CN186589
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186589 vs. ExPASy Swiss-Prot
Match: RLA0_CHICK (60S acidic ribosomal protein P0 OS=Gallus gallus GN=RPLP0 PE=2 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 3.675e-51 Identity = 96/167 (57.49%), Postives = 127/167 (76.05%), Query Frame = -2 Query: 269 APARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQADKVKEYLADPSKF 769 A AR G +AP DV VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LI+ GDKVG+SEA LL L I PFS+GLV+Q V++NGS+Y+PEVLD++E+ L ++F V V ++ L I YPT+A+ PH VN YK V+AVA+ T+Y+FP A+KVK +LADPS F Sbjct: 109 AAARAGAIAPCDVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHKRFLEGVRNVASVCLQIGYPTIASVPHSIVNGYKRVLAVAVETDYTFPLAEKVKAFLADPSAF 275
BLAST of CN186589 vs. ExPASy Swiss-Prot
Match: RLA0_DROME (60S acidic ribosomal protein P0 OS=Drosophila melanogaster GN=RpLP0 PE=1 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 1.069e-50 Identity = 91/167 (54.49%), Postives = 125/167 (74.85%), Query Frame = -2 Query: 269 APARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQADKVKEYLADPSKF 769 APAR G +AP+ V++P NTGL P +TSFFQ L+IPTKI+KGT+EII V +++ GDKVG+SEA LL L I PFSYGL+V VY++GS++SPE+LD+ +DL KF V+ + A+ L++ YPT+A+APH N +KN++A+A TE F +A +KEY+ DPSKF Sbjct: 109 APARPGAIAPLHVIIPAQNTGLGPEKTSFFQALSIPTKISKGTIEIINDVPILKPGDKVGASEATLLNMLNISPFSYGLIVNQVYDSGSIFSPEILDIKPEDLRAKFQQGVANLAAVCLSVGYPTIASAPHSIANGFKNLLAIAATTEVEFKEATTIKEYIKDPSKF 275
BLAST of CN186589 vs. ExPASy Swiss-Prot
Match: RLA0_CERCA (60S acidic ribosomal protein P0 OS=Ceratitis capitata GN=RpLP0 PE=3 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 2.382e-50 Identity = 91/167 (54.49%), Postives = 126/167 (75.45%), Query Frame = -2 Query: 269 APARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQADKVKEYLADPSKF 769 APAR G +AP+ V++P NTGL P +TSFFQ L+IPTKI+KGT+EII V +++ GDKVG+SEA LL L I PFSYGL + VY++GS++SPE+LD+ +DL KF + V+ + A++L I YPT+A+APH N +KN++A+A +TE F QA +KE++ DPSKF Sbjct: 109 APARAGAIAPLPVIIPAQNTGLGPEKTSFFQALSIPTKISKGTIEIINDVPILKPGDKVGASEATLLNMLNISPFSYGLAITQVYDSGSIFSPEILDIKPEDLRAKFQAGVANLAAVSLQIGYPTIASAPHSIANGFKNLLAIAASTEVEFKQAATIKEFIKDPSKF 275
BLAST of CN186589 vs. ExPASy Swiss-Prot
Match: RLA0_DANRE (60S acidic ribosomal protein P0 OS=Danio rerio GN=rplp0 PE=2 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 3.111e-50 Identity = 97/170 (57.06%), Postives = 126/170 (74.12%), Query Frame = -2 Query: 269 APARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLG---IRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQADKVKEYLADPSKF 769 A AR G +AP +V VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LI+ GDKVG+SEA LL L I PFSYGL++Q VY+NGSVYSPEVLD++ED L ++F V + ++ L I YPTLA+ PH +N YK V+AV + T+Y+FP A+KVK YLADP+ F Sbjct: 109 AAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKPGDKVGASEATLLNMLNMLNISPFSYGLIIQQVYDNGSVYSPEVLDITEDALHKRFLKGVRNIASVCLQIGYPTLASIPHTIINGYKRVLAVTVETDYTFPLAEKVKAYLADPTAF 278
BLAST of CN186589 vs. ExPASy Swiss-Prot
Match: RLA0_CAEEL (60S acidic ribosomal protein P0 OS=Caenorhabditis elegans GN=rpa-0 PE=1 SV=3) HSP 1 Score: 197.208 bits (500), Expect = 9.053e-50 Identity = 90/168 (53.57%), Postives = 130/168 (77.38%), Query Frame = -2 Query: 269 GAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQADKVKEYLADPSKF 772 GAPA+ G +AP DV +PP NTG+ P +TSFFQ L IPTKI +GT+EI+ V LI++GDKVG+SE+ALL LG+ PFSYGLVV+ VY++G++Y+PEVLD++ ++L ++F S V V +++LA++YPTLA+ H N +N++ VA T+ SF +A+ +K ++ADPSKF Sbjct: 108 GAPAKAGAIAPCDVKLPPQNTGMGPEKTSFFQALQIPTKIARGTIEILNDVHLIKEGDKVGASESALLNMLGVTPFSYGLVVRQVYDDGTLYTPEVLDMTTEELRKRFLSGVRNVASVSLAVNYPTLASVAHSLANGLQNMLGVAAVTDVSFKEAETIKAFIADPSKF 275
BLAST of CN186589 vs. ExPASy Swiss-Prot
Match: RLA0_HUMAN (60S acidic ribosomal protein P0 OS=Homo sapiens GN=RPLP0 PE=1 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 1.182e-49 Identity = 92/167 (55.09%), Postives = 126/167 (75.45%), Query Frame = -2 Query: 269 APARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQADKVKEYLADPSKF 769 A AR G +AP +V VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LI+ GDKVG+SEA LL L I PFS+GLV+Q V++NGS+Y+PEVLD++E+ L +F V V ++ L I YPT+A+ PH +N YK V+A+++ T+Y+FP A+KVK +LADPS F Sbjct: 109 AAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAF 275
BLAST of CN186589 vs. ExPASy Swiss-Prot
Match: RLA0_BOVIN (60S acidic ribosomal protein P0 OS=Bos taurus GN=RPLP0 PE=2 SV=3) HSP 1 Score: 196.823 bits (499), Expect = 1.182e-49 Identity = 92/167 (55.09%), Postives = 126/167 (75.45%), Query Frame = -2 Query: 269 APARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQADKVKEYLADPSKF 769 A AR G +AP +V VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LI+ GDKVG+SEA LL L I PFS+GLV+Q V++NGS+Y+PEVLD++E+ L +F V V ++ L I YPT+A+ PH +N YK V+A+++ T+Y+FP A+KVK +LADPS F Sbjct: 109 AAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAF 275
BLAST of CN186589 vs. ExPASy Swiss-Prot
Match: RLA0_PIG (60S acidic ribosomal protein P0 OS=Sus scrofa GN=RPLP0 PE=2 SV=2) HSP 1 Score: 196.438 bits (498), Expect = 1.544e-49 Identity = 91/167 (54.49%), Postives = 126/167 (75.45%), Query Frame = -2 Query: 269 APARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQADKVKEYLADPSKF 769 A AR G +AP +V VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LI+ GDKVG+SEA LL L I PFS+GL++Q V++NGS+Y+PEVLD++E+ L +F V V ++ L I YPT+A+ PH +N YK V+A+++ T+Y+FP A+KVK +LADPS F Sbjct: 109 AAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLIIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAF 275
BLAST of CN186589 vs. ExPASy Swiss-Prot
Match: RLA0_RAT (60S acidic ribosomal protein P0 OS=Rattus norvegicus GN=Rplp0 PE=1 SV=2) HSP 1 Score: 196.052 bits (497), Expect = 2.017e-49 Identity = 92/167 (55.09%), Postives = 125/167 (74.85%), Query Frame = -2 Query: 269 APARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQADKVKEYLADPSKF 769 A AR G +AP +V VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LI+ GDKVG+SEA LL L I PFS+GL++Q V++NGS+YSPEVLD++E L +F V V ++ L I YPT+A+ PH +N YK V+A+++ T+Y+FP A+KVK +LADPS F Sbjct: 109 AAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLIIQQVFDNGSIYSPEVLDITEQALHTRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAF 275
BLAST of CN186589 vs. ExPASy Swiss-Prot
Match: RLA0_MOUSE (60S acidic ribosomal protein P0 OS=Mus musculus GN=Rplp0 PE=1 SV=3) HSP 1 Score: 194.897 bits (494), Expect = 4.493e-49 Identity = 91/167 (54.49%), Postives = 124/167 (74.25%), Query Frame = -2 Query: 269 APARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQADKVKEYLADPSKF 769 A AR G +AP +V VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LI+ GDKVG+SEA LL L I PFS+GL++Q V++NGS+Y+PEVLD++E L +F V V ++ L I YPT+A+ PH +N YK V+A+++ TEY+FP +KVK +LADPS F Sbjct: 109 AAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLIIQQVFDNGSIYNPEVLDITEQALHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETEYTFPLTEKVKAFLADPSAF 275 The following BLAST results are available for this feature:
BLAST of CN186589 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186589 ID=CN186589; Name=CN186589; organism=Citrus sinensis; type=EST; length=812bpback to top |