CN186680

Overview
NameCN186680
Unique NameCN186680
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length580
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186680 vs. ExPASy Swiss-Prot
Match: HSP70_LEIBR (Heat shock 70 kDa protein (Fragment) OS=Leishmania braziliensis GN=HSP70 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.856e-18
Identity = 39/88 (44.32%), Postives = 61/88 (69.32%), Query Frame = -3
Query:  309 KEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPG 572
            ++ ++A+N LE Y Y+MKN ++D + ++ KLE  ++  +  A+  ALEWL+ NQ A KE+YE + KE+E+ CNPI+T +YQ  GG  G
Sbjct:  110 RDALEAKNGLENYAYSMKNTVSDTN-VSGKLEESDRSALNLAIDTALEWLNSNQEASKEEYEHRQKELESTCNPIMTKMYQSMGGGAG 196          
BLAST of CN186680 vs. ExPASy Swiss-Prot
Match: HSP72_HUMAN (Heat shock-related 70 kDa protein 2 OS=Homo sapiens GN=HSPA2 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 6.342e-18
Identity = 42/91 (46.15%), Postives = 63/91 (69.23%), Query Frame = -3
Query:  300 KEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGAGT 572
            ++++ A+N+LE+Y YN+K  + D +KL  K+   +K+KI    +E + WLD NQ AEK++YE K KE+E VCNPII+ +YQ   G PG G+
Sbjct:  536 RDRVAAKNALESYTYNIKQTVED-EKLRGKISEQDKNKILDKCQEVINWLDRNQMAEKDEYEHKQKELERVCNPIISKLYQ---GGPGGGS 622          
BLAST of CN186680 vs. ExPASy Swiss-Prot
Match: HSP70_LEIDO (Heat shock 70 kDa protein OS=Leishmania donovani GN=HSP70 PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 6.342e-18
Identity = 40/88 (45.45%), Postives = 60/88 (68.18%), Query Frame = -3
Query:  309 KEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPG 572
            +++++A+N LE Y Y+MKN + D + ++ KL+  +K  +   +   LEWL  NQ A KE+YE K KE+E+VCNPI+T +YQ  GGA G
Sbjct:  535 RDRVEAKNGLENYAYSMKNTLGDSN-VSGKLDDSDKATLNKEIDVTLEWLSSNQEATKEEYEHKQKELESVCNPIMTKMYQSMGGAGG 621          
BLAST of CN186680 vs. ExPASy Swiss-Prot
Match: HSP70_LEIAM (Heat shock 70 kDa protein OS=Leishmania amazonensis GN=HSP70 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 6.342e-18
Identity = 40/87 (45.98%), Postives = 59/87 (67.82%), Query Frame = -3
Query:  309 EKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPG 569
            ++++A+N LE Y Y+MKN + D + ++ KL+  +K  +   ++ ALEWL  NQ A KE+YE K KE+E VCNPI+T +YQ  GG  G
Sbjct:  537 DRVEAKNGLENYAYSMKNTLGDSN-VSGKLDDTDKSTLNKEIEAALEWLSSNQEATKEEYEHKQKELENVCNPIMTKMYQSMGGGAG 622          
BLAST of CN186680 vs. ExPASy Swiss-Prot
Match: HSP70_PYRSA (Heat shock 70 kDa protein OS=Pyrenomonas salina GN=HSP70 PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.413e-17
Identity = 42/92 (45.65%), Postives = 66/92 (71.74%), Query Frame = -3
Query:  303 KVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGAG 578
            K+ +K++A+NSLE Y YN++N + D +KL +K++ ++K  IE  VKE LE+++ N+  EKE+YEEK KE++   NPII+ +YQ+ G  P  G
Sbjct:  537 KLDKKLEAKNSLENYAYNIRNTVRD-EKLKEKIQEEDKKSIEEKVKEVLEFIETNEDLEKEEYEEKEKELKNFANPIISKLYQQ-GSVPDMG 626          
BLAST of CN186680 vs. ExPASy Swiss-Prot
Match: HSP72_RAT (Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus GN=Hspa2 PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 1.845e-17
Identity = 41/90 (45.56%), Postives = 62/90 (68.89%), Query Frame = -3
Query:  303 KEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGAG 572
            ++++ A+N++E+Y YN+K  + D +KL  K+   +K+KI    +E + WLD NQ AEK++YE K KE+E VCNPII+ +YQ   G PG G
Sbjct:  536 RDRVAAKNAVESYTYNIKQTVED-EKLRGKISEQDKNKILDKCQEVINWLDRNQMAEKDEYEHKQKELERVCNPIISKLYQ---GGPGGG 621          
BLAST of CN186680 vs. ExPASy Swiss-Prot
Match: HSP72_MOUSE (Heat shock-related 70 kDa protein 2 OS=Mus musculus GN=Hspa2 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.845e-17
Identity = 41/90 (45.56%), Postives = 62/90 (68.89%), Query Frame = -3
Query:  303 KEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGAG 572
            ++++ A+N++E+Y YN+K  + D +KL  K+   +K+KI    +E + WLD NQ AEK++YE K KE+E VCNPII+ +YQ   G PG G
Sbjct:  536 RDRVAAKNAVESYTYNIKQTVED-EKLRGKISEQDKNKILDKCQEVINWLDRNQMAEKDEYEHKQKELERVCNPIISKLYQ---GGPGGG 621          
BLAST of CN186680 vs. ExPASy Swiss-Prot
Match: HSP72_CAPHI (Heat shock-related 70 kDa protein 2 OS=Capra hircus GN=HSPA2 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.845e-17
Identity = 41/90 (45.56%), Postives = 62/90 (68.89%), Query Frame = -3
Query:  303 KEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGAG 572
            ++++ A+N++E+Y YN+K  + D +KL  K+   +K+KI    +E + WLD NQ AEK++YE K KE+E VCNPII+ +YQ   G PG G
Sbjct:  536 RDRVAAKNAVESYTYNIKQTVED-EKLRGKISDQDKNKILDKCQEVINWLDRNQMAEKDEYEHKQKELERVCNPIISKLYQ---GGPGGG 621          
BLAST of CN186680 vs. ExPASy Swiss-Prot
Match: HSP72_BOVIN (Heat shock-related 70 kDa protein 2 OS=Bos taurus GN=HSPA2 PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 1.845e-17
Identity = 41/90 (45.56%), Postives = 62/90 (68.89%), Query Frame = -3
Query:  303 KEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGAG 572
            ++++ A+N++E+Y YN+K  + D +KL  K+   +K+KI    +E + WLD NQ AEK++YE K KE+E VCNPII+ +YQ   G PG G
Sbjct:  536 RDRVAAKNAVESYTYNIKQTVED-EKLRGKISDQDKNKILDKCQEVINWLDRNQMAEKDEYEHKQKELERVCNPIISKLYQ---GGPGGG 621          
BLAST of CN186680 vs. ExPASy Swiss-Prot
Match: HSP71_PARBA (Heat shock 70 kDa protein 1 OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=HSP70-1 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.845e-17
Identity = 40/88 (45.45%), Postives = 67/88 (76.14%), Query Frame = -3
Query:  303 KIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGAG 566
            +I A+N LE+Y Y+++N I+D  K+ +KL++ +K+K++T + + + WLD+NQ+A KE++E + KE+E+V NPI+   Y  +GGAPGAG
Sbjct:  532 RISAKNGLESYAYSLRNTISDS-KVDEKLDASDKEKLKTEIDKTVSWLDENQTATKEEFEAQQKELESVANPIMMKFY-GAGGAPGAG 617          
The following BLAST results are available for this feature:
BLAST of CN186680 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 162
Match NameE-valueIdentityDescription
HSP70_LEIBR4.856e-1844.32Heat shock 70 kDa protein (Fragment) OS=Leishmania... [more]
HSP72_HUMAN6.342e-1846.15Heat shock-related 70 kDa protein 2 OS=Homo sapien... [more]
HSP70_LEIDO6.342e-1845.45Heat shock 70 kDa protein OS=Leishmania donovani G... [more]
HSP70_LEIAM6.342e-1845.98Heat shock 70 kDa protein OS=Leishmania amazonensi... [more]
HSP70_PYRSA1.413e-1745.65Heat shock 70 kDa protein OS=Pyrenomonas salina GN... [more]
HSP72_RAT1.845e-1745.56Heat shock-related 70 kDa protein 2 OS=Rattus norv... [more]
HSP72_MOUSE1.845e-1745.56Heat shock-related 70 kDa protein 2 OS=Mus musculu... [more]
HSP72_CAPHI1.845e-1745.56Heat shock-related 70 kDa protein 2 OS=Capra hircu... [more]
HSP72_BOVIN1.845e-1745.56Heat shock-related 70 kDa protein 2 OS=Bos taurus ... [more]
HSP71_PARBA1.845e-1745.45Heat shock 70 kDa protein 1 OS=Paracoccidioides br... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0003E13_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0003E13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186680 ID=CN186680; Name=CN186680; organism=Citrus sinensis; type=EST; length=580bp
TTTTTTTTTTTTTTTTTTTTTTTTTTGAAGAACGTTCATTAGTATTGAAG
GAAACACTAGTAATGAAATAAGAAAAGATCCTTTAAAGTATCTTCACATC
CAAAAAAACACGCGAAGAAAGGGAAATTCCGCCTCCCTTTTACTTCTCCT
ACCACGAGAAAAATTACAGTAAGTACCCTCAGATAATCTAAAAAGCCTAT
TTTACTCAATTTTAGCCTCTTGACAGTTTTGGCAATATGGTCAATCGAAG
TAAAAATTCTTTAGAGCTCATCGTGTGAATCATCATCATCCGATGATTCA
GTGCCAGCACCGGGGGCTCCGCCAGATCTCTGATATACAGCAGTGATGAT
GGGGTTGCAAACGGCTTCAACCTCCTTGAGCTTCTCTTCATAGTCCTCTT
TCTCTGCGCTCTGGTTGTCATCGAGCCATTCAAGGGCTTCCTTTACAGCA
GTTTCAATCTTGTCCTTCTCATCAGATTCGAGCTTGTCGGCAAGCTTGTC
CTTGTCATTAATCTGGTTTTTCATGTTATAGACATAGGTCTCAAGGCTGT
TGCGAGCATCGATCTTCTCCTTTACTTTCT
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