CN186651

Overview
NameCN186651
Unique NameCN186651
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length787
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9833 contig Csv1_Contig9833:504..1289. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186651 vs. ExPASy Swiss-Prot
Match: CLPP_BURCH (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia cenocepacia (strain HI2424) GN=clpP PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 9.493e-49
Identity = 91/136 (66.91%), Postives = 118/136 (86.76%), Query Frame = -2
Query:  379 PNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVIM 786
            P+KDI +Y+NSPGGSV+AGMAI+DT++ I+PDVST+C+GLAASMGAFLL++G KGKR++LPNSR+MIHQPLGGA+G  SDI++QA E+L+ K  LN  L+ HTGQ +E+I  DTDRD FMS+E+AK YGLID V++
Sbjct:   79 PDKDISLYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLASGAKGKRFALPNSRVMIHQPLGGARGQASDIEIQAREILYLKERLNNLLAQHTGQDVERIARDTDRDNFMSSEDAKAYGLIDQVLL 214          
BLAST of CN186651 vs. ExPASy Swiss-Prot
Match: CLPP_BURCA (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia cenocepacia (strain AU 1054) GN=clpP PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 9.493e-49
Identity = 91/136 (66.91%), Postives = 118/136 (86.76%), Query Frame = -2
Query:  379 PNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVIM 786
            P+KDI +Y+NSPGGSV+AGMAI+DT++ I+PDVST+C+GLAASMGAFLL++G KGKR++LPNSR+MIHQPLGGA+G  SDI++QA E+L+ K  LN  L+ HTGQ +E+I  DTDRD FMS+E+AK YGLID V++
Sbjct:   79 PDKDISLYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLASGAKGKRFALPNSRVMIHQPLGGARGQASDIEIQAREILYLKERLNNLLAQHTGQDVERIARDTDRDNFMSSEDAKAYGLIDQVLL 214          
BLAST of CN186651 vs. ExPASy Swiss-Prot
Match: CLPP_BURS3 (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia sp. (strain 383) GN=clpP PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.619e-48
Identity = 91/136 (66.91%), Postives = 118/136 (86.76%), Query Frame = -2
Query:  379 PNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVIM 786
            P+KDI +Y+NSPGGSV+AGMAI+DT++ I+PDVST+C+GLAASMGAFLL++G KGKR++LPNSR+MIHQPLGGA+G  SDI++QA E+L+ K  LN  L+ HTGQ +E+I  DTDRD FMS+E+AK YGLID V++
Sbjct:   79 PDKDISLYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLASGAKGKRFALPNSRVMIHQPLGGARGQASDIEIQAREILYLKERLNQLLAQHTGQDVERIARDTDRDNFMSSEDAKAYGLIDQVLL 214          
BLAST of CN186651 vs. ExPASy Swiss-Prot
Match: CLPP_THIDA (ATP-dependent Clp protease proteolytic subunit OS=Thiobacillus denitrificans (strain ATCC 25259) GN=clpP PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 2.115e-48
Identity = 91/135 (67.41%), Postives = 115/135 (85.19%), Query Frame = -2
Query:  382 PNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVI 786
            P+KDI +Y+NSPGGSV+AG+AI+DT++ I+PDVST+C+G AASMGAFLL+AG KGKRY LPNSR+MIHQPLGG QG  SDI++ A E+L+ KA LNG L+ HTGQ+LE I+ DTDRD FMSAE++  YGL+D V+
Sbjct:   70 PDKDIYLYINSPGGSVSAGLAIYDTMQFIKPDVSTLCIGQAASMGAFLLTAGAKGKRYCLPNSRVMIHQPLGGFQGQASDIEIHAKEILYLKARLNGMLAKHTGQSLEVIDRDTDRDNFMSAEDSVKYGLVDKVL 204          
BLAST of CN186651 vs. ExPASy Swiss-Prot
Match: CLPP_BURVG (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=clpP PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 2.115e-48
Identity = 90/136 (66.18%), Postives = 118/136 (86.76%), Query Frame = -2
Query:  379 PNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVIM 786
            P+KDI +Y+NSPGGSV+AGMAI+DT++ I+PDVST+C+GLAASMGAFLL++G KGKR++LPNSR+MIHQPLGGA+G  SDI++QA E+L+ K  LN  L+ HTGQ +E+I  DTDRD FMS+++AK YGLID V++
Sbjct:   79 PDKDISLYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLASGAKGKRFALPNSRVMIHQPLGGARGQASDIEIQAREILYLKERLNNLLAQHTGQDVERIARDTDRDNFMSSDDAKAYGLIDQVLL 214          
BLAST of CN186651 vs. ExPASy Swiss-Prot
Match: CLPP_BURTA (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=clpP PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.762e-48
Identity = 90/134 (67.16%), Postives = 117/134 (87.31%), Query Frame = -2
Query:  385 PNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGV 786
            P+KDI +Y+NSPGGSV+AGMAI+DT++ ++PDVST+C+GLAASMGAFLL++G KGKRY+LPN+R+MIHQPLGGA+G  SDI++QA E+L+ K  LN  L++HTGQ +E+I  DTDRD FMS+E+AK YGLID V
Sbjct:   69 PDKDISLYINSPGGSVSAGMAIYDTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKRYALPNARVMIHQPLGGARGQASDIEIQAREILYLKDRLNHLLAHHTGQDVERIARDTDRDNFMSSEDAKAYGLIDHV 202          
BLAST of CN186651 vs. ExPASy Swiss-Prot
Match: CLPP3_PROMT (ATP-dependent Clp protease proteolytic subunit 3 OS=Prochlorococcus marinus (strain NATL2A) GN=clpP3 PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.762e-48
Identity = 92/141 (65.25%), Postives = 115/141 (81.56%), Query Frame = -2
Query:  364 PNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVIMNPHKI 786
            P KDI +Y+NSPGGSVTAG+AI+DT++ + PDV T+C GLAASMGAFLLS GTKGKR +LPNSRIMIHQPLGGAQG   +I++QA E+L+ K  LN  L+ HTGQ ++KI+EDTDRD F+S +EA +YGLID V+ N + I
Sbjct:   54 PEKDIQLYVNSPGGSVTAGLAIYDTMQQVSPDVITICYGLAASMGAFLLSGGTKGKRLALPNSRIMIHQPLGGAQGQAVEIEIQAKEILYLKETLNSLLAEHTGQNIQKISEDTDRDHFLSPQEAVEYGLIDKVVSNLNSI 194          
BLAST of CN186651 vs. ExPASy Swiss-Prot
Match: CLPP1_SYNSC (ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus sp. (strain CC9605) GN=clpP1 PE=3 SV=2)

HSP 1 Score: 192.2 bits (487), Expect = 2.762e-48
Identity = 91/135 (67.41%), Postives = 113/135 (83.70%), Query Frame = -2
Query:  382 PNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVI 786
            P KDI +Y+NSPGGSVTAG+AI+DT++ + PDV T+C GLAASMGAFLLS GTKGKR +LPN+RIMIHQPLGGAQG   DI++QA E+L+ K  LNG ++ HTGQ L+KI+EDTDRD+F+S  EA +YGLID V+
Sbjct:   61 PEKDIQIYINSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPNARIMIHQPLGGAQGQAVDIEIQAKEILYLKETLNGLMAEHTGQPLDKISEDTDRDYFLSPAEAVEYGLIDRVV 195          
BLAST of CN186651 vs. ExPASy Swiss-Prot
Match: CLPP_NITSB (ATP-dependent Clp protease proteolytic subunit OS=Nitratiruptor sp. (strain SB155-2) GN=clpP PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 3.607e-48
Identity = 89/135 (65.93%), Postives = 119/135 (88.15%), Query Frame = -2
Query:  382 PNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVI 786
            P+KDI +Y+NSPGG +T+GM+I+DT+ +I+PDVST+C+G AASMGAFLLS+GTKGKRY+LP++RIMIHQPLGGAQG  +DI++QA E+L  K  LN  L+ +TGQ+++KI +DT+RDFFMS+EEAK+YGLID V+
Sbjct:   57 PDKDIYLYINSPGGVITSGMSIYDTMNYIKPDVSTICIGQAASMGAFLLSSGTKGKRYALPHARIMIHQPLGGAQGQATDIEIQAKEILRLKKILNEILAENTGQSVKKIAKDTERDFFMSSEEAKEYGLIDQVL 191          
BLAST of CN186651 vs. ExPASy Swiss-Prot
Match: CLPP3_PROMP (ATP-dependent Clp protease proteolytic subunit 3 OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=clpP3 PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 4.711e-48
Identity = 93/137 (67.88%), Postives = 113/137 (82.48%), Query Frame = -2
Query:  376 PNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVIMN 786
            P+KDI +Y+NSPGGSVTAG+AI+DT++ I PDV T+C G+AASMGAFLLS G KGKR +LPNSRIMIHQPLGGAQG   +I++QA E+L  K  LN  L+ HT Q+LEKINEDT+RD+F+S EEA +YGLID VI N
Sbjct:   77 PHKDIQIYINSPGGSVTAGLAIYDTMQQISPDVVTICFGVAASMGAFLLSGGAKGKRLALPNSRIMIHQPLGGAQGQAVEIEIQAKEILFLKKTLNSLLAKHTNQSLEKINEDTERDYFLSPEEAVEYGLIDKVIKN 213          
The following BLAST results are available for this feature:
BLAST of CN186651 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPP_BURCH9.493e-4966.91ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_BURCA9.493e-4966.91ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_BURS31.619e-4866.91ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_THIDA2.115e-4867.41ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_BURVG2.115e-4866.18ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_BURTA2.762e-4867.16ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP3_PROMT2.762e-4865.25ATP-dependent Clp protease proteolytic subunit 3 O... [more]
CLPP1_SYNSC2.762e-4867.41ATP-dependent Clp protease proteolytic subunit 1 O... [more]
CLPP_NITSB3.607e-4865.93ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP3_PROMP4.711e-4867.88ATP-dependent Clp protease proteolytic subunit 3 O... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0003D22_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0003D22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186651 ID=CN186651; Name=CN186651; organism=Citrus sinensis; type=EST; length=787bp
TTTTTTTTTTTTTCATATGAAGCTTGTGTCGCCATTTCTTCATATGGTCC
CTACAACATCAAAATGGATTATATTGAGAAAATGTAATTCCATGCAATAC
ATGAATCCTAAAACTGAAATTTCCCACAATGGTTGATAATTTTGGCTTTC
CTACGGTTTTAAAAAAGCATTCAATCACCAATCTGTACATGAAACAGGCA
GTAGAGGTTTCCTGATCATTGTGTTTTAACTTTCCAACTGGACTATGTAT
CTGATAGAAATGCTAAAACTAAAACCTTTGGATGGGAAAGCTACGGTTAC
AAAGTTAAGTTGACGCACTTGGCTTGATTTTCACTGACCAGCAGCAGCTG
CTACTGGCTGCAGAATCTTGTGAGGATTCATGATGACACCATCTATAAGA
CCGTAGTCTTTAGCTTCTTCTGCACTCATGAAGAAATCGCGATCGGTGTC
CTCGTTGATCTTCTCAAGGGTTTGACCAGTATGGTAAGACAGATACCCAT
TCAAATTTGCCTTGTGATGGAGCATCTCATTTGCCTGGAGATCAATATCA
CTTTGCCCTCCTTGTGCCCCACCAAGAGGCTGATGGATCATTATCCTTGA
GTTTGGAAGACTGTATCTTTTCCCTTTGGTGCCAGCACTAAGCAGAAAAG
CCCCCATACTGGCTGCCAGTCCAACACATACAGTGGAAACATCCGGTCGT
ATGTGCCTGATTGTATCAAAAATGGCCATACCAGCCGTCACTGATCCTCC
AGGAGAGTTCAGATACATGATAATATCCTTGTTTGGA
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