CX046849
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX046849 vs. ExPASy Swiss-Prot
Match: MNHD1_STAA3 (Na(+)/H(+) antiporter subunit D1 OS=Staphylococcus aureus (strain USA300) GN=mnhD1 PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.212e-13 Identity = 52/205 (25.37%), Postives = 99/205 (48.29%), Query Frame = -3 Query: 12 LYMWAPDIYEGSPTPVTAFL-SIAPKISISANISRVFIYGSYGATLQQ-IFFFCSIASMILGALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGIFIYAL--MTIDAFAIVLALRQTRVKYIADL---GALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAPVGVVTSVIGRWAAGRL 605 +++W P Y P P+ AF ++ K+ + A + ++ S + + F ++ ++I G + A+A +K+++ ++ + VG I G + T G +IG Y L M + +L ++ ADL G L K P+ +F I S AGIPPL+GF KF++ + G Y + +++S++ ++ R+ Sbjct: 229 MFVWLPSAYYAPPIPIIAFFGALLTKVGVYAIARTLSLFFSDNVSFSHYVILFLALLTIIFGCVGAVAYANIKKIILYNVMIAVGVILVGVAMMTESG----MIGAIYYTLHDMLVKLALFLLIGIMIKITGTADLRQFGGLIKRYPVLGWSFFIAALSLAGIPPLSGFYGKFFIVQSTFERGFYLSGVIVLLSSLVVLYSVIRI 429
BLAST of CX046849 vs. ExPASy Swiss-Prot
Match: MNHD1_STAA2 (Na(+)/H(+) antiporter subunit D1 OS=Staphylococcus aureus (strain JH1) GN=mnhD1 PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.212e-13 Identity = 52/205 (25.37%), Postives = 99/205 (48.29%), Query Frame = -3 Query: 12 LYMWAPDIYEGSPTPVTAFL-SIAPKISISANISRVFIYGSYGATLQQ-IFFFCSIASMILGALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGIFIYAL--MTIDAFAIVLALRQTRVKYIADL---GALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAPVGVVTSVIGRWAAGRL 605 +++W P Y P P+ AF ++ K+ + A + ++ S + + F ++ ++I G + A+A +K+++ ++ + VG I G + T G +IG Y L M + +L ++ ADL G L K P+ +F I S AGIPPL+GF KF++ + G Y + +++S++ ++ R+ Sbjct: 229 MFVWLPSAYYAPPIPIIAFFGALLTKVGVYAIARTLSLFFSDNVSFSHYVILFLALLTIIFGCVGAVAYANIKKIILYNVMIAVGVILVGVAMMTESG----MIGAIYYTLHDMLVKLALFLLIGIMIKITGTADLRQFGGLIKRYPVLGWSFFIAALSLAGIPPLSGFYGKFFIVQSTFERGFYLSGVIVLLSSLVVLYSVIRI 429
BLAST of CX046849 vs. ExPASy Swiss-Prot
Match: MNHD1_STAA1 (Na(+)/H(+) antiporter subunit D1 OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=mnhD1 PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.212e-13 Identity = 52/205 (25.37%), Postives = 99/205 (48.29%), Query Frame = -3 Query: 12 LYMWAPDIYEGSPTPVTAFL-SIAPKISISANISRVFIYGSYGATLQQ-IFFFCSIASMILGALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGIFIYAL--MTIDAFAIVLALRQTRVKYIADL---GALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAPVGVVTSVIGRWAAGRL 605 +++W P Y P P+ AF ++ K+ + A + ++ S + + F ++ ++I G + A+A +K+++ ++ + VG I G + T G +IG Y L M + +L ++ ADL G L K P+ +F I S AGIPPL+GF KF++ + G Y + +++S++ ++ R+ Sbjct: 229 MFVWLPSAYYAPPIPIIAFFGALLTKVGVYAIARTLSLFFSDNVSFSHYVILFLALLTIIFGCVGAVAYANIKKIILYNVMIAVGVILVGVAMMTESG----MIGAIYYTLHDMLVKLALFLLIGIMIKITGTADLRQFGGLIKRYPVLGWSFFIAALSLAGIPPLSGFYGKFFIVQSTFERGFYLSGVIVLLSSLVVLYSVIRI 429
BLAST of CX046849 vs. ExPASy Swiss-Prot
Match: NU5C_RANMC (NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic OS=Ranunculus macranthus GN=ndhF PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.582e-13 Identity = 51/173 (29.48%), Postives = 90/173 (52.02%), Query Frame = -3 Query: 111 LYMWAPDIYEGSPTPVTAFLSIAPKISISAN-ISRVFIYGSYGATLQQIFFFCSIASMILGALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCGTIE-GIQSLLIGIFIYALMTIDAFAIVLALRQT------RVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSK 605 L++W PD EG PTP++A + A ++ ++R+F + + I I +++LGA A+AQ +KR LA+S++ +GYI G+ + L+ + AL+ + + +I+ ++ + + +A +G L K PI+ +F + S GIPPLA F SK Sbjct: 246 LHVWLPDAMEG-PTPISALIHAATMVAAGIFLVARLFPLFTVIPYIMNIIALVGIITLLLGATLALAQRDIKRSLAYSTMSQLGYIMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMENVVGYSPDKSQNMALMGGLTKYAPITKTSFLLGTLSLCGIPPLACFWSK 417
BLAST of CX046849 vs. ExPASy Swiss-Prot
Match: NU5C_CHAGL (NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic OS=Chaetosphaeridium globosum GN=ndhF PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.582e-13 Identity = 52/173 (30.06%), Postives = 88/173 (50.87%), Query Frame = -3 Query: 111 LYMWAPDIYEGSPTPVTAFLSIAPKISISAN-ISRVFIYGSYGATLQQIFFFCSIASMILGALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCGTIE-GIQSLLIGIFIYALMTIDAFAIVLALR------QTRVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSK 605 L++W PD EG PTP++A + A ++ ++R+ L + F + +LGA A+AQT +KR LA+S++ +GY+ G G + I L+ + AL+ + + +++ ++ + + I +G L K PI+ +TF I S GIPP A F SK Sbjct: 246 LHIWLPDAMEG-PTPISALIHAATMVAAGIFLVARLLPIFQLSPLLMILIAFTGAITALLGACLAVAQTDLKRGLAYSTMSQLGYMMLGLGIGGYQAAIFHLITHAYSKALLFLGSGSVIHSMEPVVGYDPNKSQNIDYMGGLRKYMPITGVTFLIGTLSLCGIPPFACFWSK 417
BLAST of CX046849 vs. ExPASy Swiss-Prot
Match: MNHD2_STAHJ (Putative antiporter subunit mnhD2 OS=Staphylococcus haemolyticus (strain JCSC1435) GN=mnhD2 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.582e-13 Identity = 50/212 (23.58%), Postives = 97/212 (45.75%), Query Frame = -3 Query: 12 GSISLLTLYMWAPDIYEGSPTPVTA-FLSIAPKISISANISRVF--IYGSYGATLQQIFFFCSIASMILGALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCGTIEGIQSLLI----GIFIYALMTIDAFAIVLALRQTRVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAPVGVVTSVIGRWAAGRL 626 GS + L L+MW P Y T + A F ++ K+ A I R F ++ + + F S +M++GA +A +K++ ++ I +G++ G T G+ + I + ++ ++V KY+ LAK P + F + +F+ G+PP +GF K +F A+ G + + ++TS++ ++ R+ Sbjct: 218 GSKAALVLFMWLPKAYAVLNTELAALFAALMTKVGAYALI-RFFTLLFDQHTGVTHPLLVFMSCITMLIGAFGVIAYRDIKKVASYQVILSIGFVILGLGSNTFAGVHGAIFYLANDIIVKTMLFFIIGSLVYMSGYREYKYLC---GLAKKEPFFGVAFVVMIFAIGGVPPFSGFPGKVLIFQGAIENGNFIGLALMIITSLLAMYSLFRI 425
BLAST of CX046849 vs. ExPASy Swiss-Prot
Match: NU5C_CARCG (NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic OS=Carpenteria californica GN=ndhF PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.067e-13 Identity = 55/177 (31.07%), Postives = 92/177 (51.98%), Query Frame = -3 Query: 111 LYMWAPDIYEGSPTPVTAFLS----IAPKISISANISRVFIYGSYGATLQQIFFFCSIASMILGALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCGTI-EGIQSLLIGIFIYALMTIDAFAIVLALRQTRVKYIAD-------LGALAKTNPISAITFSITMFSYAGIPPLAGFCSK 605 L++W PD EG PTP++A + +A I + A + +FI Y + + F I +++LGA A+AQ +KR LA+S++ +GY+ G+ + L+ + AL+ + + +++ ++ +T V Y D +G L K PI+ F + S GIPPLA F SK Sbjct: 246 LHVWLPDAMEG-PTPISALIHAATMVAAGIFLVARLLPLFIVIPY---ILNLISFIGIITLLLGATLALAQKDIKRSLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYPKALLFLGSGSVIHSM-ETVVGYSPDKSQNMVLMGGLTKHVPITKTAFFLGTLSLCGIPPLACFWSK 417
BLAST of CX046849 vs. ExPASy Swiss-Prot
Match: NUOM_RICPR (NADH-quinone oxidoreductase subunit M OS=Rickettsia prowazekii GN=nuoM PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.525e-13 Identity = 54/199 (27.14%), Postives = 96/199 (48.24%), Query Frame = -3 Query: 36 LLTLYMWAPDIYEGSPTPVTAFLS-IAPKISISANISRVFIYGSYGATLQQIFF--FCSIASMILGALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGIFIYALMTIDAFAIVLAL-RQTRVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKF--YLFFAALGCGAYFLAPVGVVTSVI 614 ++ + W PD + +PT + L+ I K+ RV + A+ + + + S+ ++I +L A+AQ +K+++A+SSI H+GY+ G T GI + + + +++ F IV L + K IA G +A PI A F I M S G+P +GF +F L + F+A +G++ + Sbjct: 229 MIPFHTWLPDAHVQAPTTGSVILAGILLKLG-GYGFLRVLLPLFPNASQEFAIYVIYLSVIAIIYASLVALAQKDIKQMIAYSSIAHMGYVTIGIFSFTEIGISGAIFQMLSHGIISSSLFLIVGTLYERLHTKEIAKYGGVANKMPILATFFMIAMLSSIGLPSTSGFIGEFLSLLGIYKVNVVTAFIAALGIILGAV 426
BLAST of CX046849 vs. ExPASy Swiss-Prot
Match: NUOM_RICBR (NADH-quinone oxidoreductase subunit M OS=Rickettsia bellii (strain RML369-C) GN=nuoM PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.525e-13 Identity = 56/201 (27.86%), Postives = 97/201 (48.26%), Query Frame = -3 Query: 36 ISLLTLYMWAPDIYEGSPTPVTAFLS-IAPKISISANISRVFIYGSYGATLQQIFF--FCSIASMILGALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGIFIYALMTIDAFAIVLAL-RQTRVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKF--YLFFAALGCGAYFLAPVGVVTSVI 620 I ++ + W PD + +PT + L+ I K+ RV + A+ + + + S+ ++I +L A+AQ +K+++A+SSI H+GY+ G T G+ L + + +++ F IV L + K IA G +A P+ A F I M G+P +GF +F L + A FLA +G++ I Sbjct: 229 IPMIPFHTWLPDAHVQAPTSGSVILAGILLKLG-GYGFLRVLLPLLPNASQEFAIYVIWLSVIAIIYASLVALAQKDMKKMIAYSSITHMGYVTIGIFSFTDSGVSGALFQMLSHGIISSCLFLIVGTLYERLHTKEIAKYGGVASKMPVLATFFMIAMLGSVGLPGTSGFIGEFLSLLGIYKVNVIATFLAALGIILGAI 428
BLAST of CX046849 vs. ExPASy Swiss-Prot
Match: NU5C_PIPCE (NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic OS=Piper cenocladum GN=ndhF PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.525e-13 Identity = 59/180 (32.78%), Postives = 93/180 (51.67%), Query Frame = -3 Query: 111 LYMWAPDIYEGSPTPVTAFLS----IAPKISISANISRVFIYGSYGATLQQIFFFCS---IASMILGALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCGTIE-GIQSLLIGIFIYALMTIDAFAIVLALRQTRVKYIAD-------LGALAKTNPISAITFSITMFSYAGIPPLAGFCSK 605 L++W PD EG PTP++A + +A I + A + +FI L I +F S I +++LGA A+AQ +KR LA+S++ +GYI G+ + L+ + AL+ + + +I+ ++ + V Y D +G L K PI+ TF + S GIPPLA F SK Sbjct: 246 LHVWLPDAMEG-PTPISALIHAATMVAAGIFLVARLFPLFI------NLPYIMYFISLIGIITVLLGATLALAQRDIKRSLAYSTMSQLGYIMLAMGIGSYRAALFHLITHAYSKALLFLGSGSIIHSM-EPIVGYSPDKSQNMVLMGGLTKYVPITKTTFLLGTLSLCGIPPLACFWSK 417 The following BLAST results are available for this feature:
BLAST of CX046849 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX046849 ID=CX046849; Name=CX046849; organism=Citrus sinensis; type=EST; length=652bpback to top |