CN186680

Overview
NameCN186680
Unique NameCN186680
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length580
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186680 vs. ExPASy Swiss-Prot
Match: HS71B_BOVIN (Heat shock 70 kDa protein 1B OS=Bos taurus GN=HSPA1B PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 4.110e-17
Identity = 41/90 (45.56%), Postives = 63/90 (70.00%), Query Frame = -3
Query:  303 KEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGAG 572
            +E++ A+N+LE+Y +NMK+ + D+  L  K+   +K K+    +E + WLD N  AEK+++E K KE+E VCNPII+ +YQ +GG PGAG
Sbjct:  533 RERVSAKNALESYAFNMKSAVEDEG-LKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISRLYQGAGG-PGAG 620          
BLAST of CN186680 vs. ExPASy Swiss-Prot
Match: HS71B_BOSMU (Heat shock 70 kDa protein 1B OS=Bos mutus grunniens GN=HSPA1B PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 4.110e-17
Identity = 41/90 (45.56%), Postives = 63/90 (70.00%), Query Frame = -3
Query:  303 KEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGAG 572
            +E++ A+N+LE+Y +NMK+ + D+  L  K+   +K K+    +E + WLD N  AEK+++E K KE+E VCNPII+ +YQ +GG PGAG
Sbjct:  533 RERVSAKNALESYAFNMKSAVEDEG-LKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISRLYQGAGG-PGAG 620          
BLAST of CN186680 vs. ExPASy Swiss-Prot
Match: HS71A_BOVIN (Heat shock 70 kDa protein 1A OS=Bos taurus GN=HSPA1A PE=2 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 4.110e-17
Identity = 41/90 (45.56%), Postives = 63/90 (70.00%), Query Frame = -3
Query:  303 KEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGAG 572
            +E++ A+N+LE+Y +NMK+ + D+  L  K+   +K K+    +E + WLD N  AEK+++E K KE+E VCNPII+ +YQ +GG PGAG
Sbjct:  533 RERVSAKNALESYAFNMKSAVEDEG-LKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISRLYQGAGG-PGAG 620          
BLAST of CN186680 vs. ExPASy Swiss-Prot
Match: MAG29_DERFA (Allergen MAG29 (Fragment) OS=Dermatophagoides farinae GN=MAG29 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 5.368e-17
Identity = 43/92 (46.74%), Postives = 66/92 (71.74%), Query Frame = -3
Query:  303 KVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGAG 578
            K +++I A+NSLE Y + MK  + D++ +  K+  +++ KI   V E L+WLD N  AEK+++E + KE+E+VCNPIIT +YQ++GGA GAG
Sbjct:   20 KQRDRIAAKNSLEGYAFQMKATL-DEEAIKSKVSEEDRKKILDKVDEVLKWLDANALAEKDEFEHQRKELESVCNPIITKLYQQAGGA-GAG 109          
BLAST of CN186680 vs. ExPASy Swiss-Prot
Match: HSP70_PENCI (Heat shock 70 kDa protein (Fragment) OS=Penicillium citrinum GN=HSP70 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 5.368e-17
Identity = 41/85 (48.24%), Postives = 61/85 (71.76%), Query Frame = -3
Query:  312 KIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAP 566
            +I A+N LE+Y Y++KN I +  KL  ++  D+K KIE  + E + WLD+NQ+AEK++YE + KE+EA+ NPI+ A Y  +GGAP
Sbjct:  403 RIQAKNGLESYAYSLKNTITE-GKL--QMSDDDKKKIEDKISEIISWLDNNQTAEKDEYESQQKELEAIANPIMQAAYGAAGGAP 484          
BLAST of CN186680 vs. ExPASy Swiss-Prot
Match: HS71L_PIG (Heat shock 70 kDa protein 1-like OS=Sus scrofa GN=HSPA1L PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 5.368e-17
Identity = 42/91 (46.15%), Postives = 61/91 (67.03%), Query Frame = -3
Query:  300 KEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGAGT 572
            +EKI A+N+LE+Y +NMK+ ++D+  L  K+   +K KI     EAL WL+ NQ AEK++++ K +E+E VCNPIIT +YQ     P  GT
Sbjct:  535 REKIAAKNALESYAFNMKSAVSDEG-LKGKISDADKKKILNKCNEALSWLEANQLAEKDEFDHKRRELEQVCNPIITKLYQGGCTGPSCGT 624          
BLAST of CN186680 vs. ExPASy Swiss-Prot
Match: HS71L_BOVIN (Heat shock 70 kDa protein 1-like OS=Bos taurus GN=HSPA1L PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 7.011e-17
Identity = 42/91 (46.15%), Postives = 61/91 (67.03%), Query Frame = -3
Query:  300 KEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGAGT 572
            +EKI A+N+LE+Y +NMK+ ++D+  L  K+   +K KI +   E L WL+ NQ AEK++++ K KE+E VCNPIIT +YQ     P  GT
Sbjct:  535 REKIAAKNALESYAFNMKSAVSDEG-LQGKISESDKKKILSKCNEVLLWLEANQLAEKDEFDHKRKELEQVCNPIITKLYQGGCTGPSCGT 624          
BLAST of CN186680 vs. ExPASy Swiss-Prot
Match: HSP70_PLEWA (Heat shock 70 kDa protein OS=Pleurodeles waltlii GN=HSP70 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 9.157e-17
Identity = 40/88 (45.45%), Postives = 61/88 (69.32%), Query Frame = -3
Query:  309 KEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPG 572
            +EK+ A+N+LE+  +NMK+ + + D L DK+  D++ KI     + + W+++NQ AEKE+YE + KE+E VCN IIT +YQ  GG PG
Sbjct:  535 REKVSAKNTLESIAFNMKSTV-EGDNLKDKISEDDRKKIVDKCNQTISWMENNQMAEKEEYEHQQKELEKVCNSIITKLYQ--GGMPG 619          
BLAST of CN186680 vs. ExPASy Swiss-Prot
Match: HSP70_PLACB (Heat shock 70 kDa protein OS=Plasmodium cynomolgi (strain Berok) PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 9.157e-17
Identity = 41/88 (46.59%), Postives = 60/88 (68.18%), Query Frame = -3
Query:  309 KEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPG 572
            K++I+ARNSLE Y Y +K+ + D+ K+ +KL+  E +    ++   LEWL+ NQ A KE+YE K KE E+VC PI++ +YQ  GGA G
Sbjct:  546 KKRIEARNSLENYCYGVKSSLEDQ-KIKEKLQPSEIETCMKSITTILEWLEKNQLASKEEYESKQKEAESVCAPIMSKIYQDVGGAAG 632          
BLAST of CN186680 vs. ExPASy Swiss-Prot
Match: HSP71_PONAB (Heat shock 70 kDa protein 1 OS=Pongo abelii GN=HSPA1 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.196e-16
Identity = 40/90 (44.44%), Postives = 62/90 (68.89%), Query Frame = -3
Query:  303 KEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGAG 572
            +E++ A+N+LE+Y +NMK+ + D+  L  K+   +K K+    +E + WLD N  AEK+++E K KE+E VCNPII+ +YQ +GG PG G
Sbjct:  533 RERVSAKNALESYAFNMKSAVEDEG-LKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISGLYQGAGG-PGPG 620          
The following BLAST results are available for this feature:
BLAST of CN186680 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 162
Match NameE-valueIdentityDescription
HS71B_BOVIN4.110e-1745.56Heat shock 70 kDa protein 1B OS=Bos taurus GN=HSPA... [more]
HS71B_BOSMU4.110e-1745.56Heat shock 70 kDa protein 1B OS=Bos mutus grunnien... [more]
HS71A_BOVIN4.110e-1745.56Heat shock 70 kDa protein 1A OS=Bos taurus GN=HSPA... [more]
MAG29_DERFA5.368e-1746.74Allergen MAG29 (Fragment) OS=Dermatophagoides fari... [more]
HSP70_PENCI5.368e-1748.24Heat shock 70 kDa protein (Fragment) OS=Penicilliu... [more]
HS71L_PIG5.368e-1746.15Heat shock 70 kDa protein 1-like OS=Sus scrofa GN=... [more]
HS71L_BOVIN7.011e-1746.15Heat shock 70 kDa protein 1-like OS=Bos taurus GN=... [more]
HSP70_PLEWA9.157e-1745.45Heat shock 70 kDa protein OS=Pleurodeles waltlii G... [more]
HSP70_PLACB9.157e-1746.59Heat shock 70 kDa protein OS=Plasmodium cynomolgi ... [more]
HSP71_PONAB1.196e-1644.44Heat shock 70 kDa protein 1 OS=Pongo abelii GN=HSP... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0003E13_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0003E13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186680 ID=CN186680; Name=CN186680; organism=Citrus sinensis; type=EST; length=580bp
TTTTTTTTTTTTTTTTTTTTTTTTTTGAAGAACGTTCATTAGTATTGAAG
GAAACACTAGTAATGAAATAAGAAAAGATCCTTTAAAGTATCTTCACATC
CAAAAAAACACGCGAAGAAAGGGAAATTCCGCCTCCCTTTTACTTCTCCT
ACCACGAGAAAAATTACAGTAAGTACCCTCAGATAATCTAAAAAGCCTAT
TTTACTCAATTTTAGCCTCTTGACAGTTTTGGCAATATGGTCAATCGAAG
TAAAAATTCTTTAGAGCTCATCGTGTGAATCATCATCATCCGATGATTCA
GTGCCAGCACCGGGGGCTCCGCCAGATCTCTGATATACAGCAGTGATGAT
GGGGTTGCAAACGGCTTCAACCTCCTTGAGCTTCTCTTCATAGTCCTCTT
TCTCTGCGCTCTGGTTGTCATCGAGCCATTCAAGGGCTTCCTTTACAGCA
GTTTCAATCTTGTCCTTCTCATCAGATTCGAGCTTGTCGGCAAGCTTGTC
CTTGTCATTAATCTGGTTTTTCATGTTATAGACATAGGTCTCAAGGCTGT
TGCGAGCATCGATCTTCTCCTTTACTTTCT
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