CK936359
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_CLOAB (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Clostridium acetobutylicum GN=fabH PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.360e-32 Identity = 67/159 (42.14%), Postives = 109/159 (68.55%), Query Frame = 1 Query: 367 KLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGG-ATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840 +++G GS VP ++N+D++KIVDTSDEWIS RTGI+ RR+ S E+ + L +AA RA++ + + PE++DL+++ T++P+ A + + +G KN +D+ AAC+GF+ L +A+ I+ G ++ LV+G + LS+ DW DRG+C+LFGD A Sbjct: 5 EIIGTGSYVPEKIVTNEDMSKIVDTSDEWISSRTGIKERRI-SINENTSDLGAKAALRAIEDSNIKPEEIDLIIVATTSPDSYTPSVACIVQEKIGAKN-AACFDLNAACTGFIFALNTASQFIKTGEYKTALVVGTEVLSKILDWQDRGTCVLFGDGA 161
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_BRUSI (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=fabH PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.360e-32 Identity = 73/156 (46.79%), Postives = 94/156 (60.26%), Query Frame = 1 Query: 376 GCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840 G GSA+P + N D IV+TSDEWI RTGIR R + E+ L AA A++ A + P D+DLVL+ TSTP + F A I + LG A+D+ A CSGF+ + +A +IRGG R VLVIG + SR DWTDR +C+LFGD A Sbjct: 8 GIGSALPKRVMKNTDFEGIVETSDEWIVQRTGIRERHIAGEGETTVSLGAAAARAAIENAGLQPSDIDLVLLATSTPNNTFPASAVAIQRELGITRG-FAFDLQAVCSGFIYAITTADLYIRGGMARRVLVIGAETFSRILDWTDRTTCVLFGDGA 162
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_BRUO2 (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=fabH PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.360e-32 Identity = 73/156 (46.79%), Postives = 94/156 (60.26%), Query Frame = 1 Query: 376 GCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840 G GSA+P + N D IV+TSDEWI RTGIR R + E+ L AA A++ A + P D+DLVL+ TSTP + F A I + LG A+D+ A CSGF+ + +A +IRGG R VLVIG + SR DWTDR +C+LFGD A Sbjct: 8 GIGSALPKRVMKNTDFEGIVETSDEWIVQRTGIRERHIAGKGETTVSLGAAAARAAIENAGLQPSDIDLVLLATSTPNNTFPASAVAIQRELGITRG-FAFDLQAVCSGFIYAITTADLYIRGGMARRVLVIGAETFSRILDWTDRTTCVLFGDGA 162
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_BRUME (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Brucella melitensis GN=fabH PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.360e-32 Identity = 73/156 (46.79%), Postives = 94/156 (60.26%), Query Frame = 1 Query: 376 GCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840 G GSA+P + N D IV+TSDEWI RTGIR R + E+ L AA A++ A + P D+DLVL+ TSTP + F A I + LG A+D+ A CSGF+ + +A +IRGG R VLVIG + SR DWTDR +C+LFGD A Sbjct: 8 GIGSALPKRVMKNTDFEGIVETSDEWIVQRTGIRERHIAGEGETTVSLGAAAARAAIENAGLQPSDIDLVLLATSTPNNTFPASAVAIQRELGITRG-FAFDLQAVCSGFIYAITTADLYIRGGMARRVLVIGAETFSRILDWTDRTTCVLFGDGA 162
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_BRUAB (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Brucella abortus GN=fabH PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.360e-32 Identity = 73/156 (46.79%), Postives = 94/156 (60.26%), Query Frame = 1 Query: 376 GCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840 G GSA+P + N D IV+TSDEWI RTGIR R + E+ L AA A++ A + P D+DLVL+ TSTP + F A I + LG A+D+ A CSGF+ + +A +IRGG R VLVIG + SR DWTDR +C+LFGD A Sbjct: 8 GIGSALPKRVMKNTDFEGIVETSDEWIVQRTGIRERHIAGEGETTVSLGAAAARAAIENAGLQPSDIDLVLLATSTPNNTFPASAVAIQRELGITRG-FAFDLQAVCSGFIYAITTADLYIRGGMARRVLVIGAETFSRILDWTDRTTCVLFGDGA 162
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_BRUA2 (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Brucella abortus (strain 2308) GN=fabH PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.360e-32 Identity = 73/156 (46.79%), Postives = 94/156 (60.26%), Query Frame = 1 Query: 376 GCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840 G GSA+P + N D IV+TSDEWI RTGIR R + E+ L AA A++ A + P D+DLVL+ TSTP + F A I + LG A+D+ A CSGF+ + +A +IRGG R VLVIG + SR DWTDR +C+LFGD A Sbjct: 8 GIGSALPKRVMKNTDFEGIVETSDEWIVQRTGIRERHIAGEGETTVSLGAAAARAAIENAGLQPSDIDLVLLATSTPNNTFPASAVAIQRELGITRG-FAFDLQAVCSGFIYAITTADLYIRGGMARRVLVIGAETFSRILDWTDRTTCVLFGDGA 162
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_BRUA1 (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Brucella abortus (strain S19) GN=fabH PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.360e-32 Identity = 73/156 (46.79%), Postives = 94/156 (60.26%), Query Frame = 1 Query: 376 GCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840 G GSA+P + N D IV+TSDEWI RTGIR R + E+ L AA A++ A + P D+DLVL+ TSTP + F A I + LG A+D+ A CSGF+ + +A +IRGG R VLVIG + SR DWTDR +C+LFGD A Sbjct: 8 GIGSALPKRVMKNTDFEGIVETSDEWIVQRTGIRERHIAGEGETTVSLGAAAARAAIENAGLQPSDIDLVLLATSTPNNTFPASAVAIQRELGITRG-FAFDLQAVCSGFIYAITTADLYIRGGMARRVLVIGAETFSRILDWTDRTTCVLFGDGA 162
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH1_BACCR (3-oxoacyl-[acyl-carrier-protein] synthase 3 protein 1 OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=fabH1 PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.360e-32 Identity = 70/158 (44.30%), Postives = 105/158 (66.46%), Query Frame = 1 Query: 370 LVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGG-ATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840 ++G G VP ++N DL KI++TSDEWI RTGI RR+ + +AVEA+ +AL+ A ++ ED+DL+L+ T TP+ F A I +A+G K + A D++AAC+GF+ G+++A I+ G ++NVLV+G D LS+ DW DR + +LFGD A Sbjct: 5 ILGIGRYVPEKVVTNHDLEKIMETSDEWIRTRTGIAERRIADDTIDTSYMAVEASKKALEDAGISGEDIDLILVATVTPDRAFPAVACVIQEAIGAK-HAAAMDLSAACAGFMYGMITAQQFIQTGTYKNVLVVGSDKLSKIVDWNDRNTAVLFGDGA 161
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_RICAH (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Rickettsia akari (strain Hartford) GN=fabH PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 3.083e-32 Identity = 66/160 (41.25%), Postives = 104/160 (65.00%), Query Frame = 1 Query: 364 CKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGG-ATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840 CK++GCG +P+ +SND+LAK V+T+DEWI R+GI R + E + LA+++A +A+ A V+ DVDL++ CT+T ++ F AT++ LG N P ++D+ A C+GF+ GL A I G ++ +L+IG + ++ DW DR +C+LFGD A Sbjct: 3 CKIIGCGGYLPSKIVSNDELAKFVETNDEWIRTRSGISQRHIADDNEYTSHLALKSAEQAIADARVSANDVDLIITCTTTSDNSFPSVATKLHGYLGLTNIP-SFDLQAVCAGFVYGLQVADSLIASGKYKTILLIGAEKMTSLLDWNDRSTCVLFGDGA 161
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_GEOKA (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Geobacillus kaustophilus GN=fabH PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 3.083e-32 Identity = 73/161 (45.34%), Postives = 103/161 (63.98%), Query Frame = 1 Query: 361 GCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGG-ATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840 G ++G G VP ++N DL K++DTSDEWI RTGI RR+ + + +A AA RALQ A + +D+DL+L+ T TP+ F A + + LG N A DI+AAC+GF+ G+V+AA I G ++ +LV+G D LS+ TDWTDR + +LFGD A Sbjct: 2 GAGIIGVGRYVPEKVLTNFDLEKMMDTSDEWIRTRTGIEERRIAADDIDTSDMAYFAAKRALQDAGMEAKDIDLILVATVTPDRPFPSVACMLQERLGAV-NAAALDISAACAGFMYGMVTAAQFIDTGAYKYILVVGADKLSKITDWTDRNTAVLFGDGA 161 The following BLAST results are available for this feature:
BLAST of CK936359 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 415
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Sequences
The
following sequences are available for this feature:
EST sequence >CK936359 ID=CK936359; Name=CK936359; organism=Citrus sinensis; type=EST; length=842bpback to top |