CK936359

Overview
NameCK936359
Unique NameCK936359
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length842
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_BRUSU (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Brucella suis GN=fabH PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 8.969e-32
Identity = 72/156 (46.15%), Postives = 93/156 (59.62%), Query Frame = 1
Query:  376 GCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840
            G GSA+P   + N D   IV+TSDEWI  RTGIR R +    E+   L   AA  A++ A + P D+DLVL+ TSTP + F   A  I + LG      A+D+ A CSGF+  + +A  +IRGG  R VLVIG +  S   DWTDR +C+LFGD A
Sbjct:    8 GIGSALPKRVMKNTDFEGIVETSDEWIVQRTGIRERHIAGEGETTVSLGAAAARAAIENAGLQPSDIDLVLLATSTPNNTFPASAVAIQRELGITRG-FAFDLQAVCSGFIYAITTADLYIRGGMARRVLVIGAETFSHILDWTDRTTCVLFGDGA 162          
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_BRUC2 (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=fabH PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 8.969e-32
Identity = 72/156 (46.15%), Postives = 93/156 (59.62%), Query Frame = 1
Query:  376 GCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840
            G GSA+P   + N D   IV+TSDEWI  RTGIR R +    E+   L   AA  A++ A + P D+DLVL+ TSTP + F   A  I + LG      A+D+ A CSGF+  + +A  +IRGG  R VLVIG +  S   DWTDR +C+LFGD A
Sbjct:    8 GIGSALPKRVMKNTDFEGIVETSDEWIVQRTGIRERHIAGEGETTVSLGAAAARAAIENAGLQPSDIDLVLLATSTPNNTFPASAVAIQRELGITRG-FAFDLQAVCSGFIYAITTADLYIRGGMARRVLVIGAETFSHILDWTDRTTCVLFGDGA 162          
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_BRASO (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Bradyrhizobium sp. (strain ORS278) GN=fabH PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 8.969e-32
Identity = 69/158 (43.67%), Postives = 101/158 (63.92%), Query Frame = 1
Query:  370 LVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840
            ++GCGS +P   ++N +LA  ++TSDEWI  RTGIR R V +  E  + LA+ AA  AL  A+V+P+ +DL+++ TSTP++ F   A  +   LG  ++  A+D+ A CSGF+  L +A   +R G F+  LVIG +  SR  DW DR +C+LFGD A
Sbjct:    7 VLGCGSYLPQRVVTNAELASRIETSDEWIVQRTGIRERHVAADGEFTSHLAINAARAALANADVDPQSIDLIVLGTSTPDNTFPATAVAVQNGLGI-HHGAAFDLQAVCSGFVYALATADNFLRSGSFKRALVIGAETFSRILDWNDRTTCVLFGDGA 163          
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_BARQU (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Bartonella quintana GN=fabH PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 8.969e-32
Identity = 70/156 (44.87%), Postives = 96/156 (61.54%), Query Frame = 1
Query:  376 GCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840
            G GSA+P   +SND++AK V+TSD WI  RTGIR R + +  E+   L VEAA  AL  A +  +D+D +++ TSTP   F   A +I  ALG  +   A+DI A CSGF+  L +   ++R G  + +LVIG +  SR  DW DR +C+LFGD A
Sbjct:    8 GVGSALPKKSLSNDEIAKFVETSDSWIVQRTGIRQRYIANENETTVSLGVEAARVALINANLTIKDIDCIILATSTPNHTFPASAVEIQHALGMSHG-FAFDIQAVCSGFIFALTTGDAYLRSGVAKRILVIGSETFSRILDWKDRTTCVLFGDGA 162          
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH1_VIBPA (3-oxoacyl-[acyl-carrier-protein] synthase 3 protein 1 OS=Vibrio parahaemolyticus GN=fabH1 PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 8.969e-32
Identity = 74/159 (46.54%), Postives = 103/159 (64.78%), Query Frame = 1
Query:  367 KLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840
            K++G GS +P+   +N DL K+VDTSDEWI  RTGI+ RR+ +  E++  +A  AA  A+ MA ++  D+DL+++ T++    F   A Q+   LG K  P A+D+ AACSGF+  L  A  HI+ G  +NVLVIG DALS+  D TDR + ILFGD A
Sbjct:    4 KILGTGSYLPSQVRTNADLEKMVDTSDEWIVARTGIKERRIAAEDETVADMAFYAAENAIDMAGIDKNDIDLIIVATTSSSHTFPSSACQVQAKLGIKGCP-AFDLAAACSGFVYALSVADQHIKSGMCKNVLVIGADALSKTCDPTDRSTIILFGDGA 161          
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_RICPR (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Rickettsia prowazekii GN=fabH PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.171e-31
Identity = 65/160 (40.62%), Postives = 104/160 (65.00%), Query Frame = 1
Query:  364 CKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGG-ATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840
            CK++G G  +P   ISND+L K VDT+D+WI  RTGI  R +    E  + LA ++A +A++ A ++ +D+DL+++CT+TP++ F   AT++   LG  N P ++D+ A C+GF+ GL  A   I  G ++ +L+IG + ++   DW DR +C+LFGD A
Sbjct:    3 CKIIGSGGYLPPKIISNDELTKFVDTNDKWIRTRTGILQRHIAGDAEYTSHLAFKSAQKAIEDAMISVDDIDLIIICTTTPDNSFPSVATKLHGYLGLTNIP-SFDLQAVCAGFIYGLQLAHSLIVSGKYKTILLIGAEKMTSLLDWNDRSTCVLFGDGA 161          
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_BART1 (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=fabH PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.530e-31
Identity = 71/156 (45.51%), Postives = 96/156 (61.54%), Query Frame = 1
Query:  376 GCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840
            G GSA+P   +SND+LAK V+TSD WI  RTGI  R + +  E+   L V+AA  AL  A +  +D+D +++ TSTP   F   A +I  ALG  N+  A+DI A CSGF+  L +   ++R G  + +LVIG D  SR  DW DR +C+LFGD A
Sbjct:    8 GVGSALPKRSLSNDELAKFVETSDAWIVQRTGIHQRYIANENETTVSLGVKAAQAALINAGLTIKDIDCIILATSTPNRTFPASAVEIQYALG-MNHGFAFDIQAVCSGFIFALTTGDSYLRCGAAKRILVIGSDTFSRILDWEDRTTCVLFGDGA 162          
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_XYLFA (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Xylella fastidiosa GN=fabH PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.998e-31
Identity = 72/162 (44.44%), Postives = 102/162 (62.96%), Query Frame = 1
Query:  367 KLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPK----ALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840
            ++ G G  +P   ++NDDLA IVDTSDEWI  RTGIR R + +  E+ + LA EAA  AL+ AEV   D+DL+++ T+TP+ +F     + +    A+GC     A+D+ AACSGF+  L  A   +  G  + VLV+G D L+R  DW+DR +C+LFGD A
Sbjct:    8 RIAGTGGYLPEKVLTNDDLAHIVDTSDEWIRTRTGIRERHIAAEGETTSDLAYEAAICALEAAEVRSADLDLIVVGTTTPDLIFPSTACLLQARLGAVGCG----AFDVNAACSGFVYALSVAEKFVSSGCSKTVLVVGADTLTRIIDWSDRTTCVLFGDGA 165          
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_PERMH (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Persephonella marina (strain DSM 14350 / EX-H1) GN=fabH PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.998e-31
Identity = 67/159 (42.14%), Postives = 101/159 (63.52%), Query Frame = 1
Query:  367 KLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840
            ++ G G  +P   ++N DL K +DTSDEWI+ RTGI+ RR+    E  + +A+ AA  A++ A + P+D+D V++ TSTP+  F   A  +   LG  + P+A+DI+AACSGF+ GL  A   I+ G F N+LV+G +  S+  DW DR + ++FGD A
Sbjct:    7 EIKGIGINIPERILTNFDLEKFLDTSDEWITTRTGIKERRIAEEWEKASDIALPAAKEAIENAGLTPKDIDAVIVATSTPDMTFPSTACFLADKLG-SSKPMAFDISAACSGFIYGLTLANSFIKSGQFENILVVGAEVFSQIIDWNDRSTAVIFGDGA 164          
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_OCHA4 (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=fabH PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.998e-31
Identity = 70/156 (44.87%), Postives = 93/156 (59.62%), Query Frame = 1
Query:  376 GCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840
            G GSA+P   + N D   I++TSDEWI  RTGIR R +    E+   L   AA  A++ A + P D+DLVL+ TSTP   F   A +I + LG      A+D+ A CSGF+  + +A  +IRGG  + VLVIG +  SR  DW DR +C+LFGD A
Sbjct:    8 GIGSALPKRVMKNTDFEGIIETSDEWIVQRTGIRERHIAGDDETTVSLGTAAARAAIENAGLQPTDIDLVLLATSTPNHTFPASAVEIQRELGITKG-FAFDMQAVCSGFIYAITTADLYIRGGMAKRVLVIGAETFSRILDWNDRTTCVLFGDGA 162          
The following BLAST results are available for this feature:
BLAST of CK936359 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 415
Match NameE-valueIdentityDescription
FABH_BRUSU8.969e-3246.153-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Bru... [more]
FABH_BRUC28.969e-3246.153-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Bru... [more]
FABH_BRASO8.969e-3243.673-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Bra... [more]
FABH_BARQU8.969e-3244.873-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Bar... [more]
FABH1_VIBPA8.969e-3246.543-oxoacyl-[acyl-carrier-protein] synthase 3 protei... [more]
FABH_RICPR1.171e-3140.633-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Ric... [more]
FABH_BART11.530e-3145.513-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Bar... [more]
FABH_XYLFA1.998e-3144.443-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Xyl... [more]
FABH_PERMH1.998e-3142.143-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Per... [more]
FABH_OCHA41.998e-3144.873-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Och... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004383_D04 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0003_IF_D04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936359 ID=CK936359; Name=CK936359; organism=Citrus sinensis; type=EST; length=842bp
GGGGGTTTTTTCTTGTCATGGTTGTATTCACTCTTTTGAATACATTCTTG
TTCTTTCAAATATAAGCTGAAAAAGATCCTTTTTTTTTGTTGCTTCACTC
GTTTTCCTCTAAATATTCCGAACTTTAATTGGTGTATGTGCGAGTTATAT
AGAGAGTGAAAAATGGCAAGTGCATCTGGGCTGTTTACACCTTCAGTTCC
AAGCCTGAGGAGGAGGGTTCAGCCTTCAACATGGAAATATCGATCTGGGT
TTTGCTTCTCTCAGGGAACCTTTAGGAGGGTACTGTGCTCCAGCACCATT
GCTGGTTCTGAGAAGAGTGTGTCTTCTTCCGAATCTAGAGCACCCAGACT
CATCAATAGAGGGTGCAAGTTGGTTGGATGTGGCTCAGCAGTGCCAACTC
TTCAGATTTCCAATGATGATCTCGCAAAAATAGTTGACACTTCTGATGAA
TGGATCTCTGTTCGAACTGGGATTCGAAATCGACGCGTTCTATCAGGCAA
AGAAAGCTTGACTGGTCTAGCTGTAGAGGCAGCAAGTAGAGCTCTTCAGA
TGGCAGAGGTGAACCCTGAAGATGTTGACCTTGTGTTGATGTGCACATCT
ACTCCAGAGGATCTTTTCGGTGGTGCTACTCAGATTCCAAAGGCACTTGG
CTGCAAAAACAATCCTTTAGCTTACGATATTACAGCTGCATGTAGTGGAT
TTCTTTTGGGTCTTGTCTCAGCCGCTTGTCATATTAGGGGAGGCGGGTTT
CGCAATGTTCTAGTGATTGGGGGTGATGCTCTTTCTCGATTTACTGATTG
GACGGATAGAGGATCCTGCATTCTGTTTGGGGATGCTGCGGG
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