CN186651
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN186651 vs. ExPASy Swiss-Prot
Match: CLPP_BURCH (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia cenocepacia (strain HI2424) GN=clpP PE=3 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 9.493e-49 Identity = 91/136 (66.91%), Postives = 118/136 (86.76%), Query Frame = -2 Query: 379 PNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVIM 786 P+KDI +Y+NSPGGSV+AGMAI+DT++ I+PDVST+C+GLAASMGAFLL++G KGKR++LPNSR+MIHQPLGGA+G SDI++QA E+L+ K LN L+ HTGQ +E+I DTDRD FMS+E+AK YGLID V++ Sbjct: 79 PDKDISLYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLASGAKGKRFALPNSRVMIHQPLGGARGQASDIEIQAREILYLKERLNNLLAQHTGQDVERIARDTDRDNFMSSEDAKAYGLIDQVLL 214
BLAST of CN186651 vs. ExPASy Swiss-Prot
Match: CLPP_BURCA (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia cenocepacia (strain AU 1054) GN=clpP PE=3 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 9.493e-49 Identity = 91/136 (66.91%), Postives = 118/136 (86.76%), Query Frame = -2 Query: 379 PNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVIM 786 P+KDI +Y+NSPGGSV+AGMAI+DT++ I+PDVST+C+GLAASMGAFLL++G KGKR++LPNSR+MIHQPLGGA+G SDI++QA E+L+ K LN L+ HTGQ +E+I DTDRD FMS+E+AK YGLID V++ Sbjct: 79 PDKDISLYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLASGAKGKRFALPNSRVMIHQPLGGARGQASDIEIQAREILYLKERLNNLLAQHTGQDVERIARDTDRDNFMSSEDAKAYGLIDQVLL 214
BLAST of CN186651 vs. ExPASy Swiss-Prot
Match: CLPP_BURS3 (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia sp. (strain 383) GN=clpP PE=3 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 1.619e-48 Identity = 91/136 (66.91%), Postives = 118/136 (86.76%), Query Frame = -2 Query: 379 PNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVIM 786 P+KDI +Y+NSPGGSV+AGMAI+DT++ I+PDVST+C+GLAASMGAFLL++G KGKR++LPNSR+MIHQPLGGA+G SDI++QA E+L+ K LN L+ HTGQ +E+I DTDRD FMS+E+AK YGLID V++ Sbjct: 79 PDKDISLYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLASGAKGKRFALPNSRVMIHQPLGGARGQASDIEIQAREILYLKERLNQLLAQHTGQDVERIARDTDRDNFMSSEDAKAYGLIDQVLL 214
BLAST of CN186651 vs. ExPASy Swiss-Prot
Match: CLPP_THIDA (ATP-dependent Clp protease proteolytic subunit OS=Thiobacillus denitrificans (strain ATCC 25259) GN=clpP PE=3 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 2.115e-48 Identity = 91/135 (67.41%), Postives = 115/135 (85.19%), Query Frame = -2 Query: 382 PNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVI 786 P+KDI +Y+NSPGGSV+AG+AI+DT++ I+PDVST+C+G AASMGAFLL+AG KGKRY LPNSR+MIHQPLGG QG SDI++ A E+L+ KA LNG L+ HTGQ+LE I+ DTDRD FMSAE++ YGL+D V+ Sbjct: 70 PDKDIYLYINSPGGSVSAGLAIYDTMQFIKPDVSTLCIGQAASMGAFLLTAGAKGKRYCLPNSRVMIHQPLGGFQGQASDIEIHAKEILYLKARLNGMLAKHTGQSLEVIDRDTDRDNFMSAEDSVKYGLVDKVL 204
BLAST of CN186651 vs. ExPASy Swiss-Prot
Match: CLPP_BURVG (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=clpP PE=3 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 2.115e-48 Identity = 90/136 (66.18%), Postives = 118/136 (86.76%), Query Frame = -2 Query: 379 PNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVIM 786 P+KDI +Y+NSPGGSV+AGMAI+DT++ I+PDVST+C+GLAASMGAFLL++G KGKR++LPNSR+MIHQPLGGA+G SDI++QA E+L+ K LN L+ HTGQ +E+I DTDRD FMS+++AK YGLID V++ Sbjct: 79 PDKDISLYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLASGAKGKRFALPNSRVMIHQPLGGARGQASDIEIQAREILYLKERLNNLLAQHTGQDVERIARDTDRDNFMSSDDAKAYGLIDQVLL 214
BLAST of CN186651 vs. ExPASy Swiss-Prot
Match: CLPP_BURTA (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=clpP PE=3 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 2.762e-48 Identity = 90/134 (67.16%), Postives = 117/134 (87.31%), Query Frame = -2 Query: 385 PNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGV 786 P+KDI +Y+NSPGGSV+AGMAI+DT++ ++PDVST+C+GLAASMGAFLL++G KGKRY+LPN+R+MIHQPLGGA+G SDI++QA E+L+ K LN L++HTGQ +E+I DTDRD FMS+E+AK YGLID V Sbjct: 69 PDKDISLYINSPGGSVSAGMAIYDTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKRYALPNARVMIHQPLGGARGQASDIEIQAREILYLKDRLNHLLAHHTGQDVERIARDTDRDNFMSSEDAKAYGLIDHV 202
BLAST of CN186651 vs. ExPASy Swiss-Prot
Match: CLPP3_PROMT (ATP-dependent Clp protease proteolytic subunit 3 OS=Prochlorococcus marinus (strain NATL2A) GN=clpP3 PE=3 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 2.762e-48 Identity = 92/141 (65.25%), Postives = 115/141 (81.56%), Query Frame = -2 Query: 364 PNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVIMNPHKI 786 P KDI +Y+NSPGGSVTAG+AI+DT++ + PDV T+C GLAASMGAFLLS GTKGKR +LPNSRIMIHQPLGGAQG +I++QA E+L+ K LN L+ HTGQ ++KI+EDTDRD F+S +EA +YGLID V+ N + I Sbjct: 54 PEKDIQLYVNSPGGSVTAGLAIYDTMQQVSPDVITICYGLAASMGAFLLSGGTKGKRLALPNSRIMIHQPLGGAQGQAVEIEIQAKEILYLKETLNSLLAEHTGQNIQKISEDTDRDHFLSPQEAVEYGLIDKVVSNLNSI 194
BLAST of CN186651 vs. ExPASy Swiss-Prot
Match: CLPP1_SYNSC (ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus sp. (strain CC9605) GN=clpP1 PE=3 SV=2) HSP 1 Score: 192.2 bits (487), Expect = 2.762e-48 Identity = 91/135 (67.41%), Postives = 113/135 (83.70%), Query Frame = -2 Query: 382 PNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVI 786 P KDI +Y+NSPGGSVTAG+AI+DT++ + PDV T+C GLAASMGAFLLS GTKGKR +LPN+RIMIHQPLGGAQG DI++QA E+L+ K LNG ++ HTGQ L+KI+EDTDRD+F+S EA +YGLID V+ Sbjct: 61 PEKDIQIYINSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPNARIMIHQPLGGAQGQAVDIEIQAKEILYLKETLNGLMAEHTGQPLDKISEDTDRDYFLSPAEAVEYGLIDRVV 195
BLAST of CN186651 vs. ExPASy Swiss-Prot
Match: CLPP_NITSB (ATP-dependent Clp protease proteolytic subunit OS=Nitratiruptor sp. (strain SB155-2) GN=clpP PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 3.607e-48 Identity = 89/135 (65.93%), Postives = 119/135 (88.15%), Query Frame = -2 Query: 382 PNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVI 786 P+KDI +Y+NSPGG +T+GM+I+DT+ +I+PDVST+C+G AASMGAFLLS+GTKGKRY+LP++RIMIHQPLGGAQG +DI++QA E+L K LN L+ +TGQ+++KI +DT+RDFFMS+EEAK+YGLID V+ Sbjct: 57 PDKDIYLYINSPGGVITSGMSIYDTMNYIKPDVSTICIGQAASMGAFLLSSGTKGKRYALPHARIMIHQPLGGAQGQATDIEIQAKEILRLKKILNEILAENTGQSVKKIAKDTERDFFMSSEEAKEYGLIDQVL 191
BLAST of CN186651 vs. ExPASy Swiss-Prot
Match: CLPP3_PROMP (ATP-dependent Clp protease proteolytic subunit 3 OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=clpP3 PE=3 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 4.711e-48 Identity = 93/137 (67.88%), Postives = 113/137 (82.48%), Query Frame = -2 Query: 376 PNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVIMN 786 P+KDI +Y+NSPGGSVTAG+AI+DT++ I PDV T+C G+AASMGAFLLS G KGKR +LPNSRIMIHQPLGGAQG +I++QA E+L K LN L+ HT Q+LEKINEDT+RD+F+S EEA +YGLID VI N Sbjct: 77 PHKDIQIYINSPGGSVTAGLAIYDTMQQISPDVVTICFGVAASMGAFLLSGGAKGKRLALPNSRIMIHQPLGGAQGQAVEIEIQAKEILFLKKTLNSLLAKHTNQSLEKINEDTERDYFLSPEEAVEYGLIDKVIKN 213 The following BLAST results are available for this feature:
BLAST of CN186651 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN186651 ID=CN186651; Name=CN186651; organism=Citrus sinensis; type=EST; length=787bpback to top |