CN186589
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN186589 vs. ExPASy Swiss-Prot
Match: RLA0_SCHPO (60S acidic ribosomal protein P0 OS=Schizosaccharomyces pombe GN=rpp0 PE=2 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 1.001e-48 Identity = 91/167 (54.49%), Postives = 125/167 (74.85%), Query Frame = -2 Query: 269 APARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQADKVKEYLADPSKF 769 APAR +AP+DV VP GNTG++P +TSFFQ L IPTKI +GT+EI + V L+ K KVG SEA LL L I PF+YG+ V ++Y+ G+V+SPE+LD+SE+DL+ S+ S++TA++L +YPT+ + H VNAYKN+VAV+LATEY+F ++ K +LADPS F Sbjct: 107 APARPNAIAPLDVFVPAGNTGMEPGKTSFFQALGIPTKITRGTIEITSDVHLVSKDAKVGPSEATLLNMLNISPFTYGMDVLTIYDQGNVFSPEILDVSEEDLIGHLLSAASIITAISLGANYPTILSVMHSVVNAYKNLVAVSLATEYTFEGTEQTKAFLADPSAF 273
BLAST of CN186589 vs. ExPASy Swiss-Prot
Match: RLA0L_HUMAN (60S acidic ribosomal protein P0-like OS=Homo sapiens PE=1 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 4.967e-48 Identity = 90/167 (53.89%), Postives = 123/167 (73.65%), Query Frame = -2 Query: 269 APARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQADKVKEYLADPSKF 769 A AR G +AP +V VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LI+ GDKVG+SEA LL L I PFS+GLV+Q V++NGS+Y+PEVLD +E+ L +F V V ++ L YPT+A+ PH +N YK V+A+++ T+Y+FP A+ VK +LADPS F Sbjct: 109 AAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDKTEETLHSRFLEGVRNVASVCLQTGYPTVASVPHSIINGYKRVLALSVETDYTFPLAENVKAFLADPSAF 275
BLAST of CN186589 vs. ExPASy Swiss-Prot
Match: RLA0_PODAN (60S acidic ribosomal protein P0 OS=Podospora anserina PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 3.332e-44 Identity = 80/167 (47.90%), Postives = 124/167 (74.25%), Query Frame = -2 Query: 269 APARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQADKVKEYLADPSKF 769 APAR G VAP+DV +P GNTG++P +TSFFQ L +PTKI +GT+EI T ++L+ G KVG SEA LL L I PF+YG+ + VY+ G+ + VLD+SE+ L++ F+S+++ + A++LA+++PTL + H VN+YK V+AVA+ TE S+P+ +++K+ +A+P + Sbjct: 107 APARAGAVAPVDVWIPAGNTGMEPGKTSFFQALGVPTKIARGTIEITTDLKLVEAGAKVGPSEATLLNMLNISPFTYGMGIAQVYDQGNTFPSSVLDISEEQLLKAFSSAITTIAAVSLALNFPTLPSVIHSLVNSYKKVLAVAIETEISWPEIEELKDRIANPEAY 273
BLAST of CN186589 vs. ExPASy Swiss-Prot
Match: RLA0_NEUCR (60S acidic ribosomal protein P0 OS=Neurospora crassa GN=crpp0 PE=2 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 9.695e-44 Identity = 79/167 (47.31%), Postives = 124/167 (74.25%), Query Frame = -2 Query: 269 APARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQADKVKEYLADPSKF 769 APAR G +AP DV +P GNTG++P +TSFFQ L +PTKI +GT+EI T ++L+ G KVG SEA LL L I PF+YG+ + VY+ G+ + +VLD+SE+ L++ F+++++ + +L+LA+++PTL + H VNAYK V+AVA+ TE S+P+ +++K+ +A+P + Sbjct: 107 APARAGAIAPADVWIPAGNTGMEPGKTSFFQALGVPTKIARGTIEITTDLKLVEAGAKVGPSEATLLNMLNISPFTYGMGIAQVYDQGNTFPSDVLDISEEQLLKAFSTAITTIASLSLALNFPTLPSVIHSVVNAYKKVLAVAIETEISWPEIEELKDRIANPEAY 273
BLAST of CN186589 vs. ExPASy Swiss-Prot
Match: RLA0_EIMTE (60S acidic ribosomal protein P0 OS=Eimeria tenella PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 5.320e-42 Identity = 80/167 (47.90%), Postives = 117/167 (70.06%), Query Frame = -2 Query: 269 APARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQADKVKEYLADPSKF 769 APA+ G+ AP DV +P G TG+DP T FFQ L I TKI KG +EI V+LIR+G++V +S A LL KL ++PF+YGL V+ VY+NGSVYS VLD++++ ++E FA+ + V A++ A+ P+ AAAPH + A++N A+ L T + FPQ ++KE + +P+ F Sbjct: 108 APAKQGVTAPTDVFIPAGPTGMDPGSTGFFQALGISTKIVKGQIEIQQAVQLIRRGERVSASAATLLHKLSVKPFTYGLKVEHVYDNGSVYSASVLDITDEQILEAFAAGAANVAAVSRAVGLPSAAAAPHSILEAFRNCAALCLDTPFCFPQMQRLKEMVENPAAF 274
BLAST of CN186589 vs. ExPASy Swiss-Prot
Match: RLA0_YEAST (60S acidic ribosomal protein P0 OS=Saccharomyces cerevisiae GN=RPP0 PE=1 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.185e-41 Identity = 77/167 (46.11%), Postives = 120/167 (71.86%), Query Frame = -2 Query: 269 APARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQADKVKEYLADPSKF 769 APAR G VAP D+ V NTG++P +TSFFQ L +PTKI +GT+EI++ V+++ G+KVG SEA+LL L I PF++GL V VY+NG V+ +LD+++++LV F S+VS + +++LAI YPTL + H +N YK+++AVA+A Y +P+ + + + + +P K+ Sbjct: 107 APARAGAVAPEDIWVRAVNTGMEPGKTSFFQALGVPTKIARGTIEIVSDVKVVDAGNKVGQSEASLLNLLNISPFTFGLTVVQVYDNGQVFPSSILDITDEELVSHFVSAVSTIASISLAIGYPTLPSVGHTLINNYKDLLAVAIAASYHYPEIEDLVDRIENPEKY 273
BLAST of CN186589 vs. ExPASy Swiss-Prot
Match: RLA0_DICDI (60S acidic ribosomal protein P0 OS=Dictyostelium discoideum GN=rplp0 PE=1 SV=2) HSP 1 Score: 167.933 bits (424), Expect = 5.882e-41 Identity = 78/163 (47.85%), Postives = 115/163 (70.55%), Query Frame = -2 Query: 284 GAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQADKVKEYLA 772 GAPA+ G+ AP DV++P G TG++P+QTSF Q L I TKIN+G ++I+ V +I+ G KVG+SEA LL KL I+PF+YGL + +Y+ G+ YSP + SE+DL+ KF + + A++L I YPT+A+ PH +NA+KN++A++ T Y+F A+K K A Sbjct: 107 GAPAKAGVFAPNDVIIPAGPTGMEPTQTSFLQDLKIATKINRGQIDIVNEVHIIKTGQKVGASEATLLQKLNIKPFTYGLEPKIIYDAGACYSPSI---SEEDLINKFKQGIFNIAAISLEIGYPTVASIPHSVMNAFKNLLAISFETSYTFDAAEKFKSAAA 266
BLAST of CN186589 vs. ExPASy Swiss-Prot
Match: RLA0_PLAF8 (60S acidic ribosomal protein P0 OS=Plasmodium falciparum (isolate 7G8) GN=RPLP0 PE=2 SV=2) HSP 1 Score: 162.155 bits (409), Expect = 3.227e-39 Identity = 79/166 (47.59%), Postives = 120/166 (72.29%), Query Frame = -2 Query: 269 PARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQADKVKEYLADPSKF 766 PAR+G++APIDV +PPG TG+DPS TSF + L I TKI KG +EI V LI++G+KV +S A LL K + P SYG+ V++VY++G +Y +VLD++++D++EKF+ VS V AL+ A T A+ PH+FV A+KN+VA+ + ++Y+FP +K+++ +P F Sbjct: 111 PARLGVIAPIDVFIPPGPTGMDPSHTSFLESLGISTKIVKGQIEIQEHVHLIKQGEKVTASSATLLRKFNMNP-SYGVDVRTVYDDGVIYDAKVLDITDEDILEKFSKGVSNVAALSRATGVITEASYPHVFVEAFKNIVALIIDSDYTFPLMKILKKWVENPEAF 275
BLAST of CN186589 vs. ExPASy Swiss-Prot
Match: RLA0_TRYCR (60S acidic ribosomal protein P0 OS=Trypanosoma cruzi PE=2 SV=2) HSP 1 Score: 151.754 bits (382), Expect = 4.362e-36 Identity = 78/156 (50.00%), Postives = 108/156 (69.23%), Query Frame = -2 Query: 305 APARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKF-ASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQAD 769 APARVG +AP DV+VP GNTG++P TSFFQ LNI TKI KGTVEI++ +++ GD+V +S A LL KL I PF Y + VQSV++ G ++ E L ++ DD+VEK+ +S V AL+L PT A PHM ++A+K ++ ++ATEY F + D Sbjct: 116 APARVGAIAPCDVIVPAGNTGMEPKATSFFQALNIATKIAKGTVEIVSDKKVLSVGDRVDNSTATLLQKLDISPFYYQVEVQSVWDRGMLFLREDLSIT-DDVVEKYLLEGISNVAALSLGAGIPTAATLPHMIMDAFKTLLGASVATEYEFDEFD 270
BLAST of CN186589 vs. ExPASy Swiss-Prot
Match: RLA0_LEICH (60S acidic ribosomal protein P0 OS=Leishmania chagasi GN=LCP0 PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 4.991e-32 Identity = 74/153 (48.37%), Postives = 104/153 (67.97%), Query Frame = -2 Query: 311 APARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQ 769 APARVG + P DVVVP G+TG++P+QTSFFQ LNI TKI KG VEI+T +++ GDKV +S A LL KL I PF Y + V SV++ G +++ E L ++ED + + +S V A+AL PT + M V+A+KN++AV++AT Y F + Sbjct: 116 APARVGAI-PCDVVVPAGSTGMEPTQTSFFQALNIATKIAKGMVEIVTEKKVLSVGDKVDNSTATLLQKLNISPFYYQVNVLSVWDRGVLFTREDLMMTEDMVEKMLMEGLSNVAAMALGAGIPTSSTIGPMLVDAFKNLLAVSVATSYEFEE 267 The following BLAST results are available for this feature:
BLAST of CN186589 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN186589 ID=CN186589; Name=CN186589; organism=Citrus sinensis; type=EST; length=812bpback to top |