CK936359

Overview
NameCK936359
Unique NameCK936359
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length842
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_CLOAB (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Clostridium acetobutylicum GN=fabH PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.360e-32
Identity = 67/159 (42.14%), Postives = 109/159 (68.55%), Query Frame = 1
Query:  367 KLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGG-ATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840
            +++G GS VP   ++N+D++KIVDTSDEWIS RTGI+ RR+ S  E+ + L  +AA RA++ + + PE++DL+++ T++P+      A  + + +G KN    +D+ AAC+GF+  L +A+  I+ G ++  LV+G + LS+  DW DRG+C+LFGD A
Sbjct:    5 EIIGTGSYVPEKIVTNEDMSKIVDTSDEWISSRTGIKERRI-SINENTSDLGAKAALRAIEDSNIKPEEIDLIIVATTSPDSYTPSVACIVQEKIGAKN-AACFDLNAACTGFIFALNTASQFIKTGEYKTALVVGTEVLSKILDWQDRGTCVLFGDGA 161          
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_BRUSI (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=fabH PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.360e-32
Identity = 73/156 (46.79%), Postives = 94/156 (60.26%), Query Frame = 1
Query:  376 GCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840
            G GSA+P   + N D   IV+TSDEWI  RTGIR R +    E+   L   AA  A++ A + P D+DLVL+ TSTP + F   A  I + LG      A+D+ A CSGF+  + +A  +IRGG  R VLVIG +  SR  DWTDR +C+LFGD A
Sbjct:    8 GIGSALPKRVMKNTDFEGIVETSDEWIVQRTGIRERHIAGEGETTVSLGAAAARAAIENAGLQPSDIDLVLLATSTPNNTFPASAVAIQRELGITRG-FAFDLQAVCSGFIYAITTADLYIRGGMARRVLVIGAETFSRILDWTDRTTCVLFGDGA 162          
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_BRUO2 (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=fabH PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.360e-32
Identity = 73/156 (46.79%), Postives = 94/156 (60.26%), Query Frame = 1
Query:  376 GCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840
            G GSA+P   + N D   IV+TSDEWI  RTGIR R +    E+   L   AA  A++ A + P D+DLVL+ TSTP + F   A  I + LG      A+D+ A CSGF+  + +A  +IRGG  R VLVIG +  SR  DWTDR +C+LFGD A
Sbjct:    8 GIGSALPKRVMKNTDFEGIVETSDEWIVQRTGIRERHIAGKGETTVSLGAAAARAAIENAGLQPSDIDLVLLATSTPNNTFPASAVAIQRELGITRG-FAFDLQAVCSGFIYAITTADLYIRGGMARRVLVIGAETFSRILDWTDRTTCVLFGDGA 162          
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_BRUME (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Brucella melitensis GN=fabH PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.360e-32
Identity = 73/156 (46.79%), Postives = 94/156 (60.26%), Query Frame = 1
Query:  376 GCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840
            G GSA+P   + N D   IV+TSDEWI  RTGIR R +    E+   L   AA  A++ A + P D+DLVL+ TSTP + F   A  I + LG      A+D+ A CSGF+  + +A  +IRGG  R VLVIG +  SR  DWTDR +C+LFGD A
Sbjct:    8 GIGSALPKRVMKNTDFEGIVETSDEWIVQRTGIRERHIAGEGETTVSLGAAAARAAIENAGLQPSDIDLVLLATSTPNNTFPASAVAIQRELGITRG-FAFDLQAVCSGFIYAITTADLYIRGGMARRVLVIGAETFSRILDWTDRTTCVLFGDGA 162          
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_BRUAB (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Brucella abortus GN=fabH PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.360e-32
Identity = 73/156 (46.79%), Postives = 94/156 (60.26%), Query Frame = 1
Query:  376 GCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840
            G GSA+P   + N D   IV+TSDEWI  RTGIR R +    E+   L   AA  A++ A + P D+DLVL+ TSTP + F   A  I + LG      A+D+ A CSGF+  + +A  +IRGG  R VLVIG +  SR  DWTDR +C+LFGD A
Sbjct:    8 GIGSALPKRVMKNTDFEGIVETSDEWIVQRTGIRERHIAGEGETTVSLGAAAARAAIENAGLQPSDIDLVLLATSTPNNTFPASAVAIQRELGITRG-FAFDLQAVCSGFIYAITTADLYIRGGMARRVLVIGAETFSRILDWTDRTTCVLFGDGA 162          
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_BRUA2 (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Brucella abortus (strain 2308) GN=fabH PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.360e-32
Identity = 73/156 (46.79%), Postives = 94/156 (60.26%), Query Frame = 1
Query:  376 GCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840
            G GSA+P   + N D   IV+TSDEWI  RTGIR R +    E+   L   AA  A++ A + P D+DLVL+ TSTP + F   A  I + LG      A+D+ A CSGF+  + +A  +IRGG  R VLVIG +  SR  DWTDR +C+LFGD A
Sbjct:    8 GIGSALPKRVMKNTDFEGIVETSDEWIVQRTGIRERHIAGEGETTVSLGAAAARAAIENAGLQPSDIDLVLLATSTPNNTFPASAVAIQRELGITRG-FAFDLQAVCSGFIYAITTADLYIRGGMARRVLVIGAETFSRILDWTDRTTCVLFGDGA 162          
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_BRUA1 (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Brucella abortus (strain S19) GN=fabH PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.360e-32
Identity = 73/156 (46.79%), Postives = 94/156 (60.26%), Query Frame = 1
Query:  376 GCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840
            G GSA+P   + N D   IV+TSDEWI  RTGIR R +    E+   L   AA  A++ A + P D+DLVL+ TSTP + F   A  I + LG      A+D+ A CSGF+  + +A  +IRGG  R VLVIG +  SR  DWTDR +C+LFGD A
Sbjct:    8 GIGSALPKRVMKNTDFEGIVETSDEWIVQRTGIRERHIAGEGETTVSLGAAAARAAIENAGLQPSDIDLVLLATSTPNNTFPASAVAIQRELGITRG-FAFDLQAVCSGFIYAITTADLYIRGGMARRVLVIGAETFSRILDWTDRTTCVLFGDGA 162          
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH1_BACCR (3-oxoacyl-[acyl-carrier-protein] synthase 3 protein 1 OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=fabH1 PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.360e-32
Identity = 70/158 (44.30%), Postives = 105/158 (66.46%), Query Frame = 1
Query:  370 LVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGG-ATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840
            ++G G  VP   ++N DL KI++TSDEWI  RTGI  RR+       + +AVEA+ +AL+ A ++ ED+DL+L+ T TP+  F   A  I +A+G K +  A D++AAC+GF+ G+++A   I+ G ++NVLV+G D LS+  DW DR + +LFGD A
Sbjct:    5 ILGIGRYVPEKVVTNHDLEKIMETSDEWIRTRTGIAERRIADDTIDTSYMAVEASKKALEDAGISGEDIDLILVATVTPDRAFPAVACVIQEAIGAK-HAAAMDLSAACAGFMYGMITAQQFIQTGTYKNVLVVGSDKLSKIVDWNDRNTAVLFGDGA 161          
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_RICAH (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Rickettsia akari (strain Hartford) GN=fabH PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 3.083e-32
Identity = 66/160 (41.25%), Postives = 104/160 (65.00%), Query Frame = 1
Query:  364 CKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGG-ATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840
            CK++GCG  +P+  +SND+LAK V+T+DEWI  R+GI  R +    E  + LA+++A +A+  A V+  DVDL++ CT+T ++ F   AT++   LG  N P ++D+ A C+GF+ GL  A   I  G ++ +L+IG + ++   DW DR +C+LFGD A
Sbjct:    3 CKIIGCGGYLPSKIVSNDELAKFVETNDEWIRTRSGISQRHIADDNEYTSHLALKSAEQAIADARVSANDVDLIITCTTTSDNSFPSVATKLHGYLGLTNIP-SFDLQAVCAGFVYGLQVADSLIASGKYKTILLIGAEKMTSLLDWNDRSTCVLFGDGA 161          
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_GEOKA (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Geobacillus kaustophilus GN=fabH PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 3.083e-32
Identity = 73/161 (45.34%), Postives = 103/161 (63.98%), Query Frame = 1
Query:  361 GCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGG-ATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840
            G  ++G G  VP   ++N DL K++DTSDEWI  RTGI  RR+ +     + +A  AA RALQ A +  +D+DL+L+ T TP+  F   A  + + LG   N  A DI+AAC+GF+ G+V+AA  I  G ++ +LV+G D LS+ TDWTDR + +LFGD A
Sbjct:    2 GAGIIGVGRYVPEKVLTNFDLEKMMDTSDEWIRTRTGIEERRIAADDIDTSDMAYFAAKRALQDAGMEAKDIDLILVATVTPDRPFPSVACMLQERLGAV-NAAALDISAACAGFMYGMVTAAQFIDTGAYKYILVVGADKLSKITDWTDRNTAVLFGDGA 161          
The following BLAST results are available for this feature:
BLAST of CK936359 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 415
Match NameE-valueIdentityDescription
FABH_CLOAB2.360e-3242.143-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Clo... [more]
FABH_BRUSI2.360e-3246.793-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Bru... [more]
FABH_BRUO22.360e-3246.793-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Bru... [more]
FABH_BRUME2.360e-3246.793-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Bru... [more]
FABH_BRUAB2.360e-3246.793-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Bru... [more]
FABH_BRUA22.360e-3246.793-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Bru... [more]
FABH_BRUA12.360e-3246.793-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Bru... [more]
FABH1_BACCR2.360e-3244.303-oxoacyl-[acyl-carrier-protein] synthase 3 protei... [more]
FABH_RICAH3.083e-3241.253-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Ric... [more]
FABH_GEOKA3.083e-3245.343-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Geo... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004383_D04 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0003_IF_D04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936359 ID=CK936359; Name=CK936359; organism=Citrus sinensis; type=EST; length=842bp
GGGGGTTTTTTCTTGTCATGGTTGTATTCACTCTTTTGAATACATTCTTG
TTCTTTCAAATATAAGCTGAAAAAGATCCTTTTTTTTTGTTGCTTCACTC
GTTTTCCTCTAAATATTCCGAACTTTAATTGGTGTATGTGCGAGTTATAT
AGAGAGTGAAAAATGGCAAGTGCATCTGGGCTGTTTACACCTTCAGTTCC
AAGCCTGAGGAGGAGGGTTCAGCCTTCAACATGGAAATATCGATCTGGGT
TTTGCTTCTCTCAGGGAACCTTTAGGAGGGTACTGTGCTCCAGCACCATT
GCTGGTTCTGAGAAGAGTGTGTCTTCTTCCGAATCTAGAGCACCCAGACT
CATCAATAGAGGGTGCAAGTTGGTTGGATGTGGCTCAGCAGTGCCAACTC
TTCAGATTTCCAATGATGATCTCGCAAAAATAGTTGACACTTCTGATGAA
TGGATCTCTGTTCGAACTGGGATTCGAAATCGACGCGTTCTATCAGGCAA
AGAAAGCTTGACTGGTCTAGCTGTAGAGGCAGCAAGTAGAGCTCTTCAGA
TGGCAGAGGTGAACCCTGAAGATGTTGACCTTGTGTTGATGTGCACATCT
ACTCCAGAGGATCTTTTCGGTGGTGCTACTCAGATTCCAAAGGCACTTGG
CTGCAAAAACAATCCTTTAGCTTACGATATTACAGCTGCATGTAGTGGAT
TTCTTTTGGGTCTTGTCTCAGCCGCTTGTCATATTAGGGGAGGCGGGTTT
CGCAATGTTCTAGTGATTGGGGGTGATGCTCTTTCTCGATTTACTGATTG
GACGGATAGAGGATCCTGCATTCTGTTTGGGGATGCTGCGGG
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