CN186651

Overview
NameCN186651
Unique NameCN186651
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length787
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9833 contig Csv1_Contig9833:504..1289. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CN186651 vs. ExPASy Swiss-Prot
Match: CLPP_STAAT (ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=clpP PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 6.803e-47
Identity = 86/134 (64.18%), Postives = 114/134 (85.07%), Query Frame = -2 
Query:  379 KDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVIM 780
            KDI +Y+NSPGGSVTAG AI+DTI+HI+PDV T+C+G+AASMG+FLL+AG KGKR++LPN+ +MIHQPLGGAQG  ++I++ AN +L  +  LN  LS  TGQ++EKI +DTDRD F++AEEAK+YGLID V++
Sbjct:   58 KDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMV 191
[Close]
BLAST of CN186651 vs. ExPASy Swiss-Prot
Match: CLPP_STAAS (ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus aureus (strain MSSA476) GN=clpP PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 6.803e-47
Identity = 86/134 (64.18%), Postives = 114/134 (85.07%), Query Frame = -2 
Query:  379 KDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVIM 780
            KDI +Y+NSPGGSVTAG AI+DTI+HI+PDV T+C+G+AASMG+FLL+AG KGKR++LPN+ +MIHQPLGGAQG  ++I++ AN +L  +  LN  LS  TGQ++EKI +DTDRD F++AEEAK+YGLID V++
Sbjct:   58 KDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMV 191
[Close]
BLAST of CN186651 vs. ExPASy Swiss-Prot
Match: CLPP_STAAR (ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus aureus (strain MRSA252) GN=clpP PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 6.803e-47
Identity = 86/134 (64.18%), Postives = 114/134 (85.07%), Query Frame = -2 
Query:  379 KDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVIM 780
            KDI +Y+NSPGGSVTAG AI+DTI+HI+PDV T+C+G+AASMG+FLL+AG KGKR++LPN+ +MIHQPLGGAQG  ++I++ AN +L  +  LN  LS  TGQ++EKI +DTDRD F++AEEAK+YGLID V++
Sbjct:   58 KDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMV 191
[Close]
BLAST of CN186651 vs. ExPASy Swiss-Prot
Match: CLPP_STAAN (ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus aureus (strain N315) GN=clpP PE=1 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 6.803e-47
Identity = 86/134 (64.18%), Postives = 114/134 (85.07%), Query Frame = -2 
Query:  379 KDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVIM 780
            KDI +Y+NSPGGSVTAG AI+DTI+HI+PDV T+C+G+AASMG+FLL+AG KGKR++LPN+ +MIHQPLGGAQG  ++I++ AN +L  +  LN  LS  TGQ++EKI +DTDRD F++AEEAK+YGLID V++
Sbjct:   58 KDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMV 191
[Close]
BLAST of CN186651 vs. ExPASy Swiss-Prot
Match: CLPP_STAAM (ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=clpP PE=1 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 6.803e-47
Identity = 86/134 (64.18%), Postives = 114/134 (85.07%), Query Frame = -2 
Query:  379 KDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVIM 780
            KDI +Y+NSPGGSVTAG AI+DTI+HI+PDV T+C+G+AASMG+FLL+AG KGKR++LPN+ +MIHQPLGGAQG  ++I++ AN +L  +  LN  LS  TGQ++EKI +DTDRD F++AEEAK+YGLID V++
Sbjct:   58 KDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMV 191
[Close]
BLAST of CN186651 vs. ExPASy Swiss-Prot
Match: CLPP_STAAE (ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus aureus (strain Newman) GN=clpP PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 6.803e-47
Identity = 86/134 (64.18%), Postives = 114/134 (85.07%), Query Frame = -2 
Query:  379 KDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVIM 780
            KDI +Y+NSPGGSVTAG AI+DTI+HI+PDV T+C+G+AASMG+FLL+AG KGKR++LPN+ +MIHQPLGGAQG  ++I++ AN +L  +  LN  LS  TGQ++EKI +DTDRD F++AEEAK+YGLID V++
Sbjct:   58 KDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMV 191
[Close]
BLAST of CN186651 vs. ExPASy Swiss-Prot
Match: CLPP_STAAC (ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus aureus (strain COL) GN=clpP PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 6.803e-47
Identity = 86/134 (64.18%), Postives = 114/134 (85.07%), Query Frame = -2 
Query:  379 KDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVIM 780
            KDI +Y+NSPGGSVTAG AI+DTI+HI+PDV T+C+G+AASMG+FLL+AG KGKR++LPN+ +MIHQPLGGAQG  ++I++ AN +L  +  LN  LS  TGQ++EKI +DTDRD F++AEEAK+YGLID V++
Sbjct:   58 KDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMV 191
[Close]
BLAST of CN186651 vs. ExPASy Swiss-Prot
Match: CLPP_STAAB (ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=clpP PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 6.803e-47
Identity = 86/134 (64.18%), Postives = 114/134 (85.07%), Query Frame = -2 
Query:  379 KDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVIM 780
            KDI +Y+NSPGGSVTAG AI+DTI+HI+PDV T+C+G+AASMG+FLL+AG KGKR++LPN+ +MIHQPLGGAQG  ++I++ AN +L  +  LN  LS  TGQ++EKI +DTDRD F++AEEAK+YGLID V++
Sbjct:   58 KDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMV 191
[Close]
BLAST of CN186651 vs. ExPASy Swiss-Prot
Match: CLPP_STAA9 (ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus aureus (strain JH9) GN=clpP PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 6.803e-47
Identity = 86/134 (64.18%), Postives = 114/134 (85.07%), Query Frame = -2 
Query:  379 KDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVIM 780
            KDI +Y+NSPGGSVTAG AI+DTI+HI+PDV T+C+G+AASMG+FLL+AG KGKR++LPN+ +MIHQPLGGAQG  ++I++ AN +L  +  LN  LS  TGQ++EKI +DTDRD F++AEEAK+YGLID V++
Sbjct:   58 KDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMV 191
[Close]
BLAST of CN186651 vs. ExPASy Swiss-Prot
Match: CLPP_STAA8 (ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus aureus (strain NCTC 8325) GN=clpP PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 6.803e-47
Identity = 86/134 (64.18%), Postives = 114/134 (85.07%), Query Frame = -2 
Query:  379 KDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVIM 780
            KDI +Y+NSPGGSVTAG AI+DTI+HI+PDV T+C+G+AASMG+FLL+AG KGKR++LPN+ +MIHQPLGGAQG  ++I++ AN +L  +  LN  LS  TGQ++EKI +DTDRD F++AEEAK+YGLID V++
Sbjct:   58 KDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMV 191
The following BLAST results are available for this feature:
BLAST of CN186651 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPP_STAAT6.803e-4764.18ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_STAAS6.803e-4764.18ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_STAAR6.803e-4764.18ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_STAAN6.803e-4764.18ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_STAAM6.803e-4764.18ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_STAAE6.803e-4764.18ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_STAAC6.803e-4764.18ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_STAAB6.803e-4764.18ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_STAA96.803e-4764.18ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_STAA86.803e-4764.18ATP-dependent Clp protease proteolytic subunit OS=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0003D22_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0003D22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186651 ID=CN186651; Name=CN186651; organism=Citrus sinensis; type=EST; length=787bp
TTTTTTTTTTTTTCATATGAAGCTTGTGTCGCCATTTCTTCATATGGTCC
CTACAACATCAAAATGGATTATATTGAGAAAATGTAATTCCATGCAATAC
ATGAATCCTAAAACTGAAATTTCCCACAATGGTTGATAATTTTGGCTTTC
CTACGGTTTTAAAAAAGCATTCAATCACCAATCTGTACATGAAACAGGCA
GTAGAGGTTTCCTGATCATTGTGTTTTAACTTTCCAACTGGACTATGTAT
CTGATAGAAATGCTAAAACTAAAACCTTTGGATGGGAAAGCTACGGTTAC
AAAGTTAAGTTGACGCACTTGGCTTGATTTTCACTGACCAGCAGCAGCTG
CTACTGGCTGCAGAATCTTGTGAGGATTCATGATGACACCATCTATAAGA
CCGTAGTCTTTAGCTTCTTCTGCACTCATGAAGAAATCGCGATCGGTGTC
CTCGTTGATCTTCTCAAGGGTTTGACCAGTATGGTAAGACAGATACCCAT
TCAAATTTGCCTTGTGATGGAGCATCTCATTTGCCTGGAGATCAATATCA
CTTTGCCCTCCTTGTGCCCCACCAAGAGGCTGATGGATCATTATCCTTGA
GTTTGGAAGACTGTATCTTTTCCCTTTGGTGCCAGCACTAAGCAGAAAAG
CCCCCATACTGGCTGCCAGTCCAACACATACAGTGGAAACATCCGGTCGT
ATGTGCCTGATTGTATCAAAAATGGCCATACCAGCCGTCACTGATCCTCC
AGGAGAGTTCAGATACATGATAATATCCTTGTTTGGA
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