CN186650
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186650 vs. ExPASy Swiss-Prot
Match: SYD_THEAC (Aspartyl-tRNA synthetase OS=Thermoplasma acidophilum GN=aspS PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.632e-14 Identity = 32/55 (58.18%), Postives = 44/55 (80.00%), Query Frame = 1 Query: 16 IDVKTISTYIDSFRYGAPPHGGFGVGLERVVMLFCGLNNIRKTSLYPRDPLRIAP 180 +DVK+ Y+D+F+YG PPH G+G+GLER+ M+ GLNNIR+T+L+PRD RI P Sbjct: 374 LDVKSFQFYVDAFKYGMPPHAGWGLGLERLTMILLGLNNIRETTLFPRDRTRIVP 428
BLAST of CN186650 vs. ExPASy Swiss-Prot
Match: SYDC1_DICDI (Aspartyl-tRNA synthetase, cytoplasmic 1 OS=Dictyostelium discoideum GN=aspS1 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 8.736e-13 Identity = 34/56 (60.71%), Postives = 40/56 (71.43%), Query Frame = 1 Query: 13 GIDVKTISTYIDSFRYGAPPHGGFGVGLERVVMLFCGLNNIRKTSLYPRDPLRIAP 180 G+ ++ I YIDSF+YG H G GVGLERVVML+ GL NIRK S PRDP R+ P Sbjct: 521 GVVIEDIQGYIDSFKYGCSQHAGGGVGLERVVMLYLGLGNIRKASFCPRDPTRLTP 576
BLAST of CN186650 vs. ExPASy Swiss-Prot
Match: SYD_THEVO (Aspartyl-tRNA synthetase OS=Thermoplasma volcanium GN=aspS PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.395e-12 Identity = 29/55 (52.73%), Postives = 42/55 (76.36%), Query Frame = 1 Query: 16 IDVKTISTYIDSFRYGAPPHGGFGVGLERVVMLFCGLNNIRKTSLYPRDPLRIAP 180 +++ + YI +F+YG PPH G+G+GLER+ M+ GLNNIR+T+L+PRD RI P Sbjct: 374 LNIDSFKFYIQAFKYGMPPHAGWGLGLERLTMIVLGLNNIRETTLFPRDRTRIIP 428
BLAST of CN186650 vs. ExPASy Swiss-Prot
Match: SYD_HALSA (Aspartyl-tRNA synthetase OS=Halobacterium salinarium GN=aspS PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.659e-12 Identity = 26/56 (46.43%), Postives = 42/56 (75.00%), Query Frame = 1 Query: 13 GIDVKTISTYIDSFRYGAPPHGGFGVGLERVVMLFCGLNNIRKTSLYPRDPLRIAP 180 G++ + Y+D+FRYG PPHGG+G+G++R++ GL+NI++ L+PRDP R+ P Sbjct: 381 GVEPENFEFYLDAFRYGVPPHGGYGLGIDRLIQQLAGLDNIKEAILFPRDPDRLEP 436
BLAST of CN186650 vs. ExPASy Swiss-Prot
Match: SYDC_ENCCU (Probable aspartyl-tRNA synthetase, cytoplasmic OS=Encephalitozoon cuniculi GN=ECU06_0790 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.648e-11 Identity = 29/60 (48.33%), Postives = 44/60 (73.33%), Query Frame = 1 Query: 1 IQACGIDVKTISTYIDSFRYGAPPHGGFGVGLERVVMLFCGLNNIRKTSLYPRDPLRIAP 180 ++ GI ++ Y++SF+YGAPPHGG G+GLER++ + G+ +IR SL+PRDP R+ P Sbjct: 414 VEEHGISPSSLGGYLESFKYGAPPHGGCGIGLERLMKAYFGMGDIRCFSLFPRDPNRLYP 473
BLAST of CN186650 vs. ExPASy Swiss-Prot
Match: SYDC_YEAST (Aspartyl-tRNA synthetase, cytoplasmic OS=Saccharomyces cerevisiae GN=DPS1 PE=1 SV=3) HSP 1 Score: 68.9366 bits (167), Expect = 3.670e-11 Identity = 29/50 (58.00%), Postives = 35/50 (70.00%), Query Frame = 1 Query: 31 ISTYIDSFRYGAPPHGGFGVGLERVVMLFCGLNNIRKTSLYPRDPLRIAP 180 + Y D F YG PPH G G+GLERVVM + L NIR+ SL+PRDP R+ P Sbjct: 508 LKDYCDGFSYGCPPHAGGGIGLERVVMFYLDLKNIRRASLFPRDPKRLRP 557 The following BLAST results are available for this feature:
BLAST of CN186650 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186650 ID=CN186650; Name=CN186650; organism=Citrus sinensis; type=EST; length=804bpback to top |