CN186652
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186652 vs. ExPASy Swiss-Prot
Match: RL7A_BOVIN (60S ribosomal protein L7a OS=Bos taurus GN=RPL7A PE=2 SV=3) HSP 1 Score: 93.5893 bits (231), Expect = 9.670e-19 Identity = 48/91 (52.75%), Postives = 59/91 (64.84%), Query Frame = 2 Query: 383 RGGKVAAAPA---KNKPEKVVNPLFEKRPKQFGIGGALPPKKDLHRYVKWPKAXXXXXXXXXXXXXXKVPPALNQFTKTLDKNLASSLFKL 646 +G KVA APA K + +KVVNPLFEKRPK FGIG + PK+DL R+VKWP+ KVPPA+NQFT+ LD+ A+ L KL Sbjct: 8 KGKKVAPAPAVVKKQEAKKVVNPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKL 98
BLAST of CN186652 vs. ExPASy Swiss-Prot
Match: RL7A_ICTPU (60S ribosomal protein L7a OS=Ictalurus punctatus GN=rpl7a PE=2 SV=3) HSP 1 Score: 92.8189 bits (229), Expect = 1.650e-18 Identity = 47/91 (51.65%), Postives = 60/91 (65.93%), Query Frame = 2 Query: 383 RGGKVAAAPA---KNKPEKVVNPLFEKRPKQFGIGGALPPKKDLHRYVKWPKAXXXXXXXXXXXXXXKVPPALNQFTKTLDKNLASSLFKL 646 +G KVA AP+ K++ +KVVNPLFEKRPK FGIG + PK+DL R+VKWP+ KVPPA+NQF + LD+ A+ LFKL Sbjct: 8 KGKKVAPAPSVAKKHEVKKVVNPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYVRLQRHGSILYKRLKVPPAINQFNQALDRQTATQLFKL 98
BLAST of CN186652 vs. ExPASy Swiss-Prot
Match: RL7A_CHICK (60S ribosomal protein L7a OS=Gallus gallus GN=RPL7A PE=2 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 2.814e-18 Identity = 47/91 (51.65%), Postives = 59/91 (64.84%), Query Frame = 2 Query: 383 RGGKVAAAPA---KNKPEKVVNPLFEKRPKQFGIGGALPPKKDLHRYVKWPKAXXXXXXXXXXXXXXKVPPALNQFTKTLDKNLASSLFKL 646 +G KVA APA K + +KVVNPLFEKRPK FGIG + PK+DL R+VKWP+ KVPPA+NQF++ LD+ A+ L KL Sbjct: 8 KGKKVAPAPAVVKKQEAKKVVNPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRSILYKRLKVPPAINQFSQALDRQTATQLLKL 98
BLAST of CN186652 vs. ExPASy Swiss-Prot
Match: MSRA_BRANA (Peptide methionine sulfoxide reductase OS=Brassica napus GN=PMSR PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 3.710e-18 Identity = 44/65 (67.69%), Postives = 52/65 (80.00%), Query Frame = -1 Query: 142 RLARESMEAKQLEMKDQRKIVTEILPAKRFYRAEEYHQQYLEKGGGRGSKQSAEKGCDEPVRCYG 336 +LARE+ME +Q + RKIVTEILPA +FYRAE YHQQYL KGG G QSAEKGC++P+RCYG Sbjct: 195 KLAREAMEKQQKILN--RKIVTEILPATKFYRAENYHQQYLAKGGRMGLSQSAEKGCNDPIRCYG 257
BLAST of CN186652 vs. ExPASy Swiss-Prot
Match: MSRA_ARATH (Peptide methionine sulfoxide reductase OS=Arabidopsis thaliana GN=PMSR PE=1 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 4.102e-17 Identity = 41/65 (63.08%), Postives = 52/65 (80.00%), Query Frame = -1 Query: 142 RLARESMEAKQLEMKDQRKIVTEILPAKRFYRAEEYHQQYLEKGGGRGSKQSAEKGCDEPVRCYG 336 R+ARE++E +Q + ++IVTEILPA +FYRAE YHQQYL KGG G +QSAEKGC +P+RCYG Sbjct: 196 RIAREAVEKQQKILN--KRIVTEILPATKFYRAENYHQQYLAKGGRMGLRQSAEKGCKDPIRCYG 258
BLAST of CN186652 vs. ExPASy Swiss-Prot
Match: MSRA_LACSA (Peptide methionine sulfoxide reductase OS=Lactuca sativa PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 6.996e-17 Identity = 40/63 (63.49%), Postives = 50/63 (79.37%), Query Frame = -1 Query: 142 RESMEAKQLEMKD-QRKIVTEILPAKRFYRAEEYHQQYLEKGGGRGSKQSAEKGCDEPVRCYG 327 + ++EAK+ K R +VTEILPAK+FYRAEEYHQQYL KGG G +QS EKGC++P+RCYG Sbjct: 197 KAAIEAKERHQKKLNRTVVTEILPAKKFYRAEEYHQQYLAKGGRFGFRQSTEKGCNDPIRCYG 259
BLAST of CN186652 vs. ExPASy Swiss-Prot
Match: RL7A_DROME (60S ribosomal protein L7a OS=Drosophila melanogaster GN=RpL7A PE=2 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 1.544e-16 Identity = 48/89 (53.93%), Postives = 57/89 (64.04%), Query Frame = 2 Query: 392 KVAAAP-AKNKP--EKVVNPLFEKRPKQFGIGGALPPKKDLHRYVKWPKAXXXXXXXXXXXXXXKVPPALNQFTKTLDKNLASSLFKLL 649 KVA AP A KP +KVVN LFEKRPK FGIG + PK+DL R+V+WPK KVPP ++QF++TLDK A LFKLL Sbjct: 16 KVAPAPLAVKKPVVKKVVNQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLDKTTAVKLFKLL 104
BLAST of CN186652 vs. ExPASy Swiss-Prot
Match: RL7A_ANOGA (60S ribosomal protein L7a OS=Anopheles gambiae GN=RpL7A PE=3 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 5.867e-16 Identity = 46/100 (46.00%), Postives = 61/100 (61.00%), Query Frame = 2 Query: 362 RHEMAPKRGGKVAAAPA----KNKPEKVVNPLFEKRPKQFGIGGALPPKKDLHRYVKWPKAXXXXXXXXXXXXXXKVPPALNQFTKTLDKNLASSLFKLL 649 + ++ PK+ KVA AP K + +KVVNPLFEKR K +GIG + PK+DL R+VKWPK K+PP +NQFT+TLDK A + K+L Sbjct: 8 KKKVVPKQ--KVAPAPLAKPKKVEVKKVVNPLFEKRVKNYGIGQNVQPKRDLSRFVKWPKYIRIQRHRAILQKRLKIPPPINQFTQTLDKPTAQQVMKML 105
BLAST of CN186652 vs. ExPASy Swiss-Prot
Match: RL8_SCHPO (60S ribosomal protein L8 OS=Schizosaccharomyces pombe GN=rpl8 PE=1 SV=3) HSP 1 Score: 82.8037 bits (203), Expect = 1.707e-15 Identity = 48/95 (50.53%), Postives = 58/95 (61.05%), Query Frame = 2 Query: 371 MAPKRGGKVAAAP-AKNKPEKVV-NPLFEKRPKQFGIGGALPPKKDLHRYVKWPKAXXXXXXXXXXXXXXKVPPALNQFTKTLDKNLASSLFKLL 649 MAPK KVA +P A+ K K NPLF RP+ FGIG + PK+DL R+VKWP+ KVPPA+ QF KTLDKN A+ +FKLL Sbjct: 1 MAPK-SKKVAPSPFAQPKAAKTTKNPLFVSRPRSFGIGQDIQPKRDLSRFVKWPEYIRLQRRRKILNLRLKVPPAIAQFQKTLDKNTATQVFKLL 94
BLAST of CN186652 vs. ExPASy Swiss-Prot
Match: RL8B_YEAST (60S ribosomal protein L8-B OS=Saccharomyces cerevisiae GN=RPL8B PE=1 SV=3) HSP 1 Score: 76.2554 bits (186), Expect = 1.598e-13 Identity = 44/95 (46.32%), Postives = 51/95 (53.68%), Query Frame = 2 Query: 371 MAPKRGGKVAAAP---AKNKPEKVVNPLFEKRPKQFGIGGALPPKKDLHRYVKWPKAXXXXXXXXXXXXXXKVPPALNQFTKTLDKNLASSLFKL 646 MAP G KVA AP K K NPL PK FGIG A+ PK++L RYVKWP+ KVPP + QF TLD+N A+ FKL Sbjct: 1 MAP--GKKVAPAPFGAKSTKSNKAKNPLTHSTPKNFGIGQAVQPKRNLSRYVKWPEYVRLQRQKKILSIRLKVPPTIAQFQYTLDRNTAAETFKL 93 The following BLAST results are available for this feature:
BLAST of CN186652 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186652 ID=CN186652; Name=CN186652; organism=Citrus sinensis; type=EST; length=654bpback to top |