CN186680

Overview
NameCN186680
Unique NameCN186680
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length580
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186680 vs. ExPASy Swiss-Prot
Match: HSP7C_ICTPU (Heat shock cognate 71 kDa protein OS=Ictalurus punctatus GN=hsc70 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.156e-19
Identity = 42/88 (47.73%), Postives = 62/88 (70.45%), Query Frame = -3
Query:  309 KEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPG 572
            ++K+ A+N LE+Y +NMK+ + D +KL  K+  ++K KI     E + WLD NQ+AEK++YE + K++E VCNPIIT +YQ  GG PG
Sbjct:  533 RDKVSAKNGLESYAFNMKSTVED-EKLKGKISDEDKHKILDKCNEVISWLDKNQTAEKDEYEHQQKDLEKVCNPIITKLYQSDGGMPG 619          
BLAST of CN186680 vs. ExPASy Swiss-Prot
Match: HSP7C_DANRE (Heat shock cognate 71 kDa protein OS=Danio rerio GN=hspa8 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.156e-19
Identity = 43/92 (46.74%), Postives = 64/92 (69.57%), Query Frame = -3
Query:  297 KEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGAGTE 572
            ++K+ A+N LE+Y +NMK+ + D +KL  K+  ++K KI     E + WLD NQ+AE+E++E + KE+E VCNPIIT +YQ +GG PG   E
Sbjct:  533 RDKVSAKNGLESYAFNMKSTVED-EKLKGKISDEDKQKILDKCNEVIGWLDKNQTAEREEFEHQQKELEKVCNPIITKLYQSAGGMPGGMPE 623          
BLAST of CN186680 vs. ExPASy Swiss-Prot
Match: HSP70_CHLRE (Heat shock 70 kDa protein OS=Chlamydomonas reinhardtii GN=HSP70 PE=2 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 1.156e-19
Identity = 45/92 (48.91%), Postives = 67/92 (72.83%), Query Frame = -3
Query:  303 EKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQ---RSGGAPGAG 569
            +K++A+NSLE Y YNM+N I + DK+A +L + +K+ +E A+  A++WL+ NQ AE E++E  LKE+E +CNPIIT +YQ    +GG PG G
Sbjct:  539 KKVEAKNSLENYAYNMRNTIRE-DKVASQLSASDKESMEKALTAAMDWLEANQMAEVEEFEHHLKELEGLCNPIITRLYQGGAGAGGMPGGG 629          
BLAST of CN186680 vs. ExPASy Swiss-Prot
Match: HSP70_BLAEM (Heat shock 70 kDa protein OS=Blastocladiella emersonii GN=HSP70 PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.509e-19
Identity = 41/86 (47.67%), Postives = 62/86 (72.09%), Query Frame = -3
Query:  309 KIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPG 566
            +I A+N LE+Y YN++N +ND DK+A K+++ +K+ +  A+ E + WLD NQ   K++YE K KE+E V NPI+T +Y  +GGAPG
Sbjct:  538 RIQAKNGLESYAYNLRNTLND-DKVAGKMDAADKETLNKAIDETISWLDGNQEGAKDEYEHKQKELEGVANPIMTKLYSAAGGAPG 622          
BLAST of CN186680 vs. ExPASy Swiss-Prot
Match: HSP7A_CAEEL (Heat shock 70 kDa protein A OS=Caenorhabditis elegans GN=hsp-1 PE=1 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 2.575e-19
Identity = 43/87 (49.43%), Postives = 64/87 (73.56%), Query Frame = -3
Query:  312 KEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAP 572
            K++I A+N LE+Y +N+K  I D +KL DK+  ++K KIE    E L+WLD NQ+AEKE++E + K++E + NPII+ +YQ +GGAP
Sbjct:  534 KDRIGAKNGLESYAFNLKQTIED-EKLKDKISPEDKKKIEDKCDEILKWLDSNQTAEKEEFEHQQKDLEGLANPIISKLYQSAGGAP 619          
BLAST of CN186680 vs. ExPASy Swiss-Prot
Match: HSP71_CANAL (Heat shock protein SSA1 OS=Candida albicans GN=SSA1 PE=1 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 2.575e-19
Identity = 42/90 (46.67%), Postives = 65/90 (72.22%), Query Frame = -3
Query:  309 KVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPG 578
            K   ++ A+N LE+Y Y++KN IND + + DK+ +D+K+K+  A+ E + WLD +Q+A  E+YE+K KE+E+V NPII+  Y  +GGAPG
Sbjct:  530 KEAARVQAKNQLESYAYSLKNTINDGE-MKDKIGADDKEKLTKAIDETISWLDASQAASTEEYEDKRKELESVANPIISGAYGAAGGAPG 618          
BLAST of CN186680 vs. ExPASy Swiss-Prot
Match: HSP7C_CAEEL (Heat shock 70 kDa protein C OS=Caenorhabditis elegans GN=hsp-3 PE=2 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 3.363e-19
Identity = 45/98 (45.92%), Postives = 67/98 (68.37%), Query Frame = -3
Query:  297 KVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGG----APGAGTE 578
            KVK+K +ARN LE+Y YN+KNQI DK+KL  KL+ D+K  IE AV+EA+ WL  N  A  E+ +E+ K++E+   PI++ +Y+ +G     AP  G++
Sbjct:  559 KVKDKAEARNELESYAYNLKNQIEDKEKLGGKLDEDDKKTIEEAVEEAISWLGSNAEASAEELKEQKKDLESKVQPIVSKLYKDAGAGGEEAPEEGSD 656          
BLAST of CN186680 vs. ExPASy Swiss-Prot
Match: HSP7C_CAEBR (Heat shock 70 kDa protein C OS=Caenorhabditis briggsae GN=hsp-3 PE=3 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 3.363e-19
Identity = 46/90 (51.11%), Postives = 62/90 (68.89%), Query Frame = -3
Query:  309 KVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPG 578
            KVKEK +ARN LE+Y Y++KNQI DK+KL  KL+ D+K  IE AV EA+ WL  N  A  E+ +E+ KE+E    PI++ +Y + GGA G
Sbjct:  559 KVKEKAEARNELESYAYSLKNQIGDKEKLGGKLDEDDKKTIEEAVDEAISWLGSNADASAEELKEQKKELEGKVQPIVSKLY-KDGGAGG 647          
BLAST of CN186680 vs. ExPASy Swiss-Prot
Match: HSP74_TRYBB (Heat shock 70 kDa protein 4 OS=Trypanosoma brucei brucei PE=2 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 7.491e-19
Identity = 44/87 (50.57%), Postives = 61/87 (70.11%), Query Frame = -3
Query:  303 IDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGAG 563
            IDA+N LE Y ++MKN IND + +A KL+  +K+ + TAV+EAL WL+DNQ A  E+Y  + KE+E VC PI++ +YQ  GG  G G
Sbjct:  539 IDAKNGLENYAFSMKNTINDPN-VAGKLDDADKNAVTTAVEEALRWLNDNQEASLEEYNHRQKELEGVCAPILSKMYQGMGGGDGPG 624          
BLAST of CN186680 vs. ExPASy Swiss-Prot
Match: HSP70_THEPA (Heat shock 70 kDa protein OS=Theileria parva GN=TP02_0148 PE=2 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 7.491e-19
Identity = 43/94 (45.74%), Postives = 69/94 (73.40%), Query Frame = -3
Query:  297 KVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGAGTE 578
            K ++ +++++ LE Y Y+MKN +++ D++  KL +DE D     + EAL+W++ NQ AE +++E+KLK VE VCNP++T +YQ SGGAPGAG +
Sbjct:  532 KRRKCVESKHKLENYCYSMKNTLSE-DQVKQKLGADEVDNALNTITEALKWVETNQLAEHDEFEDKLKHVEGVCNPLVTKLYQ-SGGAPGAGPD 623          
The following BLAST results are available for this feature:
BLAST of CN186680 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 162
Match NameE-valueIdentityDescription
HSP7C_ICTPU1.156e-1947.73Heat shock cognate 71 kDa protein OS=Ictalurus pun... [more]
HSP7C_DANRE1.156e-1946.74Heat shock cognate 71 kDa protein OS=Danio rerio G... [more]
HSP70_CHLRE1.156e-1948.91Heat shock 70 kDa protein OS=Chlamydomonas reinhar... [more]
HSP70_BLAEM1.509e-1947.67Heat shock 70 kDa protein OS=Blastocladiella emers... [more]
HSP7A_CAEEL2.575e-1949.43Heat shock 70 kDa protein A OS=Caenorhabditis eleg... [more]
HSP71_CANAL2.575e-1946.67Heat shock protein SSA1 OS=Candida albicans GN=SSA... [more]
HSP7C_CAEEL3.363e-1945.92Heat shock 70 kDa protein C OS=Caenorhabditis eleg... [more]
HSP7C_CAEBR3.363e-1951.11Heat shock 70 kDa protein C OS=Caenorhabditis brig... [more]
HSP74_TRYBB7.491e-1950.57Heat shock 70 kDa protein 4 OS=Trypanosoma brucei ... [more]
HSP70_THEPA7.491e-1945.74Heat shock 70 kDa protein OS=Theileria parva GN=TP... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0003E13_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0003E13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186680 ID=CN186680; Name=CN186680; organism=Citrus sinensis; type=EST; length=580bp
TTTTTTTTTTTTTTTTTTTTTTTTTTGAAGAACGTTCATTAGTATTGAAG
GAAACACTAGTAATGAAATAAGAAAAGATCCTTTAAAGTATCTTCACATC
CAAAAAAACACGCGAAGAAAGGGAAATTCCGCCTCCCTTTTACTTCTCCT
ACCACGAGAAAAATTACAGTAAGTACCCTCAGATAATCTAAAAAGCCTAT
TTTACTCAATTTTAGCCTCTTGACAGTTTTGGCAATATGGTCAATCGAAG
TAAAAATTCTTTAGAGCTCATCGTGTGAATCATCATCATCCGATGATTCA
GTGCCAGCACCGGGGGCTCCGCCAGATCTCTGATATACAGCAGTGATGAT
GGGGTTGCAAACGGCTTCAACCTCCTTGAGCTTCTCTTCATAGTCCTCTT
TCTCTGCGCTCTGGTTGTCATCGAGCCATTCAAGGGCTTCCTTTACAGCA
GTTTCAATCTTGTCCTTCTCATCAGATTCGAGCTTGTCGGCAAGCTTGTC
CTTGTCATTAATCTGGTTTTTCATGTTATAGACATAGGTCTCAAGGCTGT
TGCGAGCATCGATCTTCTCCTTTACTTTCT
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