CK936359

Overview
NameCK936359
Unique NameCK936359
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length842
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_MESSB (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Mesorhizobium sp. (strain BNC1) GN=fabH PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.408e-31
Identity = 70/156 (44.87%), Postives = 97/156 (62.18%), Query Frame = 1
Query:  376 GCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840
            G G+A+P   ++N DL   ++TSDEWI  RTGIR R + S  E+   L   AA RAL  A + P D+DL+++ TSTP + F   A +I + LG +    A+D+ A CSGF+  + +A  +IRGG  +  LVIG +  SR  DWTDR +C+LFGD A
Sbjct:    8 GVGAALPRRVVTNKDLETRLETSDEWIVQRTGIRQRHIASDDETTASLGEAAALRALDAAGLAPADIDLIVVATSTPNNTFPATAVEIQERLGIRQG-FAFDMQAVCSGFVYAVTTADLYIRGGMAKRALVIGAETFSRILDWTDRTTCVLFGDGA 162          
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_EHRRG (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Ehrlichia ruminantium (strain Gardel) GN=fabH PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.408e-31
Identity = 71/162 (43.83%), Postives = 101/162 (62.35%), Query Frame = 1
Query:  358 RGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGG-ATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840
            R  +++G GS +P   ++ND+LA  V+TSDEWI  RTGIR R + +  +  + +AVEAA  AL  + +N +DVDL+++ T+TP+  F   AT +   L CKN   A+DI A CSGF+  +  A   I+ G     LVIG + +SR  DW DR +C+LFGD A
Sbjct:    2 RRSRILGIGSYLPKSLVTNDELACTVETSDEWIVKRTGIRQRYIAADDQMTSDMAVEAAKLALNDSGINKQDVDLIVVATTTPDRTFPSCATIVQSKLECKN-AFAFDIQAVCSGFIYAMAIADNFIKSGQVNVSLVIGAEVMSRILDWKDRSTCVLFGDGA 162          
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_XANAC (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Xanthomonas axonopodis pv. citri GN=fabH PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.451e-31
Identity = 68/162 (41.98%), Postives = 105/162 (64.81%), Query Frame = 1
Query:  367 KLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKA----LGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840
            ++ G GS +P   ++NDD++KIVDTSDEWI  RTGIR R +++  ++ + LA  A+ RA++ A V  +++DL+++ T+TP+ +F     + +A    +GC     A D+ AACSGF+  L  A   +R G  + VLV+G + L+R  DWTDR +C+LFGD A
Sbjct:    8 RIAGTGSYLPEKVLTNDDMSKIVDTSDEWIFSRTGIRERHIVADDQTTSDLAYFASLRAMEAAGVTADEIDLIVIGTTTPDLIFPSTACLLQARLGNIGCG----AMDVNAACSGFVYALSVADKFVRSGDAKTVLVVGAETLTRIVDWTDRTTCVLFGDGA 165          
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_RICTY (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Rickettsia typhi GN=fabH PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.451e-31
Identity = 64/160 (40.00%), Postives = 103/160 (64.38%), Query Frame = 1
Query:  364 CKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGG-ATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840
            CK++G G  +P   ISND+L K VDT+D+WI  RTGI  R +    E  + LA+++A +A++ A ++ +D+DL++ CT+TP++ F   AT++   LG  N P ++D+ A C+GF+ GL      I  G ++ +L+IG + ++   DW DR +C+LFGD A
Sbjct:    3 CKIIGSGGYLPQKIISNDELTKFVDTNDKWIRTRTGIFQRHIAGDTEYTSHLALKSAQKAIEDAMISVDDIDLIITCTTTPDNSFPSVATKLHGYLGLTNIP-SFDLQAVCAGFIYGLQLTNSLIVSGKYKTILLIGAEKMTSLLDWNDRSTCVLFGDGA 161          
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_RALSO (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Ralstonia solanacearum GN=fabH PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.451e-31
Identity = 69/169 (40.83%), Postives = 107/169 (63.31%), Query Frame = 1
Query:  352 INRGCKLVGCGSAVPTLQISNDDLA-----KIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840
            + R  +++G GS +P  +++N +LA     + ++TSDEWI  R+GIR R       + + LA +AA RA++ A ++  ++DL+L+ TSTP+ +F   A  + + LG  N+  A+D+ A CSGF+ GL +A   IR GG+RN LVIG +  SR  D+ DR +C+LFGD A
Sbjct:    1 MTRYARIIGTGSYLPPKRVTNHELAAQLAEQGIETSDEWIVTRSGIRARHYAEPDVTCSDLAAKAAERAIEAAGIDRAEIDLILVATSTPDFVFPSAACLVQQKLGLSNHCAAFDLQAVCSGFVYGLATADKFIRAGGYRNALVIGAEVFSRILDFNDRTTCVLFGDGA 169          
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_COXB2 (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Coxiella burnetii (strain CbuG_Q212) GN=fabH PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.451e-31
Identity = 69/160 (43.12%), Postives = 107/160 (66.88%), Query Frame = 1
Query:  367 KLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGK-ESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGG-ATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840
            ++ G GS +P   +SN DL K+V+T+DEWI  R G+R R V++   ++ T +AV+AA RA++MAE++P  +D++++ T+T E  F   A  + K L  + +  A+DI AAC+GF+  L  A  +IR  G +++LVIG D+L++  DW DR +CILFGD A
Sbjct:    5 RIQGVGSYIPQQILSNADLEKMVNTTDEWIMQRVGVRERHVIANSPDNTTTMAVDAAKRAIEMAEIDPAVIDMIIVGTATAEYYFPSTACLVQKHLNLREDIPAFDINAACAGFVYALSIADQYIRNEGAKHILVIGVDSLTKVVDWKDRSTCILFGDGA 164          
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_AZOSB (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Azoarcus sp. (strain BH72) GN=fabH PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.451e-31
Identity = 70/160 (43.75%), Postives = 98/160 (61.25%), Query Frame = 1
Query:  367 KLVGCGSAVPTLQISNDDL-AKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGG-ATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840
            ++ G GS +P   +SNDDL A+ +DTSD+W+  RTGIR R +       + LA+ AA RA++ A     D+DL+++ TSTP+ +F   AT +   LG  NN  A+D+ A CSGF+  L  A   IR G  +  LV+G +  SR  DWTDR +C+LFGD A
Sbjct:    5 RIAGTGSYLPGNPVSNDDLVARGIDTSDDWVVSRTGIRTRYLAPPDVGSSDLALVAAQRAIEAAGCAANDIDLIIVATSTPDYIFPSTATLLQSKLGIGNNGAAFDVQAVCSGFVYALSIAEKFIRSGSHKRALVVGAEVFSRILDWTDRATCVLFGDGA 164          
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_XANC5 (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=fabH PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 5.813e-31
Identity = 68/162 (41.98%), Postives = 105/162 (64.81%), Query Frame = 1
Query:  367 KLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKA----LGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840
            ++ G GS +P   ++NDD++KIVDTSDEWI  RTGIR R +++  ++ + LA  A+ +A++ A V  E++DL+++ T+TP+ +F     + +A    +GC     A D+ AACSGF+  L  A   +R G  + VLV+G + L+R  DWTDR +C+LFGD A
Sbjct:    8 RIAGTGSYLPEKVLTNDDMSKIVDTSDEWIFSRTGIRERHIVADDQTTSDLAYFASLKAMEAAGVTAEEIDLIVIGTTTPDLIFPSTACLLQARLGNVGCG----AMDVNAACSGFVYALSVADKFVRSGDAKTVLVVGAETLTRIVDWTDRTTCVLFGDGA 165          
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_EHRCJ (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Ehrlichia canis (strain Jake) GN=fabH PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 5.813e-31
Identity = 68/158 (43.04%), Postives = 97/158 (61.39%), Query Frame = 1
Query:  370 LVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGG-ATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840
            ++G GS +P   ++ND+L   ++TSDEWI  RTGI+ R +    E  + +A  AA  AL  A ++  ++DL+++ T+TP+  F   AT +   LGCKN   A+DI A CSGF+  L  A   I+ G  R VLVIG + +SR  DW DR +C+LFGD A
Sbjct:    6 ILGIGSYLPKKVVTNDELTLTIETSDEWIVKRTGIKQRHIAEDNEMTSDMATSAAKLALDNAGIDKNEIDLIIVATTTPDRTFPSCATIVQSKLGCKN-AFAFDIQAVCSGFVYALSIADNFIKSGQVRTVLVIGAEIMSRILDWQDRSTCVLFGDGA 162          
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_BARBK (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=fabH PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 5.813e-31
Identity = 68/158 (43.04%), Postives = 96/158 (60.76%), Query Frame = 1
Query:  370 LVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840
            + G GSA+P  ++SND++AK V+TSD WI  RTGI  R + S  E+   L +EAA  AL  A +  +D+D +++ TSTP   F   A +I  ALG  +   ++D+ A CSGF+  L     ++R G  + VLVIG +  SR  DW DR +C+LFGD A
Sbjct:    6 MCGVGSALPKKKLSNDEIAKFVETSDSWIVQRTGIHQRYIASENETTVSLGIEAAQVALTNAGMTIKDIDCIILATSTPNRTFPSSAVEIQHALGMSHG-FSFDVQAVCSGFIFALTIGDVYLRSGEAKRVLVIGSETFSRILDWKDRTTCVLFGDGA 162          
The following BLAST results are available for this feature:
BLAST of CK936359 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 415
Match NameE-valueIdentityDescription
FABH_MESSB3.408e-3144.873-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Mes... [more]
FABH_EHRRG3.408e-3143.833-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Ehr... [more]
FABH_XANAC4.451e-3141.983-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Xan... [more]
FABH_RICTY4.451e-3140.003-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Ric... [more]
FABH_RALSO4.451e-3140.833-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Ral... [more]
FABH_COXB24.451e-3143.133-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Cox... [more]
FABH_AZOSB4.451e-3143.753-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Azo... [more]
FABH_XANC55.813e-3141.983-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Xan... [more]
FABH_EHRCJ5.813e-3143.043-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Ehr... [more]
FABH_BARBK5.813e-3143.043-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Bar... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004383_D04 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0003_IF_D04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936359 ID=CK936359; Name=CK936359; organism=Citrus sinensis; type=EST; length=842bp
GGGGGTTTTTTCTTGTCATGGTTGTATTCACTCTTTTGAATACATTCTTG
TTCTTTCAAATATAAGCTGAAAAAGATCCTTTTTTTTTGTTGCTTCACTC
GTTTTCCTCTAAATATTCCGAACTTTAATTGGTGTATGTGCGAGTTATAT
AGAGAGTGAAAAATGGCAAGTGCATCTGGGCTGTTTACACCTTCAGTTCC
AAGCCTGAGGAGGAGGGTTCAGCCTTCAACATGGAAATATCGATCTGGGT
TTTGCTTCTCTCAGGGAACCTTTAGGAGGGTACTGTGCTCCAGCACCATT
GCTGGTTCTGAGAAGAGTGTGTCTTCTTCCGAATCTAGAGCACCCAGACT
CATCAATAGAGGGTGCAAGTTGGTTGGATGTGGCTCAGCAGTGCCAACTC
TTCAGATTTCCAATGATGATCTCGCAAAAATAGTTGACACTTCTGATGAA
TGGATCTCTGTTCGAACTGGGATTCGAAATCGACGCGTTCTATCAGGCAA
AGAAAGCTTGACTGGTCTAGCTGTAGAGGCAGCAAGTAGAGCTCTTCAGA
TGGCAGAGGTGAACCCTGAAGATGTTGACCTTGTGTTGATGTGCACATCT
ACTCCAGAGGATCTTTTCGGTGGTGCTACTCAGATTCCAAAGGCACTTGG
CTGCAAAAACAATCCTTTAGCTTACGATATTACAGCTGCATGTAGTGGAT
TTCTTTTGGGTCTTGTCTCAGCCGCTTGTCATATTAGGGGAGGCGGGTTT
CGCAATGTTCTAGTGATTGGGGGTGATGCTCTTTCTCGATTTACTGATTG
GACGGATAGAGGATCCTGCATTCTGTTTGGGGATGCTGCGGG
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