CN186651

Overview
NameCN186651
Unique NameCN186651
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length787
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN186651 vs. ExPASy Swiss-Prot
Match: CLPP_HELPY (ATP-dependent Clp protease proteolytic subunit OS=Helicobacter pylori GN=clpP PE=1 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 8.885e-47
Identity = 88/135 (65.19%), Postives = 115/135 (85.19%), Query Frame = -2 
Query:  382 PNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVI 786
            P KDI +Y+NSPGG +T+G++I+DT+  IRPDVST+C+G AASMGAFLLS G KGKR+SLP+SRIMIHQPLGGAQG  SDI++ +NE+L  K  +N  L+ ++GQ+LE+I +DTDRDF+MSA+EAK+YGLID V+
Sbjct:   57 PEKDIGLYINSPGGVITSGLSIYDTMNFIRPDVSTICIGQAASMGAFLLSCGAKGKRFSLPHSRIMIHQPLGGAQGQASDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSAKEAKEYGLIDKVL 191
[Close]
BLAST of CN186651 vs. ExPASy Swiss-Prot
Match: CLPP_HELPS (ATP-dependent Clp protease proteolytic subunit OS=Helicobacter pylori (strain Shi470) GN=clpP PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 8.885e-47
Identity = 88/135 (65.19%), Postives = 115/135 (85.19%), Query Frame = -2 
Query:  382 PNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVI 786
            P KDI +Y+NSPGG +T+G++I+DT+  IRPDVST+C+G AASMGAFLLS G KGKR+SLP+SRIMIHQPLGGAQG  SDI++ +NE+L  K  +N  L+ ++GQ+LE+I +DTDRDF+MSA+EAK+YGLID V+
Sbjct:   56 PEKDIGLYINSPGGVITSGLSIYDTMNFIRPDVSTICIGQAASMGAFLLSCGAKGKRFSLPHSRIMIHQPLGGAQGQASDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSAKEAKEYGLIDKVL 190
[Close]
BLAST of CN186651 vs. ExPASy Swiss-Prot
Match: CLPP_HELPJ (ATP-dependent Clp protease proteolytic subunit OS=Helicobacter pylori J99 GN=clpP PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 8.885e-47
Identity = 88/135 (65.19%), Postives = 115/135 (85.19%), Query Frame = -2 
Query:  382 PNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVI 786
            P KDI +Y+NSPGG +T+G++I+DT+  IRPDVST+C+G AASMGAFLLS G KGKR+SLP+SRIMIHQPLGGAQG  SDI++ +NE+L  K  +N  L+ ++GQ+LE+I +DTDRDF+MSA+EAK+YGLID V+
Sbjct:   56 PEKDIGLYINSPGGVITSGLSIYDTMNFIRPDVSTICIGQAASMGAFLLSCGAKGKRFSLPHSRIMIHQPLGGAQGQASDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSAKEAKEYGLIDKVL 190
[Close]
BLAST of CN186651 vs. ExPASy Swiss-Prot
Match: CLPP_HELPH (ATP-dependent Clp protease proteolytic subunit OS=Helicobacter pylori (strain HPAG1) GN=clpP PE=3 SV=2)

HSP 1 Score: 187.193 bits (474), Expect = 8.885e-47
Identity = 88/135 (65.19%), Postives = 115/135 (85.19%), Query Frame = -2 
Query:  382 PNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVI 786
            P KDI +Y+NSPGG +T+G++I+DT+  IRPDVST+C+G AASMGAFLLS G KGKR+SLP+SRIMIHQPLGGAQG  SDI++ +NE+L  K  +N  L+ ++GQ+LE+I +DTDRDF+MSA+EAK+YGLID V+
Sbjct:   56 PEKDIGLYINSPGGVITSGLSIYDTMNFIRPDVSTICIGQAASMGAFLLSCGAKGKRFSLPHSRIMIHQPLGGAQGQASDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSAKEAKEYGLIDKVL 190
[Close]
BLAST of CN186651 vs. ExPASy Swiss-Prot
Match: CLPP_HELPG (ATP-dependent Clp protease proteolytic subunit OS=Helicobacter pylori (strain G27) GN=clpP PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 8.885e-47
Identity = 88/135 (65.19%), Postives = 115/135 (85.19%), Query Frame = -2 
Query:  382 PNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVI 786
            P KDI +Y+NSPGG +T+G++I+DT+  IRPDVST+C+G AASMGAFLLS G KGKR+SLP+SRIMIHQPLGGAQG  SDI++ +NE+L  K  +N  L+ ++GQ+LE+I +DTDRDF+MSA+EAK+YGLID V+
Sbjct:   56 PEKDIGLYINSPGGVITSGLSIYDTMNFIRPDVSTICIGQAASMGAFLLSCGAKGKRFSLPHSRIMIHQPLGGAQGQASDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSAKEAKEYGLIDKVL 190
[Close]
BLAST of CN186651 vs. ExPASy Swiss-Prot
Match: CLPP_AZOSB (ATP-dependent Clp protease proteolytic subunit OS=Azoarcus sp. (strain BH72) GN=clpP PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 8.885e-47
Identity = 88/135 (65.19%), Postives = 113/135 (83.70%), Query Frame = -2 
Query:  382 PNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVI 786
            P+KDI  Y+NSPGGSVTAG+AI+DT++ I+P+VST+C+G AASMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG  SDI++ A E+L+ +  LNG L+ HTGQT+E+I +DTDRD FMSA  A +YGL+D V+
Sbjct:   72 PDKDIYFYINSPGGSVTAGLAIYDTMQFIKPNVSTLCIGQAASMGAFLLAAGEKGKRFCLPNSRVMIHQPLGGFQGQASDIEIHAREILYLRERLNGMLAKHTGQTIEQIEKDTDRDNFMSATAAVEYGLVDKVL 206
[Close]
BLAST of CN186651 vs. ExPASy Swiss-Prot
Match: CLPP_STAES (ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus epidermidis (strain ATCC 12228) GN=clpP PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.160e-46
Identity = 88/138 (63.77%), Postives = 114/138 (82.61%), Query Frame = -2 
Query:  367 KDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVIMNPHK 780
            KDI +Y+NSPGGSVTAG AI+DTI+HI+PDV T+C+G+AASMG+FLL+AG KGKR++LPN+ +MIHQPLGGAQG  ++I++ AN +L  +  LN  LS  TGQ++EKI +DTDRD F++A EAK+YGLID V M P K
Sbjct:   58 KDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQQDTDRDNFLTAAEAKEYGLIDEV-MEPEK 194
[Close]
BLAST of CN186651 vs. ExPASy Swiss-Prot
Match: CLPP_STAEQ (ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=clpP PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.160e-46
Identity = 88/138 (63.77%), Postives = 114/138 (82.61%), Query Frame = -2 
Query:  367 KDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVIMNPHK 780
            KDI +Y+NSPGGSVTAG AI+DTI+HI+PDV T+C+G+AASMG+FLL+AG KGKR++LPN+ +MIHQPLGGAQG  ++I++ AN +L  +  LN  LS  TGQ++EKI +DTDRD F++A EAK+YGLID V M P K
Sbjct:   58 KDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQQDTDRDNFLTAAEAKEYGLIDEV-MEPEK 194
[Close]
BLAST of CN186651 vs. ExPASy Swiss-Prot
Match: CLPP_NATTJ (ATP-dependent Clp protease proteolytic subunit OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=clpP PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.160e-46
Identity = 85/138 (61.59%), Postives = 116/138 (84.06%), Query Frame = -2 
Query:  373 PNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVIMNP 786
            P+KDI +Y+NSPGG V AG+AI+DT+++IR DVST+CVG+AASMGA LL+AG +GKR+ LPNSRIM+HQP+GGAQG  +D+++ A E++  K  LN  L++HTGQ +E+I++DTDRDFFMS+EEA+ YG+ID V+  P
Sbjct:   56 PDKDIHLYINSPGGHVHAGLAIYDTMQYIRSDVSTICVGMAASMGAVLLAAGNEGKRFCLPNSRIMLHQPMGGAQGQAADVEIHAREIMKTKERLNQILAHHTGQPVEQISKDTDRDFFMSSEEAQKYGVIDDVLKRP 193
[Close]
BLAST of CN186651 vs. ExPASy Swiss-Prot
Match: CLPP_CLOTH (ATP-dependent Clp protease proteolytic subunit OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=clpP PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.160e-46
Identity = 87/135 (64.44%), Postives = 112/135 (82.96%), Query Frame = -2 
Query:  382 PNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVI 786
            P+KDI +Y+NSPGGSVTAG AI+DT+++++PDVST+C+G+AASMGAFLL+AG KGKR++LPNS IMIHQPLGGA+G  +DI + A +++  K  LN  LS  TGQ  EKI  DT+RDFFMSAEEAK YG++D V+
Sbjct:   56 PDKDIQLYINSPGGSVTAGFAIYDTMQYVKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEIMIHQPLGGARGQATDIKIHAEQIIKIKNKLNRILSERTGQPFEKIERDTERDFFMSAEEAKAYGIVDEVM 190
The following BLAST results are available for this feature:
BLAST of CN186651 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPP_HELPY8.885e-4765.19ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_HELPS8.885e-4765.19ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_HELPJ8.885e-4765.19ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_HELPH8.885e-4765.19ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_HELPG8.885e-4765.19ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_AZOSB8.885e-4765.19ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_STAES1.160e-4663.77ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_STAEQ1.160e-4663.77ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_NATTJ1.160e-4661.59ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_CLOTH1.160e-4664.44ATP-dependent Clp protease proteolytic subunit OS=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0003D22_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0003D22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186651 ID=CN186651; Name=CN186651; organism=Citrus sinensis; type=EST; length=787bp
TTTTTTTTTTTTTCATATGAAGCTTGTGTCGCCATTTCTTCATATGGTCC
CTACAACATCAAAATGGATTATATTGAGAAAATGTAATTCCATGCAATAC
ATGAATCCTAAAACTGAAATTTCCCACAATGGTTGATAATTTTGGCTTTC
CTACGGTTTTAAAAAAGCATTCAATCACCAATCTGTACATGAAACAGGCA
GTAGAGGTTTCCTGATCATTGTGTTTTAACTTTCCAACTGGACTATGTAT
CTGATAGAAATGCTAAAACTAAAACCTTTGGATGGGAAAGCTACGGTTAC
AAAGTTAAGTTGACGCACTTGGCTTGATTTTCACTGACCAGCAGCAGCTG
CTACTGGCTGCAGAATCTTGTGAGGATTCATGATGACACCATCTATAAGA
CCGTAGTCTTTAGCTTCTTCTGCACTCATGAAGAAATCGCGATCGGTGTC
CTCGTTGATCTTCTCAAGGGTTTGACCAGTATGGTAAGACAGATACCCAT
TCAAATTTGCCTTGTGATGGAGCATCTCATTTGCCTGGAGATCAATATCA
CTTTGCCCTCCTTGTGCCCCACCAAGAGGCTGATGGATCATTATCCTTGA
GTTTGGAAGACTGTATCTTTTCCCTTTGGTGCCAGCACTAAGCAGAAAAG
CCCCCATACTGGCTGCCAGTCCAACACATACAGTGGAAACATCCGGTCGT
ATGTGCCTGATTGTATCAAAAATGGCCATACCAGCCGTCACTGATCCTCC
AGGAGAGTTCAGATACATGATAATATCCTTGTTTGGA
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