40
Identity = 82/163 (50.31%), Postives = 111/163 (68.10%), Query Frame = 1
Query:  352 INRGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840
            ++ G   VG GSA P   I ND L + VDT+DEWI  RTGI  RRV+   ESL  LA +AA  A++MA+ + + +DL+++ TSTPEDLFG A +I   LG  +N +A+D+TAACSGFL  LV+A+ ++  G  +  LVIG D LS++ DW DR +C+LFGD A
Sbjct:    7 LDLGISFVGSGSATPQKIIKNDQLGQRVDTNDEWIQTRTGIGQRRVIGENESLIDLATDAAVNAVKMADWDVQTIDLIILATSTPEDLFGSAPKIQSNLGA-SNAVAFDLTAACSGFLFALVTASQYLASGSMKRALVIGADQLSKWVDWDDRKTCVLFGDGA 168          
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_PORUM (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Porphyra umbilicalis GN=fabH PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 3.400e-39
Identity = 78/160 (48.75%), Postives = 109/160 (68.12%), Query Frame = 1
Query:  361 GCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840
            G  ++  GS+VP   + N     I++TSD WIS RTGI+   +     SLT LA EAA+ AL  A +N ED+DL+++ TSTP+DLFG A+Q+   +G  ++  A+DITAACSGF++ LV+A+  I+ G +  VLV+G D +SR+ DW+DR SCILFGD A
Sbjct:    2 GVHILSTGSSVPNFSVENQQFEDIIETSDHWISTRTGIKKSILPLLLPSLTKLAAEAANDALSKASINAEDIDLIILATSTPDDLFGSASQLQAEIGATSS-TAFDITAACSGFIIALVTASQFIQAGSYNKVLVVGADTMSRWIDWSDRSSCILFGDGA 160          
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_PROM5 (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Prochlorococcus marinus (strain MIT 9515) GN=fabH PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 5.429e-37
Identity = 75/160 (46.88%), Postives = 106/160 (66.25%), Query Frame = 1
Query:  361 GCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840
            G    G GS VP   ++N +++K VDTSDEWI  RTGI  RR+    E+++ +  +A   A++MA+ + E +DL+++ TSTP DLFG A +I   LG  NN +A+D+TAACSGFL  +++A   ++ G +R  +VIG D LS + DW DR SCILFGD A
Sbjct:   10 GVSFKGSGSYVPHQILTNHEISKKVDTSDEWIKSRTGISQRRISGLSENVSEMGYKAGLAAIEMAKWDIETIDLIILATSTPHDLFGSAPEIQSKLGA-NNAVAFDLTAACSGFLFAVITATQFLKAGSYRRAIVIGSDQLSSYVDWNDRRSCILFGDGA 168          
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_PROM9 (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Prochlorococcus marinus (strain MIT 9312) GN=fabH PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 7.090e-37
Identity = 76/160 (47.50%), Postives = 106/160 (66.25%), Query Frame = 1
Query:  361 GCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840
            G    G GS VP   ++N+ +++ VDTSDEWI  RTGI  RR+    +++  +A EAA  A++M   + + +DL+++ TSTP DLFG A  I   LG  +N +A+D+TAACSGFL  L++A+  ++GG F+  +VIG D LS F DW DR SCILFGD A
Sbjct:   10 GVSFKGSGSYVPDQILTNETISQKVDTSDEWIKSRTGISERRISGLGDNVNDMAYEAALSAIEMTNWDIKTIDLIVLATSTPHDLFGSAPSIQAKLGA-HNAVAFDLTAACSGFLFALITASQFLKGGSFKRAIVIGADQLSSFVDWNDRRSCILFGDGA 168          
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_PROM2 (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Prochlorococcus marinus (strain MIT 9215) GN=fabH PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.519e-36
Identity = 73/160 (45.62%), Postives = 106/160 (66.25%), Query Frame = 1
Query:  361 GCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840
            G    G GS VP   ++N+++++ VDTSDEWI  RTGI  RR+   ++++  +  +AA  A++MA  + + +DL+++ TSTP DLFG A  I   LG  +N +A+D+TAACSGFL  L++ +  ++ G F+  LV+G D LS F DW DR SCILFGD A
Sbjct:   10 GVSFKGSGSYVPDQILTNEEISQKVDTSDEWIKSRTGISERRISRVEDNVADMGYKAALTAIEMANWDIKTIDLIVLATSTPHDLFGSAPSIQSKLGA-SNAVAFDLTAACSGFLFALITTSQFLKAGNFKRALVVGADQLSSFVDWNDRRSCILFGDGA 168          
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_PROMP (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=fabH PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 2.281e-35
Identity = 73/160 (45.62%), Postives = 104/160 (65.00%), Query Frame = 1
Query:  361 GCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840
            G    G GS VP   ++N +++K V+TSDEWI  RTGI  RR+    E+++ +  +AA  A++MA  + E +DL+++ TSTP DLFG A +I   LG   N +A+D+TAACSGFL   ++A   ++ G ++  +VIG D LS + DW DR SCILFGD A
Sbjct:   10 GVSFKGSGSYVPNQILTNQEISKKVETSDEWIKSRTGISQRRISGLSENVSEMGYKAALGAIEMARWDIETIDLIILATSTPNDLFGSAPEIQSKLGA-INAVAFDLTAACSGFLFAAITATQFLKAGSYKRAVVIGSDQLSSYVDWNDRRSCILFGDGA 168          
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_PROM0 (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Prochlorococcus marinus (strain MIT 9301) GN=fabH PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 2.281e-35
Identity = 75/160 (46.88%), Postives = 104/160 (65.00%), Query Frame = 1
Query:  361 GCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840
            G    G GS VP   ++N  +++ VDTS+EWI  RTGI  RR+ S  +++  +  +AA  A++MA  + + VDL+++ TSTP DLFG A  I   LG   N +A+D+TAACSGFL  L++ +  ++GG F+  +VIG D LS F DW DR SCILFGD A
Sbjct:   10 GVSFKGSGSYVPDQILTNQKISQKVDTSNEWIKSRTGISERRISSLGDNVNEMGYKAALTAIEMANWDIKTVDLIVLATSTPHDLFGSAPSIQAKLGAA-NAVAFDLTAACSGFLFALITTSQFLKGGSFKRAIVIGADQLSSFVDWNDRRSCILFGDGA 168          
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_NEIG2 (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Neisseria gonorrhoeae (strain NCCP11945) GN=fabH PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 2.281e-35
Identity = 74/159 (46.54%), Postives = 105/159 (66.04%), Query Frame = 1
Query:  367 KLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840
            K+ G GS +P  ++SNDDLA+ VDTSDEWI+ RTGI+ R + +  E  + LA EAA RAL  A++N  D+DL+++ T+TP+  F   AT + + LG  N   A+D+ A C+GF+  L +A  +I+ G  +N LVIG +  SR  DW DR +C+LFGD A
Sbjct:    5 KISGTGSYLPANRVSNDDLAQKVDTSDEWITARTGIKFRHIAAENEKTSDLAAEAARRALADAKLNINDIDLIIVATATPDMQFPSTATIVQQKLGITNGCPAFDVQAVCAGFMYALTTANAYIKSGMAKNALVIGAETFSRIVDWNDRTTCVLFGDGA 163          
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_NEIG1 (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=fabH PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 2.281e-35
Identity = 74/159 (46.54%), Postives = 105/159 (66.04%), Query Frame = 1
Query:  367 KLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840
            K+ G GS +P  ++SNDDLA+ VDTSDEWI+ RTGI+ R + +  E  + LA EAA RAL  A++N  D+DL+++ T+TP+  F   AT + + LG  N   A+D+ A C+GF+  L +A  +I+ G  +N LVIG +  SR  DW DR +C+LFGD A
Sbjct:    5 KISGTGSYLPANRVSNDDLAQKVDTSDEWITARTGIKFRHIAAENEKTSDLAAEAARRALADAKLNINDIDLIIVATATPDMQFPSTATIVQQKLGITNGCPAFDVQAVCAGFMYALTTANAYIKSGMAKNALVIGAETFSRIVDWNDRTTCVLFGDGA 163          
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_CALS8 (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=fabH PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 2.281e-35
Identity = 78/159 (49.06%), Postives = 105/159 (66.04%), Query Frame = 1
Query:  367 KLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840
            K++  G  VP   ++N DL K+VDTSDEWI+ RTGI+ RR++ G  S T LAV AA  A+  A + P+D+DLV++ T TPE  F   A  + K L  K N  A+DI+AACSGF+  +  A   I+ G  +N LVIG +ALSR T+W+DR +C+LFGD A
Sbjct:    6 KILSTGRYVPDRVLTNYDLEKMVDTSDEWITQRTGIKERRIVDGTTSTTDLAVRAAKNAMDKAGILPDDIDLVIVATVTPEMFFPSTACLVQKELKLK-NAFAFDISAACSGFIYAMAIATHFIQNGFCKNALVIGAEALSRITNWSDRSTCVLFGDGA 163          
The following BLAST results are available for this feature:
BLAST of CK936359 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 415
Match NameE-valueIdentityDescription
FABH_PROMT3.075e-4050.313-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Pro... [more]
FABH_PORUM3.400e-3948.753-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Por... [more]
FABH_PROM55.429e-3746.883-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Pro... [more]
FABH_PROM97.090e-3747.503-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Pro... [more]
FABH_PROM23.519e-3645.633-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Pro... [more]
FABH_PROMP2.281e-3545.633-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Pro... [more]
FABH_PROM02.281e-3546.883-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Pro... [more]
FABH_NEIG22.281e-3546.543-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Nei... [more]
FABH_NEIG12.281e-3546.543-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Nei... [more]
FABH_CALS82.281e-3549.063-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Cal... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004383_D04 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0003_IF_D04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936359 ID=CK936359; Name=CK936359; organism=Citrus sinensis; type=EST; length=842bp
GGGGGTTTTTTCTTGTCATGGTTGTATTCACTCTTTTGAATACATTCTTG
TTCTTTCAAATATAAGCTGAAAAAGATCCTTTTTTTTTGTTGCTTCACTC
GTTTTCCTCTAAATATTCCGAACTTTAATTGGTGTATGTGCGAGTTATAT
AGAGAGTGAAAAATGGCAAGTGCATCTGGGCTGTTTACACCTTCAGTTCC
AAGCCTGAGGAGGAGGGTTCAGCCTTCAACATGGAAATATCGATCTGGGT
TTTGCTTCTCTCAGGGAACCTTTAGGAGGGTACTGTGCTCCAGCACCATT
GCTGGTTCTGAGAAGAGTGTGTCTTCTTCCGAATCTAGAGCACCCAGACT
CATCAATAGAGGGTGCAAGTTGGTTGGATGTGGCTCAGCAGTGCCAACTC
TTCAGATTTCCAATGATGATCTCGCAAAAATAGTTGACACTTCTGATGAA
TGGATCTCTGTTCGAACTGGGATTCGAAATCGACGCGTTCTATCAGGCAA
AGAAAGCTTGACTGGTCTAGCTGTAGAGGCAGCAAGTAGAGCTCTTCAGA
TGGCAGAGGTGAACCCTGAAGATGTTGACCTTGTGTTGATGTGCACATCT
ACTCCAGAGGATCTTTTCGGTGGTGCTACTCAGATTCCAAAGGCACTTGG
CTGCAAAAACAATCCTTTAGCTTACGATATTACAGCTGCATGTAGTGGAT
TTCTTTTGGGTCTTGTCTCAGCCGCTTGTCATATTAGGGGAGGCGGGTTT
CGCAATGTTCTAGTGATTGGGGGTGATGCTCTTTCTCGATTTACTGATTG
GACGGATAGAGGATCCTGCATTCTGTTTGGGGATGCTGCGGG
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