CN186590
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186590 vs. ExPASy Swiss-Prot
Match: RLA0L_HUMAN (60S acidic ribosomal protein P0-like OS=Homo sapiens PE=1 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 7.995e-41 Identity = 90/178 (50.56%), Postives = 114/178 (64.04%), Query Frame = 2 Query: 179 KASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKL 712 + +A K Y K+ QLL++Y + + ADNVGS Q+Q IR LRG VVLMGKNTMM++ IR H E N A L+P + GNVG +FTK DL A AR G +AP +V VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LI+ GDKVG+SEA LL L Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKVVVLMGKNTMMRKAIRGHLEN--NPALEKLLPHIWGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNML 178
BLAST of CN186590 vs. ExPASy Swiss-Prot
Match: RLA0_NEUCR (60S acidic ribosomal protein P0 OS=Neurospora crassa GN=crpp0 PE=2 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 8.839e-40 Identity = 83/175 (47.43%), Postives = 111/175 (63.43%), Query Frame = 2 Query: 188 KAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKL 712 K+ K Y KL LLE+Y I + + DNV S Q+ IR+ LRG++VVLMGKNTM++R ++ T + L+P ++GNVG +FT GDL APAR G +AP DV +P GNTG++P +TSFFQ L +PTKI +GT+EI T ++L+ G KVG SEA LL L Sbjct: 4 KSANKAGYFDKLKGLLEDYRSIFIVSVDNVSSQQMHEIRQSLRGEAVVLMGKNTMVRRALKTFVADTPE--YERLLPFVKGNVGFVFTNGDLKEVRDKILANKVAAPARAGAIAPADVWIPAGNTGMEPGKTSFFQALGVPTKIARGTIEITTDLKLVEAGAKVGPSEATLLNML 176
BLAST of CN186590 vs. ExPASy Swiss-Prot
Match: RLA0_PODAN (60S acidic ribosomal protein P0 OS=Podospora anserina PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 4.387e-39 Identity = 83/175 (47.43%), Postives = 109/175 (62.29%), Query Frame = 2 Query: 188 KAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKL 712 K+ K Y KL LLEEY I + + DNV S Q+ IR+ LR VVLMGKNTM++R ++ + + L+P ++GNVG +FT GDL APAR G VAP+DV +P GNTG++P +TSFFQ L +PTKI +GT+EI T ++L+ G KVG SEA LL L Sbjct: 4 KSANKAGYFDKLKGLLEEYKSIFIVSVDNVSSQQMHEIRQALRDQGVVLMGKNTMVRRALKTFL--VDSPEYERLLPFVKGNVGFVFTNGDLKEIRDKILANKVAAPARAGAVAPVDVWIPAGNTGMEPGKTSFFQALGVPTKIARGTIEITTDLKLVEAGAKVGPSEATLLNML 176
BLAST of CN186590 vs. ExPASy Swiss-Prot
Match: RLA0_YEAST (60S acidic ribosomal protein P0 OS=Saccharomyces cerevisiae GN=RPP0 PE=1 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.011e-35 Identity = 80/170 (47.06%), Postives = 107/170 (62.94%), Query Frame = 2 Query: 194 EKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALL 703 EKK Y AKL + LEEY + V DNV S Q+ +R+ LRG +VVLMGKNTM++R IR + F L+P ++G VG +FT L APAR G VAP D+ V NTG++P +TSFFQ L +PTKI +GT+EI++ V+++ G+KVG SEA+LL Sbjct: 6 EKKAEYFAKLREYLEEYKSLFVVGVDNVSSQQMHEVRKELRGRAVVLMGKNTMVRRAIRGFLSDLPD--FEKLLPFVKGYVGFVFTNEPLTEIKNVIVSNRVAAPARAGAVAPEDIWVRAVNTGMEPGKTSFFQALGVPTKIARGTIEIVSDVKVVDAGNKVGQSEASLL 173
BLAST of CN186590 vs. ExPASy Swiss-Prot
Match: RLA0_PLAF8 (60S acidic ribosomal protein P0 OS=Plasmodium falciparum (isolate 7G8) GN=RPLP0 PE=2 SV=2) HSP 1 Score: 149.058 bits (375), Expect = 2.253e-35 Identity = 78/180 (43.33%), Postives = 115/180 (63.89%), Query Frame = 2 Query: 173 VVKASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGA-PARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAK 709 + K SK +KK Y KL L+++Y++IL+ DNVGSNQ+ ++R+ LRG + +LMGKNT ++ ++ + + L+PL++ N+G +F K DL + PAR+G++APIDV +PPG TG+DPS TSF + L I TKI KG +EI V LI++G+KV +S A LL K Sbjct: 1 MAKLSKQQKKQMYIEKLSSLIQQYSKILIVHVDNVGSNQMASVRKSLRGKATILMGKNTRIRTALKKNLQAVPQIE--KLLPLVKLNMGFVFCKDDLSEIRNIILDNKSSSHPARLGVIAPIDVFIPPGPTGMDPSHTSFLESLGISTKIVKGQIEIQEHVHLIKQGEKVTASSATLLRK 178
BLAST of CN186590 vs. ExPASy Swiss-Prot
Match: RLA0_SCHPO (60S acidic ribosomal protein P0 OS=Schizosaccharomyces pombe GN=rpp0 PE=2 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 3.843e-35 Identity = 79/177 (44.63%), Postives = 104/177 (58.76%), Query Frame = 2 Query: 182 ASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKL 712 A E K Y KL L E+Y + V DNV S Q+ +R+ LRG + ++MGKNTM++R +R L+P+++GNVG +FT DL APAR +AP+DV VP GNTG++P +TSFFQ L IPTKI +GT+EI + V L+ K KVG SEA LL L Sbjct: 2 AISKESKAQYFEKLRSLFEKYNSLFVVNIDNVSSQQMHTVRKQLRGTAELIMGKNTMIRRAMRGIINDMPELE--RLLPVVRGNVGFVFTNADLKEVRETIIANVIAAPARPNAIAPLDVFVPAGNTGMEPGKTSFFQALGIPTKITRGTIEITSDVHLVSKDAKVGPSEATLLNML 176
BLAST of CN186590 vs. ExPASy Swiss-Prot
Match: RLA0_EIMTE (60S acidic ribosomal protein P0 OS=Eimeria tenella PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.977e-32 Identity = 77/174 (44.25%), Postives = 105/174 (60.34%), Query Frame = 2 Query: 191 AEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKL 712 A K+ Y +L QL+ E+ ++LV +AD+VGS QL IR LRG + VLMGKNT ++ +R ++ L+PL++ NVG IF + D APA+ G+ AP DV +P G TG+DP T FFQ L I TKI KG +EI V+LIR+G++V +S A LL KL Sbjct: 6 AAKRREYFPRLLQLVLEHPRVLVVSADHVGSKQLAGIRVALRGQATVLMGKNTKIRTALRQQLQQ--QPQLQALLPLVRLNVGFIFCRADPAAVRAVVQQHKVPAPAKQGVTAPTDVFIPAGPTGMDPGSTGFFQALGISTKIVKGQIEIQQAVQLIRRGERVSASAATLLHKL 177
BLAST of CN186590 vs. ExPASy Swiss-Prot
Match: RLA0_DICDI (60S acidic ribosomal protein P0 OS=Dictyostelium discoideum GN=rplp0 PE=1 SV=2) HSP 1 Score: 138.272 bits (347), Expect = 3.977e-32 Identity = 75/174 (43.10%), Postives = 108/174 (62.07%), Query Frame = 2 Query: 191 AEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKL 712 +++K + K +L Y +++VA AD VGS+QLQ IR+ +RG VLMGK TM+++ IR A+ LN L+ N +IF K ++ GAPA+ G+ AP DV++P G TG++P+QTSF Q L I TKIN+G ++I+ V +I+ G KVG+SEA LL KL Sbjct: 6 SKRKNVFIEKATKLFTTYDKMIVAEADFVGSSQLQKIRKSIRGIGAVLMGKKTMIRKVIRDLADSKPELDALNTY--LKQNTCIIFCKDNIAEVKRVINTQRVGAPAKAGVFAPNDVIIPAGPTGMEPTQTSFLQDLKIATKINRGQIDIVNEVHIIKTGQKVGASEATLLQKL 177
BLAST of CN186590 vs. ExPASy Swiss-Prot
Match: RLA0_TRYCR (60S acidic ribosomal protein P0 OS=Trypanosoma cruzi PE=2 SV=2) HSP 1 Score: 137.117 bits (344), Expect = 8.860e-32 Identity = 77/183 (42.08%), Postives = 107/183 (58.47%), Query Frame = 2 Query: 185 SKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLI-------PLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKL 712 S +E K Y+ + L +Y ++L DNV S Q+ ++RR LRG ++MGK T+ K+ + AE +A+ L+ LL GN LIFT ++ APARVG +AP DV+VP GNTG++P TSFFQ LNI TKI KGTVEI++ +++ GD+V +S A LL KL Sbjct: 3 SVSEAKREYEERFNGCLTKYGRVLFCLMDNVRSQQVHDVRRDLRGLGELVMGKKTLQKKIVERRAEDKKASAYDKLLYNTCIEKKLLCGNTALIFTNEEIPVITAVLDKHRVQAPARVGAIAPCDVIVPAGNTGMEPKATSFFQALNIATKIAKGTVEIVSDKKVLSVGDRVDNSTATLLQKL 185
BLAST of CN186590 vs. ExPASy Swiss-Prot
Match: RLA0_LEICH (60S acidic ribosomal protein P0 OS=Leishmania chagasi GN=LCP0 PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 9.168e-29 Identity = 74/178 (41.57%), Postives = 100/178 (56.18%), Query Frame = 2 Query: 200 KIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIP-------LLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKL 712 K Y+ +L L +Y+ +L DNV S Q+ ++RRG RG + +MGK T+ + + A+ + LL GN GLIFT + APARVG + P DVVVP G+TG++P+QTSFFQ LNI TKI KG VEI+T +++ GDKV +S A LL KL Sbjct: 8 KREYEERLVDCLTKYSCVLFVGMDNVRSQQVHDVRRGCRGKAEFIMGKKTLQAKIVEKRAQAKDASPEAKPFNDQCEEYNLLSGNTGLIFTNNAVQEITSVLDGHRVKAPARVGAI-PCDVVVPAGSTGMEPTQTSFFQALNIATKIAKGMVEIVTEKKVLSVGDKVDNSTATLLQKL 184 The following BLAST results are available for this feature:
BLAST of CN186590 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 52
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186590 ID=CN186590; Name=CN186590; organism=Citrus sinensis; type=EST; length=712bpback to top |