CX046849
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX046849 vs. ExPASy Swiss-Prot
Match: NU2C_MARPO (NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic OS=Marchantia polymorpha GN=ndhB PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 8.071e-34 Identity = 82/202 (40.59%), Postives = 117/202 (57.92%), Query Frame = -3 Query: 36 LSGSISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISISANISRVF-IYGSYGATLQQIFF-FCSIASMILGALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGIFIYALMTIDAFA-IVLALRQTRVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAPVGVVTSVI 632 L+ +SL+ + W PDIYEGSPTPV AFLS+ KI+ A +R+ I S+ +IF +I SMILG L A+ QT +KR+LA+SSI +GYI G G ++G S+ I +F Y M + FA I+L +T I D L +P+ + + ++ + S G+PPL GF K YLF+ G Y L + ++TSVI Sbjct: 223 LAFKLSLVPFHQWTPDIYEGSPTPVVAFLSVTSKIAGLALATRILNILFSFSPNEWKIFLEILAILSMILGNLVAITQTSMKRMLAYSSISQIGYILIGLITGDLKGYTSMTIYVFFYIFMNLGTFACIILYSLRTGTDNIRDYAGLYIKDPLLSFSLTLCLLSLGGLPPLTGFFGKLYLFWCGWQSGFYLLVFIALITSVI 424
BLAST of CX046849 vs. ExPASy Swiss-Prot
Match: NU2C_CYAP7 (NAD(P)H-quinone oxidoreductase subunit 2 OS=Cyanothece sp. (strain PCC 7424) GN=ndhB PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 8.071e-34 Identity = 80/198 (40.40%), Postives = 116/198 (58.59%), Query Frame = -3 Query: 36 ISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISISANISRVFIYGSYGATLQQIFFFCSIA--SMILGALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGIFIYALMTIDAF-AIVLALRQTRVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAPVGVVTSVI 620 IS + + W PD+YEGSPTPV AFLS+ K + A R+ + + Q F F ++A SM+LG + A+AQT +KR+LA+SSIG G++ G + + G S++ + IY M + AF I+L +T I++ L + +P+ + SI + S GIPPLAGF K YLF+A G Y L +G+VTSVI Sbjct: 228 ISAVPFHQWTPDVYEGSPTPVVAFLSVGSKAAGFALAIRLLVTAFALVSEQWHFIFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVMIGLTANSDAGYSSMIFYLLIYLFMNLGAFICIILFALRTGTDQISEYSGLYQKDPLLTLGLSICLLSLGGIPPLAGFFGKIYLFWAGWQSGLYGLVLLGLVTSVI 425
BLAST of CX046849 vs. ExPASy Swiss-Prot
Match: NU2C2_ACOCL (NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic OS=Acorus calamus GN=ndhB2 PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 8.071e-34 Identity = 79/199 (39.70%), Postives = 119/199 (59.80%), Query Frame = -3 Query: 36 ISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISISANISRVFIYGSYGATLQQ--IFFFCSIASMILGALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCG-TIEGIQSLLIGIFIYALMTIDAFA-IVLALRQTRVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAPVGVVTSVI 620 +SL + W PD+YEGSPTPV AFLS+ K++ SA+ +R+F Y ++ + + +I SMILG L A+ QT +KR+LA+SSIG +GY+ G G + +G S++ + Y M + FA IVL +T I D L +P A++ ++ + S G+PPLAGF K +LF+ G YFL +G++TSV+ Sbjct: 244 LSLAPFHQWTPDVYEGSPTPVVAFLSVTSKVAASASATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYMLFYISMNLGTFARIVLFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFWCGWQAGLYFLVSIGLLTSVV 442
BLAST of CX046849 vs. ExPASy Swiss-Prot
Match: NU2C2_ACOAM (NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic OS=Acorus americanus GN=ndhB2 PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 8.071e-34 Identity = 79/199 (39.70%), Postives = 119/199 (59.80%), Query Frame = -3 Query: 36 ISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISISANISRVFIYGSYGATLQQ--IFFFCSIASMILGALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCG-TIEGIQSLLIGIFIYALMTIDAFA-IVLALRQTRVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAPVGVVTSVI 620 +SL + W PD+YEGSPTPV AFLS+ K++ SA+ +R+F Y ++ + + +I SMILG L A+ QT +KR+LA+SSIG +GY+ G G + +G S++ + Y M + FA IVL +T I D L +P A++ ++ + S G+PPLAGF K +LF+ G YFL +G++TSV+ Sbjct: 244 LSLAPFHQWTPDVYEGSPTPVVAFLSVTSKVAASASATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYMLFYISMNLGTFARIVLFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFWCGWQAGLYFLVSIGLLTSVV 442
BLAST of CX046849 vs. ExPASy Swiss-Prot
Match: NU2C1_ACOCL (NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic OS=Acorus calamus GN=ndhB1 PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 8.071e-34 Identity = 79/199 (39.70%), Postives = 119/199 (59.80%), Query Frame = -3 Query: 36 ISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISISANISRVFIYGSYGATLQQ--IFFFCSIASMILGALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCG-TIEGIQSLLIGIFIYALMTIDAFA-IVLALRQTRVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAPVGVVTSVI 620 +SL + W PD+YEGSPTPV AFLS+ K++ SA+ +R+F Y ++ + + +I SMILG L A+ QT +KR+LA+SSIG +GY+ G G + +G S++ + Y M + FA IVL +T I D L +P A++ ++ + S G+PPLAGF K +LF+ G YFL +G++TSV+ Sbjct: 244 LSLAPFHQWTPDVYEGSPTPVVAFLSVTSKVAASASATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYMLFYISMNLGTFARIVLFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFWCGWQAGLYFLVSIGLLTSVV 442
BLAST of CX046849 vs. ExPASy Swiss-Prot
Match: NU2C1_ACOAM (NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic OS=Acorus americanus GN=ndhB1 PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 8.071e-34 Identity = 79/199 (39.70%), Postives = 119/199 (59.80%), Query Frame = -3 Query: 36 ISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISISANISRVFIYGSYGATLQQ--IFFFCSIASMILGALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCG-TIEGIQSLLIGIFIYALMTIDAFA-IVLALRQTRVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAPVGVVTSVI 620 +SL + W PD+YEGSPTPV AFLS+ K++ SA+ +R+F Y ++ + + +I SMILG L A+ QT +KR+LA+SSIG +GY+ G G + +G S++ + Y M + FA IVL +T I D L +P A++ ++ + S G+PPLAGF K +LF+ G YFL +G++TSV+ Sbjct: 244 LSLAPFHQWTPDVYEGSPTPVVAFLSVTSKVAASASATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYMLFYISMNLGTFARIVLFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFWCGWQAGLYFLVSIGLLTSVV 442
BLAST of CX046849 vs. ExPASy Swiss-Prot
Match: NU2C2_NYMAL (NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic OS=Nymphaea alba GN=ndhB2 PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.054e-33 Identity = 80/199 (40.20%), Postives = 118/199 (59.30%), Query Frame = -3 Query: 36 ISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISISANISRVFIYGSYGATLQQ--IFFFCSIASMILGALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCG-TIEGIQSLLIGIFIYALMTIDAFA-IVLALRQTRVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAPVGVVTSVI 620 +S + W PD+YEGSPTPV AFLS+ K++ SA+ +R+F Y ++ + + +I SMILG L A+ QT +KR+LA+SSIG +GY+ G G + +G S++ + Y M + FA IVL +T I D L +P A++ ++ + S GIPPLAGF K YLF+ G YFL +G++TSV+ Sbjct: 244 LSPAPFHQWTPDVYEGSPTPVVAFLSVTSKVAASASATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYMLFYIAMNLGTFACIVLFGLRTGTDNIRDYAGLYTKDPFLALSSALCLLSLGGIPPLAGFFGKLYLFWCGWQAGLYFLVSIGLLTSVV 442
BLAST of CX046849 vs. ExPASy Swiss-Prot
Match: NU2C1_NYMAL (NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic OS=Nymphaea alba GN=ndhB1 PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.054e-33 Identity = 80/199 (40.20%), Postives = 118/199 (59.30%), Query Frame = -3 Query: 36 ISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISISANISRVFIYGSYGATLQQ--IFFFCSIASMILGALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCG-TIEGIQSLLIGIFIYALMTIDAFA-IVLALRQTRVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAPVGVVTSVI 620 +S + W PD+YEGSPTPV AFLS+ K++ SA+ +R+F Y ++ + + +I SMILG L A+ QT +KR+LA+SSIG +GY+ G G + +G S++ + Y M + FA IVL +T I D L +P A++ ++ + S GIPPLAGF K YLF+ G YFL +G++TSV+ Sbjct: 244 LSPAPFHQWTPDVYEGSPTPVVAFLSVTSKVAASASATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYMLFYIAMNLGTFACIVLFGLRTGTDNIRDYAGLYTKDPFLALSSALCLLSLGGIPPLAGFFGKLYLFWCGWQAGLYFLVSIGLLTSVV 442
BLAST of CX046849 vs. ExPASy Swiss-Prot
Match: NUON_ANAD2 (NADH-quinone oxidoreductase subunit N OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=nuoN PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.377e-33 Identity = 83/216 (38.43%), Postives = 122/216 (56.48%), Query Frame = -3 Query: 27 ISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISISANISRVFIYGSYGA-----TLQQIFFFCSIASMILGALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCGTIEG-----IQSLLIGIFIYALMTIDAFAIVLAL-RQTRVKY-------IADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAPVGVVTSVIGRW 620 I+ + + W PD+YEG+PTPVTAF++ K + A + R+F+ G+ +L + ++ +MI G L A+ Q VKR+LA+SSIGH GY+ G + G + LL + Y I AFA+V AL R+TR + + LA+ P A ++ +FS AG+PP AGF KFY+F AA+G G Y LA +GV+TSV+G + Sbjct: 215 IAAVPFHAWTPDVYEGAPTPVTAFMAAGVKTAAFAVLVRLFLATESGSAAMSTSLGTVLSALAVLTMIFGNLLALPQRSVKRMLAYSSIGHAGYLLVGVVSAVVAGARDKALAGLLFYLAAYTATVIGAFAVVGALERRTRGDFEPADAWDLDRFAGLARRRPALAFAMAVFLFSLAGVPPTAGFIGKFYIFKAAMGAGLYGLAVLGVLTSVLGAY 430
BLAST of CX046849 vs. ExPASy Swiss-Prot
Match: NU2C2_IPOPU (NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic OS=Ipomoea purpurea GN=ndhB2 PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.377e-33 Identity = 79/193 (40.93%), Postives = 117/193 (60.62%), Query Frame = -3 Query: 36 YMWAPDIYEGSPTPVTAFLSIAPKISISANISRVFIYGSYGATLQQ--IFFFCSIASMILGALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCG-TIEGIQSLLIGIFIYALMTIDAFA-IVLALRQTRVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAPVGVVTSVI 602 + W PD+YEGSPTPV AFLS+ K++ SA+ +R+F Y ++ + + +I SMILG L A+ QT +KR+LA+SSIG +GY+ G G + +G S++ + Y M + AFA IVL +T I D L +P A++ ++ + S G+PPLAGF K YLF+ G YFL +G++TSV+ Sbjct: 250 HQWTPDVYEGSPTPVVAFLSVTSKVAASASATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYMLFYISMNLGAFACIVLFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLYLFWCGWQAGLYFLVFIGLLTSVV 442 The following BLAST results are available for this feature:
BLAST of CX046849 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX046849 ID=CX046849; Name=CX046849; organism=Citrus sinensis; type=EST; length=652bpback to top |